Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00140 and CA264_00145 are separated by 165 nucleotides CA264_00145 and CA264_00150 are separated by 107 nucleotides CA264_00150 and CA264_00155 overlap by 59 nucleotides CA264_00155 and CA264_00160 are separated by 130 nucleotides
CA264_00140: CA264_00140 - hypothetical protein, at 36,696 to 36,908
_00140
CA264_00145: CA264_00145 - DNA mismatch repair protein MutT, at 37,074 to 37,637
_00145
CA264_00150: CA264_00150 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 37,745 to 38,551
_00150
CA264_00155: CA264_00155 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, at 38,493 to 38,780
_00155
CA264_00160: CA264_00160 - hypothetical protein, at 38,911 to 41,952
_00160
Position (kb) 37
38
39 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 36.748 kb on + strand, within CA264_00140 at 36.749 kb on - strand, within CA264_00140 at 36.749 kb on - strand, within CA264_00140 at 36.753 kb on - strand, within CA264_00140 at 36.753 kb on - strand, within CA264_00140 at 36.773 kb on - strand, within CA264_00140 at 36.791 kb on - strand, within CA264_00140 at 36.819 kb on + strand, within CA264_00140 at 36.868 kb on + strand, within CA264_00140 at 36.920 kb on - strand at 36.932 kb on + strand at 36.932 kb on + strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.934 kb on + strand at 36.935 kb on - strand at 36.965 kb on + strand at 36.965 kb on + strand at 36.965 kb on + strand at 36.966 kb on - strand at 36.966 kb on - strand at 37.023 kb on - strand at 37.059 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.069 kb on + strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.074 kb on - strand at 37.142 kb on - strand, within CA264_00145 at 37.199 kb on - strand, within CA264_00145 at 37.252 kb on - strand, within CA264_00145 at 37.253 kb on + strand, within CA264_00145 at 37.253 kb on + strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.257 kb on + strand, within CA264_00145 at 37.273 kb on - strand, within CA264_00145 at 37.294 kb on - strand, within CA264_00145 at 37.306 kb on + strand, within CA264_00145 at 37.307 kb on - strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.471 kb on + strand, within CA264_00145 at 37.569 kb on - strand, within CA264_00145 at 37.636 kb on - strand at 37.636 kb on - strand at 37.673 kb on + strand at 37.673 kb on + strand at 37.673 kb on + strand at 37.675 kb on + strand at 37.713 kb on + strand at 37.714 kb on - strand at 37.760 kb on + strand at 37.779 kb on - strand at 37.779 kb on - strand at 37.821 kb on + strand at 37.868 kb on - strand, within CA264_00150 at 37.871 kb on + strand, within CA264_00150 at 37.884 kb on + strand, within CA264_00150 at 37.999 kb on + strand, within CA264_00150 at 38.000 kb on + strand, within CA264_00150 at 38.000 kb on + strand, within CA264_00150 at 38.042 kb on - strand, within CA264_00150 at 38.045 kb on - strand, within CA264_00150 at 38.096 kb on + strand, within CA264_00150 at 38.119 kb on - strand, within CA264_00150 at 38.119 kb on - strand, within CA264_00150 at 38.158 kb on - strand, within CA264_00150 at 38.315 kb on + strand, within CA264_00150 at 38.358 kb on + strand, within CA264_00150 at 38.375 kb on - strand, within CA264_00150 at 38.482 kb on + strand at 38.486 kb on - strand at 38.486 kb on - strand at 38.795 kb on + strand at 38.809 kb on + strand at 38.883 kb on + strand at 39.008 kb on + strand at 39.008 kb on + strand at 39.008 kb on + strand at 39.009 kb on - strand at 39.010 kb on + strand at 39.010 kb on + strand at 39.117 kb on + strand at 39.155 kb on - strand at 39.176 kb on + strand at 39.313 kb on - strand, within CA264_00160 at 39.323 kb on + strand, within