Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00175 and CA264_00180 are separated by 94 nucleotides CA264_00180 and CA264_00185 are separated by 624 nucleotides
CA264_00175: CA264_00175 - branched chain amino acid aminotransferase, at 43,302 to 44,375
_00175
CA264_00180: CA264_00180 - peptide chain release factor 2, at 44,470 to 45,547
_00180
CA264_00185: CA264_00185 - SusC/RagA family TonB-linked outer membrane protein, at 46,172 to 49,366
_00185
Position (kb) 44
45
46 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 43.487 kb on + strand, within CA264_00175 at 43.488 kb on - strand, within CA264_00175 at 43.536 kb on + strand, within CA264_00175 at 43.537 kb on - strand, within CA264_00175 at 43.537 kb on - strand, within CA264_00175 at 43.716 kb on + strand, within CA264_00175 at 43.716 kb on + strand, within CA264_00175 at 43.716 kb on + strand, within CA264_00175 at 43.717 kb on - strand, within CA264_00175 at 43.717 kb on - strand, within CA264_00175 at 43.717 kb on - strand, within CA264_00175 at 43.730 kb on + strand, within CA264_00175 at 43.815 kb on + strand, within CA264_00175 at 43.816 kb on - strand, within CA264_00175 at 43.840 kb on + strand, within CA264_00175 at 43.986 kb on + strand, within CA264_00175 at 44.015 kb on - strand, within CA264_00175 at 44.015 kb on - strand, within CA264_00175 at 44.015 kb on - strand, within CA264_00175 at 44.043 kb on - strand, within CA264_00175 at 44.043 kb on - strand, within CA264_00175 at 44.043 kb on - strand, within CA264_00175 at 44.092 kb on + strand, within CA264_00175 at 44.093 kb on - strand, within CA264_00175 at 44.126 kb on - strand, within CA264_00175 at 44.126 kb on - strand, within CA264_00175 at 44.141 kb on - strand, within CA264_00175 at 44.228 kb on - strand, within CA264_00175 at 44.228 kb on - strand, within CA264_00175 at 44.241 kb on + strand, within CA264_00175 at 44.242 kb on - strand, within CA264_00175 at 44.253 kb on + strand, within CA264_00175 at 44.288 kb on - strand at 44.373 kb on + strand at 44.378 kb on + strand at 44.381 kb on + strand at 44.385 kb on + strand at 44.386 kb on - strand at 44.387 kb on + strand at 44.388 kb on - strand at 44.388 kb on - strand at 44.407 kb on + strand at 44.407 kb on + strand at 44.408 kb on - strand at 44.409 kb on + strand at 44.410 kb on - strand at 44.410 kb on - strand at 44.410 kb on - strand at 44.422 kb on - strand at 44.422 kb on - strand at 44.423 kb on + strand at 44.453 kb on + strand at 44.454 kb on - strand at 44.454 kb on - strand at 44.454 kb on - strand at 44.454 kb on - strand at 44.455 kb on + strand at 44.463 kb on + strand at 45.585 kb on + strand at 45.586 kb on - strand at 45.586 kb on - strand at 45.606 kb on - strand at 45.606 kb on - strand at 45.608 kb on - strand at 45.639 kb on - strand at 45.697 kb on + strand at 45.717 kb on + strand at 45.718 kb on - strand at 45.735 kb on + strand at 45.740 kb on + strand at 45.791 kb on - strand at 45.792 kb on + strand at 45.865 kb on + strand at 45.866 kb on - strand at 45.877 kb on + strand at 45.877 kb on + strand at 45.881 kb on - strand at 45.904 kb on - strand at 45.911 kb on + strand at 45.911 kb on + strand at 45.911 kb on + strand at 45.933 kb on - strand at 45.942 kb on - strand at 45.989 kb on - strand at 45.999 kb on + strand at 45.999 kb on + strand at 45.999 kb on + strand at 46.056 kb on - strand at 46.157 kb on - strand at 46.169 kb on + strand at 46.182 kb on + strand at 46.260 kb on + strand at 46.316 kb on - strand at 46.378 kb on + strand at 46.387 kb on + strand at 46.387 kb on + strand at 46.516 kb on + strand, within CA264_00185
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 43,487 + CA264_00175 0.17 -0.7 43,488 - CA264_00175 0.17 +0.4 43,536 + CA264_00175 0.22 +0.0 43,537 - CA264_00175 0.22 +1.3 43,537 - CA264_00175 0.22 -0.2 43,716 + CA264_00175 0.39 -0.5 43,716 + CA264_00175 0.39 -0.5 43,716 + CA264_00175 0.39 -0.7 43,717 - CA264_00175 0.39 -0.9 43,717 - CA264_00175 0.39 +0.5 43,717 - CA264_00175 0.39 +0.1 43,730 + CA264_00175 0.40 -0.4 43,815 + CA264_00175 0.48 -1.0 43,816 - CA264_00175 0.48 +0.3 43,840 + CA264_00175 0.50 +0.3 43,986 + CA264_00175 0.64 -0.0 44,015 - CA264_00175 0.66 +0.3 44,015 - CA264_00175 0.66 +0.4 44,015 - CA264_00175 0.66 +0.4 44,043 - CA264_00175 0.69 +0.1 44,043 - CA264_00175 0.69 +1.8 44,043 - CA264_00175 0.69 -0.6 44,092 + CA264_00175 0.74 -0.3 44,093 - CA264_00175 0.74 -0.1 44,126 - CA264_00175 0.77 +0.8 44,126 - CA264_00175 0.77 -0.0 44,141 - CA264_00175 0.78 +0.8 44,228 - CA264_00175 0.86 +0.6 44,228 - CA264_00175 0.86 +0.5 44,241 + CA264_00175 0.87 -1.3 44,242 - CA264_00175 0.88 +0.0 44,253 + CA264_00175 0.89 -0.2 44,288 - -0.5 44,373 + -0.4 44,378 + +1.8 44,381 + +0.2 44,385 + -1.1 44,386 - +0.2 44,387 + -0.3 44,388 - -0.7 44,388 - -0.4 44,407 + -0.3 44,407 + -0.0 44,408 - +0.7 44,409 + +0.3 44,410 - -0.4 44,410 - -1.4 44,410 - +0.1 44,422 - -0.1 44,422 - -0.3 44,423 + -0.7 44,453 + -0.2 44,454 - -1.3 44,454 - -0.4 44,454 - -0.6 44,454 - -0.1 44,455 + +0.3 44,463 + -0.3 45,585 + +1.6 45,586 - +0.4 45,586 - +0.1 45,606 - +1.2 45,606 - -0.4 45,608 - -0.1 45,639 - +0.2 45,697 + +1.8 45,717 + +1.6 45,718 - -0.2 45,735 + +1.2 45,740 + +2.2 45,791 - -0.2 45,792 + +2.4 45,865 + +3.5 45,866 - +0.2 45,877 + +2.7 45,877 + +2.5 45,881 - +1.1 45,904 - +1.4 45,911 + +2.6 45,911 + +3.8 45,911 + +1.3 45,933 - -0.3 45,942 - +0.6 45,989 - +0.9 45,999 + +2.6 45,999 + +3.6 45,999 + +2.3 46,056 - +1.5 46,157 - +1.4 46,169 + +0.6 46,182 + -0.1 46,260 + +0.5 46,316 - -0.6 46,378 + +0.5 46,387 + +1.3 46,387 + -0.1 46,516 + CA264_00185 0.11 +0.5
Or see this region's nucleotide sequence