Strain Fitness in Bosea sp. OAE506 around ABIE41_RS02800

Experiment: Sucrose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS02790 and ABIE41_RS02795 overlap by 4 nucleotidesABIE41_RS02795 and ABIE41_RS02800 overlap by 4 nucleotidesABIE41_RS02800 and ABIE41_RS02805 are separated by 31 nucleotidesABIE41_RS02805 and ABIE41_RS02810 are separated by 157 nucleotides ABIE41_RS02790: ABIE41_RS02790 - ABC transporter ATP-binding protein, at 571,979 to 573,691 _RS02790 ABIE41_RS02795: ABIE41_RS02795 - ABC transporter permease, at 573,688 to 574,584 _RS02795 ABIE41_RS02800: ABIE41_RS02800 - ABC transporter permease, at 574,581 to 575,555 _RS02800 ABIE41_RS02805: ABIE41_RS02805 - creatininase family protein, at 575,587 to 576,288 _RS02805 ABIE41_RS02810: ABIE41_RS02810 - MarR family winged helix-turn-helix transcriptional regulator, at 576,446 to 576,997 _RS02810 Position (kb) 574 575 576Strain fitness (log2 ratio) -2 -1 0 1 2 3at 573.639 kb on + strandat 573.639 kb on + strandat 573.639 kb on + strandat 573.639 kb on + strandat 573.639 kb on + strandat 573.639 kb on + strandat 573.640 kb on - strandat 573.640 kb on - strandat 573.640 kb on - strandat 573.779 kb on + strand, within ABIE41_RS02795at 573.780 kb on - strand, within ABIE41_RS02795at 573.780 kb on - strand, within ABIE41_RS02795at 573.794 kb on + strand, within ABIE41_RS02795at 573.812 kb on + strand, within ABIE41_RS02795at 573.812 kb on + strand, within ABIE41_RS02795at 573.812 kb on + strand, within ABIE41_RS02795at 573.813 kb on - strand, within ABIE41_RS02795at 573.813 kb on - strand, within ABIE41_RS02795at 573.813 kb on - strand, within ABIE41_RS02795at 574.019 kb on + strand, within ABIE41_RS02795at 574.020 kb on - strand, within ABIE41_RS02795at 574.020 kb on - strand, within ABIE41_RS02795at 574.071 kb on - strand, within ABIE41_RS02795at 574.071 kb on - strand, within ABIE41_RS02795at 574.071 kb on - strand, within ABIE41_RS02795at 574.071 kb on - strand, within ABIE41_RS02795at 574.076 kb on + strand, within ABIE41_RS02795at 574.076 kb on + strand, within ABIE41_RS02795at 574.076 kb on + strand, within ABIE41_RS02795at 574.077 kb on - strand, within ABIE41_RS02795at 574.077 kb on - strand, within ABIE41_RS02795at 574.077 kb on - strand, within ABIE41_RS02795at 574.077 kb on - strand, within ABIE41_RS02795at 574.220 kb on + strand, within ABIE41_RS02795at 574.221 kb on - strand, within ABIE41_RS02795at 574.307 kb on + strand, within ABIE41_RS02795at 574.307 kb on + strand, within ABIE41_RS02795at 574.308 kb on - strand, within ABIE41_RS02795at 574.308 kb on - strand, within ABIE41_RS02795at 574.308 kb on - strand, within ABIE41_RS02795at 574.365 kb on - strand, within ABIE41_RS02795at 574.431 kb on - strand, within ABIE41_RS02795at 574.431 kb on - strand, within ABIE41_RS02795at 574.432 kb on - strand, within ABIE41_RS02795at 574.624 kb on + strandat 574.625 kb on - strandat 574.625 kb on - strandat 574.681 kb on + strand, within ABIE41_RS02800at 574.681 kb on + strand, within ABIE41_RS02800at 574.681 kb on + strand, within ABIE41_RS02800at 575.203 kb on + strand, within ABIE41_RS02800at 575.203 kb on + strand, within ABIE41_RS02800at 575.203 kb on + strand, within ABIE41_RS02800at 575.203 kb on + strand, within ABIE41_RS02800at 575.203 kb on + strand, within ABIE41_RS02800at 575.203 kb on + strand, within ABIE41_RS02800at 575.203 kb on + strand, within ABIE41_RS02800at 575.204 kb on - strand, within ABIE41_RS02800at 575.204 kb on - strand, within ABIE41_RS02800at 575.204 kb on - strand, within ABIE41_RS02800at 575.365 kb on + strand, within ABIE41_RS02800at 575.365 kb on + strand, within ABIE41_RS02800at 575.365 kb on + strand, within ABIE41_RS02800at 575.365 kb on + strand, within ABIE41_RS02800at 575.366 kb on - strand, within ABIE41_RS02800at 575.366 kb on - strand, within ABIE41_RS02800at 575.374 kb on + strand, within ABIE41_RS02800at 575.374 kb on + strand, within ABIE41_RS02800at 575.374 kb on + strand, within ABIE41_RS02800at 575.396 kb on - strand, within ABIE41_RS02800at 575.473 kb on + strandat 575.473 kb on + strandat 575.544 kb on - strandat 575.551 kb on - strandat 575.551 kb on - strandat 575.551 kb on - strandat 576.002 kb on + strand, within ABIE41_RS02805at 576.002 kb on + strand, within ABIE41_RS02805at 576.002 kb on + strand, within ABIE41_RS02805at 576.002 kb on + strand, within ABIE41_RS02805at 576.002 kb on + strand, within ABIE41_RS02805at 576.003 kb on - strand, within ABIE41_RS02805at 576.038 kb on + strand, within ABIE41_RS02805at 576.038 kb on + strand, within ABIE41_RS02805at 576.038 kb on + strand, within ABIE41_RS02805at 576.038 kb on + strand, within ABIE41_RS02805at 576.038 kb on + strand, within ABIE41_RS02805at 576.038 kb on + strand, within ABIE41_RS02805at 576.038 kb on + strand, within ABIE41_RS02805at 576.038 kb on + strand, within ABIE41_RS02805at 576.038 kb on + strand, within ABIE41_RS02805at 576.038 kb on + strand, within ABIE41_RS02805at 576.039 kb on - strand, within ABIE41_RS02805at 576.039 kb on - strand, within ABIE41_RS02805at 576.039 kb on - strand, within ABIE41_RS02805at 576.039 kb on - strand, within ABIE41_RS02805at 576.039 kb on - strand, within ABIE41_RS02805at 576.039 kb on - strand, within ABIE41_RS02805at 576.039 kb on - strand, within ABIE41_RS02805at 576.039 kb on - strand, within ABIE41_RS02805at 576.039 kb on - strand, within ABIE41_RS02805at 576.039 kb on - strand, within ABIE41_RS02805at 576.039 kb on - strand, within ABIE41_RS02805at 576.072 kb on - strand, within ABIE41_RS02805at 576.098 kb on + strand, within ABIE41_RS02805at 576.098 kb on + strand, within ABIE41_RS02805at 576.098 kb on + strand, within ABIE41_RS02805at 576.099 kb on - strand, within ABIE41_RS02805at 576.191 kb on + strand, within ABIE41_RS02805at 576.192 kb on - strand, within ABIE41_RS02805at 576.192 kb on - strand, within ABIE41_RS02805at 576.192 kb on - strand, within ABIE41_RS02805at 576.192 kb on - strand, within ABIE41_RS02805at 576.304 kb on - strandat 576.311 kb on + strandat 576.311 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Sucrose (C)
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573,639 + +0.0
573,639 + +0.2
573,639 + +1.0
573,639 + +0.3
573,639 + +0.2
573,639 + +0.4
573,640 - +0.6
573,640 - +1.1
573,640 - +1.9
573,779 + ABIE41_RS02795 0.10 +0.6
573,780 - ABIE41_RS02795 0.10 -0.6
573,780 - ABIE41_RS02795 0.10 +0.5
573,794 + ABIE41_RS02795 0.12 +1.1
573,812 + ABIE41_RS02795 0.14 +0.9
573,812 + ABIE41_RS02795 0.14 +1.0
573,812 + ABIE41_RS02795 0.14 +0.4
573,813 - ABIE41_RS02795 0.14 +1.2
