Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00655 and CA264_00660 are separated by 300 nucleotides CA264_00660 and CA264_00665 overlap by 10 nucleotides CA264_00665 and CA264_00670 are separated by 184 nucleotides
CA264_00655: CA264_00655 - tRNA-guanine(34) transglycosylase, at 144,271 to 145,401
_00655
CA264_00660: CA264_00660 - hypothetical protein, at 145,702 to 146,778
_00660
CA264_00665: CA264_00665 - RNA polymerase subunit sigma-24, at 146,769 to 147,377
_00665
CA264_00670: CA264_00670 - hypothetical protein, at 147,562 to 147,783
_00670
Position (kb)
145
146
147 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 144.707 kb on + strand, within CA264_00655 at 144.707 kb on + strand, within CA264_00655 at 144.708 kb on - strand, within CA264_00655 at 144.809 kb on + strand, within CA264_00655 at 144.810 kb on - strand, within CA264_00655 at 144.810 kb on - strand, within CA264_00655 at 144.854 kb on + strand, within CA264_00655 at 144.854 kb on + strand, within CA264_00655 at 144.919 kb on - strand, within CA264_00655 at 145.038 kb on + strand, within CA264_00655 at 145.109 kb on - strand, within CA264_00655 at 145.109 kb on - strand, within CA264_00655 at 145.135 kb on + strand, within CA264_00655 at 145.136 kb on - strand, within CA264_00655 at 145.136 kb on - strand, within CA264_00655 at 145.208 kb on + strand, within CA264_00655 at 145.209 kb on - strand, within CA264_00655 at 145.210 kb on + strand, within CA264_00655 at 145.210 kb on + strand, within CA264_00655 at 145.211 kb on - strand, within CA264_00655 at 145.218 kb on - strand, within CA264_00655 at 145.308 kb on + strand at 145.407 kb on + strand at 145.408 kb on - strand at 145.470 kb on + strand at 145.471 kb on - strand at 145.511 kb on - strand at 145.511 kb on - strand at 145.517 kb on + strand at 145.572 kb on + strand at 145.573 kb on - strand at 145.575 kb on - strand at 145.575 kb on - strand at 145.583 kb on + strand at 145.638 kb on - strand at 145.638 kb on - strand at 145.673 kb on - strand at 145.673 kb on - strand at 145.687 kb on - strand at 145.687 kb on - strand at 145.728 kb on - strand at 145.728 kb on - strand at 145.729 kb on + strand at 145.730 kb on - strand at 145.931 kb on - strand, within CA264_00660 at 145.931 kb on - strand, within CA264_00660 at 145.931 kb on - strand, within CA264_00660 at 145.931 kb on - strand, within CA264_00660 at 145.937 kb on - strand, within CA264_00660 at 145.937 kb on - strand, within CA264_00660 at 145.937 kb on - strand, within CA264_00660 at 146.123 kb on - strand, within CA264_00660 at 146.258 kb on - strand, within CA264_00660 at 146.285 kb on - strand, within CA264_00660 at 146.285 kb on - strand, within CA264_00660 at 146.285 kb on - strand, within CA264_00660 at 146.337 kb on - strand, within CA264_00660 at 146.383 kb on - strand, within CA264_00660 at 146.383 kb on - strand, within CA264_00660 at 146.392 kb on - strand, within CA264_00660 at 146.395 kb on - strand, within CA264_00660 at 146.395 kb on - strand, within CA264_00660 at 146.395 kb on - strand, within CA264_00660 at 146.428 kb on - strand, within CA264_00660 at 146.529 kb on + strand, within CA264_00660 at 146.542 kb on - strand, within CA264_00660 at 146.555 kb on + strand, within CA264_00660 at 146.579 kb on + strand, within CA264_00660 at 146.580 kb on - strand, within CA264_00660 at 146.592 kb on - strand, within CA264_00660 at 146.592 kb on - strand, within CA264_00660 at 146.592 kb on - strand, within CA264_00660 at 146.592 kb on - strand, within