CA264_00160 at 39.368 kb on + strand, within CA264_00160 at 39.369 kb on - strand, within CA264_00160 at 39.372 kb on + strand, within CA264_00160 at 39.372 kb on + strand, within CA264_00160 at 39.372 kb on + strand, within CA264_00160 at 39.373 kb on - strand, within CA264_00160 at 39.373 kb on - strand, within CA264_00160 at 39.374 kb on + strand, within CA264_00160 at 39.375 kb on - strand, within CA264_00160 at 39.394 kb on - strand, within CA264_00160 at 39.397 kb on + strand, within CA264_00160 at 39.397 kb on + strand, within CA264_00160 at 39.397 kb on + strand, within CA264_00160 at 39.424 kb on - strand, within CA264_00160 at 39.488 kb on - strand, within CA264_00160 at 39.538 kb on + strand, within CA264_00160 at 39.539 kb on - strand, within CA264_00160
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 36,748 + CA264_00140 0.24 +1.5 36,749 - CA264_00140 0.25 +1.2 36,749 - CA264_00140 0.25 +0.8 36,753 - CA264_00140 0.27 -0.4 36,753 - CA264_00140 0.27 +0.1 36,773 - CA264_00140 0.36 -0.1 36,791 - CA264_00140 0.45 +0.1 36,819 + CA264_00140 0.58 +0.7 36,868 + CA264_00140 0.81 +1.1 36,920 - -0.3 36,932 + +1.4 36,932 + +1.1 36,933 - +1.4 36,933 - +1.2 36,933 - +0.4 36,933 - +0.9 36,934 + +0.7 36,935 - +0.6 36,965 + +1.0 36,965 + -0.2 36,965 + +1.0 36,966 - +0.6 36,966 - -0.1 37,023 - +1.3 37,059 + +0.4 37,068 + -0.2 37,068 + -0.2 37,068 + -0.5 37,068 + +1.2 37,068 + +2.2 37,068 + -0.6 37,069 + +0.9 37,069 - +0.6 37,069 - +0.6 37,069 - +0.6 37,069 - +0.2 37,074 - +0.4 37,142 - CA264_00145 0.12 -0.7 37,199 - CA264_00145 0.22 -0.7 37,252 - CA264_00145 0.32 +0.1 37,253 + CA264_00145 0.32 -0.6 37,253 + CA264_00145 0.32 +1.1 37,254 - CA264_00145 0.32 -0.2 37,254 - CA264_00145 0.32 -0.8 37,254 - CA264_00145 0.32 -0.4 37,254 - CA264_00145 0.32 -0.9 37,254 - CA264_00145 0.32 -0.4 37,254 - CA264_00145 0.32 -2.8 37,254 - CA264_00145 0.32 -1.7 37,257 + CA264_00145 0.32 +0.8 37,273 - CA264_00145 0.35 -0.4 37,294 - CA264_00145 0.39 -1.2 37,306 + CA264_00145 0.41 -0.9 37,307 - CA264_00145 0.41 -0.9 37,405 + CA264_00145 0.59 +0.5 37,405 + CA264_00145 0.59 +0.6 37,405 + CA264_00145 0.59 +0.4 37,405 + CA264_00145 0.59 +0.1 37,471 + CA264_00145 0.70 -0.5 37,569 - CA264_00145 0.88 +0.1 37,636 - +0.1 37,636 - -1.1 37,673 + +0.1 37,673 + +0.5 37,673 + +0.4 37,675 + -0.5 37,713 + +0.4 37,714 - +0.9 37,760 + -2.4 37,779 - -1.3 37,779 - -2.7 37,821 + -0.4 37,868 - CA264_00150 0.15 -1.7 37,871 + CA264_00150 0.16 -1.1 37,884 + CA264_00150 0.17 -1.1 37,999 + CA264_00150 0.31 -1.5 38,000 + CA264_00150 0.32 -1.5 38,000 + CA264_00150 0.32 -2.4 38,042 - CA264_00150 0.37 -1.1 38,045 - CA264_00150 0.37 +0.3 38,096 + CA264_00150 0.43 -1.6 38,119 - CA264_00150 0.46 -2.1 38,119 - CA264_00150 0.46 -0.9 38,158 - CA264_00150 0.51 -0.5 38,315 + CA264_00150 0.71 -0.0 38,358 + CA264_00150 0.76 -1.9 38,375 - CA264_00150 0.78 -1.5 38,482 + +0.2 38,486 - +0.1 38,486 - +0.0 38,795 + +0.1 38,809 + -0.7 38,883 + -0.4 39,008 + -1.7 39,008 + -1.9 39,008 + -2.2 39,009 - -0.7 39,010 + -2.0 39,010 + -0.5 39,117 + +0.1 39,155 - -0.4 39,176 + -0.8 39,313 - CA264_00160 0.13 -1.3 39,323 + CA264_00160 0.14 -1.1 39,368 + CA264_00160 0.15 -1.6 39,369 - CA264_00160 0.15 -1.7 39,372 + CA264_00160 0.15 -0.2 39,372 + CA264_00160 0.15 -1.6 39,372 + CA264_00160 0.15 -1.9 39,373 - CA264_00160 0.15 -3.4 39,373 - CA264_00160 0.15 -4.2 39,374 + CA264_00160 0.15 -1.4 39,375 - CA264_00160 0.15 -2.4 39,394 - CA264_00160 0.16 -1.7 39,397 + CA264_00160 0.16 -3.9 39,397 + CA264_00160 0.16 -0.2 39,397 + CA264_00160 0.16 -0.4 39,424 - CA264_00160 0.17 -1.3 39,488 - CA264_00160 0.19 -1.0 39,538 + CA264_00160 0.21 +1.1 39,539 - CA264_00160 0.21 -1.7
Or see this region's nucleotide sequence