573,813 - ABIE41_RS02795 0.14 +0.8
573,813 - ABIE41_RS02795 0.14 +1.5
574,019 + ABIE41_RS02795 0.37 +1.8
574,020 - ABIE41_RS02795 0.37 +0.5
574,020 - ABIE41_RS02795 0.37 +0.3
574,071 - ABIE41_RS02795 0.43 +0.9
574,071 - ABIE41_RS02795 0.43 +0.7
574,071 - ABIE41_RS02795 0.43 -0.0
574,071 - ABIE41_RS02795 0.43 -0.3
574,076 + ABIE41_RS02795 0.43 -0.6
574,076 + ABIE41_RS02795 0.43 +0.3
574,076 + ABIE41_RS02795 0.43 +2.3
574,077 - ABIE41_RS02795 0.43 +1.4
574,077 - ABIE41_RS02795 0.43 -1.4
574,077 - ABIE41_RS02795 0.43 +0.4
574,077 - ABIE41_RS02795 0.43 +0.7
574,220 + ABIE41_RS02795 0.59 -0.8
574,221 - ABIE41_RS02795 0.59 +0.8
574,307 + ABIE41_RS02795 0.69 +0.1
574,307 + ABIE41_RS02795 0.69 -0.7
574,308 - ABIE41_RS02795 0.69 +0.2
574,308 - ABIE41_RS02795 0.69 +1.3
574,308 - ABIE41_RS02795 0.69 +0.4
574,365 - ABIE41_RS02795 0.75 +0.5
574,431 - ABIE41_RS02795 0.83 -0.0
574,431 - ABIE41_RS02795 0.83 +1.0
574,432 - ABIE41_RS02795 0.83 +0.6
574,624 + +0.5
574,625 - +0.9
574,625 - -0.7
574,681 + ABIE41_RS02800 0.10 +0.4
574,681 + ABIE41_RS02800 0.10 -0.3
574,681 + ABIE41_RS02800 0.10 +1.2
575,203 + ABIE41_RS02800 0.64 +0.1
575,203 + ABIE41_RS02800 0.64 -2.2
575,203 + ABIE41_RS02800 0.64 -0.1
575,203 + ABIE41_RS02800 0.64 +0.3
575,203 + ABIE41_RS02800 0.64 +0.2
575,203 + ABIE41_RS02800 0.64 +0.7
575,203 + ABIE41_RS02800 0.64 +3.0
575,204 - ABIE41_RS02800 0.64 -0.8
575,204 - ABIE41_RS02800 0.64 +2.0
575,204 - ABIE41_RS02800 0.64 -0.1
575,365 + ABIE41_RS02800 0.80 +1.2
575,365 + ABIE41_RS02800 0.80 +0.6
575,365 + ABIE41_RS02800 0.80 +0.7
575,365 + ABIE41_RS02800 0.80 +0.4
575,366 - ABIE41_RS02800 0.81 +1.4
575,366 - ABIE41_RS02800 0.81 +0.2
575,374 + ABIE41_RS02800 0.81 +0.6
575,374 + ABIE41_RS02800 0.81 +0.6
575,374 + ABIE41_RS02800 0.81 +0.0
575,396 - ABIE41_RS02800 0.84 +0.3
575,473 + +0.1
575,473 + +1.8
575,544 - +0.1
575,551 - +0.5
575,551 - +0.4
575,551 - +0.2
576,002 + ABIE41_RS02805 0.59 +0.1
576,002 + ABIE41_RS02805 0.59 +0.1
576,002 + ABIE41_RS02805 0.59 +2.0
576,002 + ABIE41_RS02805 0.59 +0.5
576,002 + ABIE41_RS02805 0.59 +0.8
576,003 - ABIE41_RS02805 0.59 +0.1
576,038 + ABIE41_RS02805 0.64 -1.3
576,038 + ABIE41_RS02805 0.64 -1.4
576,038 + ABIE41_RS02805 0.64 +0.2
576,038 + ABIE41_RS02805 0.64 +1.7
576,038 + ABIE41_RS02805 0.64 +0.2
576,038 + ABIE41_RS02805 0.64 +0.9
576,038 + ABIE41_RS02805 0.64 +0.2
576,038 + ABIE41_RS02805 0.64 -0.3
576,038 + ABIE41_RS02805 0.64 +0.4
576,038 + ABIE41_RS02805 0.64 +0.1
576,039 - ABIE41_RS02805 0.64 +0.0
576,039 - ABIE41_RS02805 0.64 +1.5
576,039 - ABIE41_RS02805 0.64 +0.7
576,039 - ABIE41_RS02805 0.64 +0.9
576,039 - ABIE41_RS02805 0.64 +0.8
576,039 - ABIE41_RS02805 0.64 -1.0
576,039 - ABIE41_RS02805 0.64 +0.4
576,039 - ABIE41_RS02805 0.64 -0.3
576,039 - ABIE41_RS02805 0.64 +0.4
576,039 - ABIE41_RS02805 0.64 +1.0
576,039 - ABIE41_RS02805 0.64 +1.4
576,072 - ABIE41_RS02805 0.69 +0.7
576,098 + ABIE41_RS02805 0.73 -1.4
576,098 + ABIE41_RS02805 0.73 +0.5
576,098 + ABIE41_RS02805 0.73 +1.3
576,099 - ABIE41_RS02805 0.73 +1.3
576,191 + ABIE41_RS02805 0.86 +0.6
576,192 - ABIE41_RS02805 0.86 -0.1
576,192 - ABIE41_RS02805 0.86 +0.1
576,192 - ABIE41_RS02805 0.86 +1.8
576,192 - ABIE41_RS02805 0.86 +1.9
576,304 - +0.4
576,311 + +0.6
576,311 + +0.8

Or see this region's nucleotide sequence