CA264_00660 at 146.601 kb on - strand, within CA264_00660 at 146.624 kb on - strand, within CA264_00660 at 146.667 kb on - strand, within CA264_00660 at 146.750 kb on + strand at 146.756 kb on - strand at 146.780 kb on + strand at 146.780 kb on + strand at 146.819 kb on - strand at 146.834 kb on - strand, within CA264_00665 at 146.874 kb on - strand, within CA264_00665 at 146.878 kb on - strand, within CA264_00665 at 146.981 kb on + strand, within CA264_00665 at 146.981 kb on + strand, within CA264_00665 at 146.982 kb on - strand, within CA264_00665 at 146.982 kb on - strand, within CA264_00665 at 146.982 kb on - strand, within CA264_00665 at 146.982 kb on - strand, within CA264_00665 at 147.008 kb on + strand, within CA264_00665 at 147.009 kb on - strand, within CA264_00665 at 147.009 kb on - strand, within CA264_00665 at 147.041 kb on + strand, within CA264_00665 at 147.188 kb on + strand, within CA264_00665 at 147.189 kb on - strand, within CA264_00665 at 147.223 kb on - strand, within CA264_00665 at 147.343 kb on - strand at 147.396 kb on + strand at 147.397 kb on - strand at 147.397 kb on - strand at 147.448 kb on - strand at 147.449 kb on + strand at 147.449 kb on + strand at 147.450 kb on - strand at 147.450 kb on - strand at 147.453 kb on + strand at 147.453 kb on + strand at 147.454 kb on - strand at 147.478 kb on + strand at 147.491 kb on + strand at 147.492 kb on - strand at 147.503 kb on + strand at 147.504 kb on - strand at 147.527 kb on + strand at 147.527 kb on + strand at 147.528 kb on - strand at 147.529 kb on + strand at 147.557 kb on + strand at 147.558 kb on - strand at 147.558 kb on - strand at 147.558 kb on - strand at 147.558 kb on - strand at 147.559 kb on + strand at 147.560 kb on - strand at 147.560 kb on - strand at 147.560 kb on - strand at 147.573 kb on - strand at 147.585 kb on + strand, within CA264_00670 at 147.585 kb on + strand, within CA264_00670 at 147.585 kb on + strand, within CA264_00670 at 147.586 kb on - strand, within CA264_00670 at 147.587 kb on + strand, within CA264_00670 at 147.587 kb on + strand, within CA264_00670 at 147.588 kb on - strand, within CA264_00670 at 147.593 kb on + strand, within CA264_00670 at 147.593 kb on + strand, within CA264_00670 at 147.593 kb on + strand, within CA264_00670 at 147.594 kb on - strand, within CA264_00670 at 147.594 kb on - strand, within CA264_00670 at 147.594 kb on - strand, within CA264_00670 at 147.594 kb on - strand, within CA264_00670 at 147.594 kb on - strand, within CA264_00670 at 147.599 kb on + strand, within CA264_00670 at 147.610 kb on + strand, within CA264_00670 at 147.627 kb on + strand, within CA264_00670 at 147.657 kb on + strand, within CA264_00670 at 147.667 kb on + strand, within CA264_00670 at 147.730 kb on - strand, within CA264_00670 at 147.730 kb on - strand, within CA264_00670 at 147.732 kb on - strand, within CA264_00670 at 147.732 kb on - strand, within CA264_00670 at 147.732 kb on - strand, within CA264_00670 at 147.732 kb on - strand, within CA264_00670
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 144,707 + CA264_00655 0.39 -0.8 144,707 + CA264_00655 0.39 -0.4 144,708 - CA264_00655 0.39 -0.4 144,809 + CA264_00655 0.48 -2.2 144,810 - CA264_00655 0.48 -0.4 144,810 - CA264_00655 0.48 -0.9 144,854 + CA264_00655 0.52 -2.1 144,854 + CA264_00655 0.52 +0.0 144,919 - CA264_00655 0.57 -0.4 145,038 + CA264_00655 0.68 +0.8 145,109 - CA264_00655 0.74 -1.8 145,109 - CA264_00655 0.74 +1.8 145,135 + CA264_00655 0.76 -0.3 145,136 - CA264_00655 0.76 -0.5 145,136 - CA264_00655 0.76 -1.1 145,208 + CA264_00655 0.83 -0.2 145,209 - CA264_00655 0.83 -0.7 145,210 + CA264_00655 0.83 +0.6 145,210 + CA264_00655 0.83 -1.3 145,211 - CA264_00655 0.83 -0.3 145,218 - CA264_00655 0.84 -2.6 145,308 + -0.5 145,407 + -0.2 145,408 - +1.1 145,470 + -0.2 145,471 - -0.5 145,511 - -1.1 145,511 - -2.6 145,517 + +0.7 145,572 + +0.8 145,573 - +0.3 145,575 - +1.0 145,575 - +1.1 145,583 + -0.0 145,638 - +0.1 145,638 - +1.8 145,673 - -0.4 145,673 - +0.1 145,687 - -1.7 145,687 - -0.9 145,728 - -0.9 145,728 - -0.6 145,729 + -0.8 145,730 - -2.7 145,931 - CA264_00660 0.21 -2.6 145,931 - CA264_00660 0.21 -1.9 145,931 - CA264_00660 0.21 -2.7 145,931 - CA264_00660 0.21 -2.5 145,937 - CA264_00660 0.22 -2.6 145,937 - CA264_00660 0.22 -2.3 145,937 - CA264_00660 0.22 -1.4 146,123 - CA264_00660 0.39 -2.0 146,258 - CA264_00660 0.52 -2.0 146,285 - CA264_00660 0.54 -1.4 146,285 - CA264_00660 0.54 -1.7 146,285 - CA264_00660 0.54 -1.9 146,337 - CA264_00660 0.59 -1.3 146,383 - CA264_00660 0.63 -3.1 146,383 - CA264_00660 0.63 -2.1 146,392 - CA264_00660 0.64 +0.1 146,395 - CA264_00660 0.64 -0.4 146,395 - CA264_00660 0.64 -1.8 146,395 - CA264_00660 0.64 -2.2 146,428 - CA264_00660 0.67 -3.5 146,529 + CA264_00660 0.77 -1.0 146,542 - CA264_00660 0.78 -1.1 146,555 + CA264_00660 0.79 +1.5 146,579 + CA264_00660 0.81 -0.6 146,580 - CA264_00660 0.82 -0.5 146,592 - CA264_00660 0.83 +0.2 146,592 - CA264_00660 0.83 -1.2 146,592 - CA264_00660 0.83 -1.4 146,592 - CA264_00660 0.83 -0.1 146,601 - CA264_00660 0.83 -0.6 146,624 - CA264_00660 0.86 -2.2 146,667 - CA264_00660 0.90 -0.3 146,750 + -1.3 146,756 - -0.4 146,780 + -0.2 146,780 + -1.2 146,819 - -0.7 146,834 - CA264_00665 0.11 -0.5 146,874 - CA264_00665 0.17 -0.9 146,878 - CA264_00665 0.18 -0.1 146,981 + CA264_00665 0.35 -0.4 146,981 + CA264_00665 0.35 -0.3 146,982 - CA264_00665 0.35 +1.3 146,982 - CA264_00665 0.35 -0.4 146,982 - CA264_00665 0.35 -1.4 146,982 - CA264_00665 0.35 -0.2 147,008 + CA264_00665 0.39 -0.9 147,009 - CA264_00665 0.39 +0.1 147,009 - CA264_00665 0.39 -0.4 147,041 + CA264_00665 0.45 -0.5 147,188 + CA264_00665 0.69 -1.4 147,189 - CA264_00665 0.69 +0.1 147,223 - CA264_00665 0.75 -0.5 147,343 - -0.3 147,396 + +0.6 147,397 - +1.1 147,397 - -0.5 147,448 - +0.9 147,449 + -0.9 147,449 + -0.3 147,450 - +1.8 147,450 - +0.2 147,453 + -1.1 147,453 + -0.7 147,454 - -0.0 147,478 + +0.4 147,491 + -0.1 147,492 - +0.6 147,503 + +1.6 147,504 - +0.1 147,527 + -1.6 147,527 + -0.7 147,528 - +0.1 147,529 + -0.4 147,557 + +0.3 147,558 - -0.3 147,558 - +0.4 147,558 - -0.4 147,558 - +0.4 147,559 + +0.2 147,560 - -0.7 147,560 - -0.0 147,560 - +0.4 147,573 - +0.1 147,585 + CA264_00670 0.10 +0.2 147,585 + CA264_00670 0.10 -0.7 147,585 + CA264_00670 0.10 +0.9 147,586 - CA264_00670 0.11 -0.8 147,587 + CA264_00670 0.11 -0.6 147,587 + CA264_00670 0.11 -0.2 147,588 - CA264_00670 0.12 +0.4 147,593 + CA264_00670 0.14 +2.6 147,593 + CA264_00670 0.14 -0.3 147,593 + CA264_00670 0.14 -0.1 147,594 - CA264_00670 0.14 -0.1 147,594 - CA264_00670 0.14 +1.4 147,594 - CA264_00670 0.14 -0.0 147,594 - CA264_00670 0.14 -0.2 147,594 - CA264_00670 0.14 +0.1 147,599 + CA264_00670 0.17 +0.3 147,610 + CA264_00670 0.22 -0.5 147,627 + CA264_00670 0.29 -0.3 147,657 + CA264_00670 0.43 +0.8 147,667 + CA264_00670 0.47 -0.4 147,730 - CA264_00670 0.76 +0.7 147,730 - CA264_00670 0.76 +0.0 147,732 - CA264_00670 0.77 +1.0 147,732 - CA264_00670 0.77 -0.6 147,732 - CA264_00670 0.77 -0.4 147,732 - CA264_00670 0.77 +0.3
Or see this region's nucleotide sequence