Strain Fitness in Serratia liquefaciens MT49 around IAI46_23815

Experiment: copper (II) chloride 15 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 15 uM, aerobic
5,064,920	+		IAI46_23810	0.59	-0.4
5,064,920	+		IAI46_23810	0.59	+0.3
5,064,920	+		IAI46_23810	0.59	+0.3
5,064,920	+		IAI46_23810	0.59	+0.2
5,064,921	-		IAI46_23810	0.59	-0.3
5,064,921	-		IAI46_23810	0.59	+0.9
5,064,921	-		IAI46_23810	0.59	-1.2
5,064,921	-		IAI46_23810	0.59	+0.9
5,064,921	-		IAI46_23810	0.59	-0.4
5,064,921	-		IAI46_23810	0.59	+0.3
5,064,922	+		IAI46_23810	0.60	+0.9
5,064,922	+		IAI46_23810	0.60	+0.9
5,064,922	+		IAI46_23810	0.60	+0.2
5,064,922	+		IAI46_23810	0.60	-0.0
5,064,922	+		IAI46_23810	0.60	+0.6
5,064,922	+		IAI46_23810	0.60	+0.2
5,064,923	-		IAI46_23810	0.60	+1.2
5,064,923	-		IAI46_23810	0.60	-0.1
5,064,923	-		IAI46_23810	0.60	-1.2
5,064,932	-		IAI46_23810	0.60	-0.2
5,064,960	+		IAI46_23810	0.61	-0.8
5,064,968	+		IAI46_23810	0.62	-0.1
5,064,968	+		IAI46_23810	0.62	+0.7
5,064,968	+		IAI46_23810	0.62	-0.2
5,064,968	+		IAI46_23810	0.62	-1.1
5,064,969	-		IAI46_23810	0.62	+0.3
5,064,969	-		IAI46_23810	0.62	-0.1
5,064,969	-		IAI46_23810	0.62	+0.6
5,065,093	+		IAI46_23810	0.67	-0.5
5,065,104	+		IAI46_23810	0.67	+0.1
5,065,104	+		IAI46_23810	0.67	-0.3
5,065,105	-		IAI46_23810	0.67	+0.3
5,065,105	-		IAI46_23810	0.67	-0.0
5,065,121	-		IAI46_23810	0.68	-0.6
5,065,161	+		IAI46_23810	0.70	-0.4
5,065,162	-		IAI46_23810	0.70	+0.3
5,065,165	+		IAI46_23810	0.70	-0.1
5,065,165	+		IAI46_23810	0.70	-0.0
5,065,165	+		IAI46_23810	0.70	+0.7
5,065,165	+		IAI46_23810	0.70	+0.7
5,065,165	+		IAI46_23810	0.70	-0.1
5,065,166	-		IAI46_23810	0.70	+1.0
5,065,166	-		IAI46_23810	0.70	+0.0
5,065,166	-		IAI46_23810	0.70	+1.2
5,065,166	-		IAI46_23810	0.70	+0.0
5,065,171	+		IAI46_23810	0.70	-0.2
5,065,172	-		IAI46_23810	0.70	+0.3
5,065,304	-		IAI46_23810	0.76	+0.3
5,065,304	-		IAI46_23810	0.76	+0.2
5,065,308	+		IAI46_23810	0.76	+2.0
5,065,308	+		IAI46_23810	0.76	+0.7
5,065,308	+		IAI46_23810	0.76	-0.6
5,065,308	+		IAI46_23810	0.76	+0.8
5,065,308	+		IAI46_23810	0.76	+0.7
5,065,309	-		IAI46_23810	0.76	+0.0
5,065,309	-		IAI46_23810	0.76	+0.8
5,065,312	+		IAI46_23810	0.76	-0.7
5,065,312	+		IAI46_23810	0.76	+0.5
5,065,312	+		IAI46_23810	0.76	-0.4
5,065,319	+		IAI46_23810	0.77	+0.7
5,065,319	+		IAI46_23810	0.77	+1.5
5,065,319	+		IAI46_23810	0.77	-0.5
5,065,319	+		IAI46_23810	0.77	+0.2
5,065,320	-		IAI46_23810	0.77	+0.6
5,065,333	+		IAI46_23810	0.77	+0.1
5,065,333	+		IAI46_23810	0.77	-0.5
5,065,333	+		IAI46_23810	0.77	+0.4
5,065,333	+		IAI46_23810	0.77	+0.6
5,065,334	-		IAI46_23810	0.77	-0.4
5,065,334	-		IAI46_23810	0.77	+0.3
5,065,366	+		IAI46_23810	0.79	+0.3
5,065,440	+		IAI46_23810	0.82	-0.1
5,065,441	-		IAI46_23810	0.82	-0.8
5,065,539	-		IAI46_23810	0.86	+0.2
5,065,539	-		IAI46_23810	0.86	-0.3
5,065,539	-		IAI46_23810	0.86	+0.5
5,065,544	+		IAI46_23810	0.86	-0.3
5,065,544	+		IAI46_23810	0.86	-0.7
5,065,545	-		IAI46_23810	0.86	-0.0
5,065,565	+		IAI46_23810	0.87	+0.3
5,065,659	-				+0.4
5,065,679	+				+0.1
5,065,712	+				+0.0
5,065,712	+				-0.5
5,065,713	-				-1.2
5,065,783	+				+0.4
5,065,783	+				+0.5
5,065,783	+				+0.4
5,065,784	-				+0.6
5,065,784	-				-0.5
5,065,798	-				-0.1
5,065,908	-		IAI46_23815	0.21	-0.3
5,066,014	-		IAI46_23815	0.64	+0.6
5,066,081	+				-0.1
5,066,081	+				+0.3
5,066,081	+				+1.1
5,066,081	+				+0.1
5,066,081	+				-0.3
5,066,082	-				+0.9
5,066,083	+				+0.0
5,066,084	-				-0.1
5,066,084	-				-0.1
5,066,098	+				-0.1
5,066,098	+				-0.4
5,066,099	-				-0.7
5,066,139	+				+0.8
5,066,154	+				+0.8
5,066,168	-		IAI46_23820	0.11	-0.0
5,066,208	+		IAI46_23820	0.25	+0.5
5,066,208	+		IAI46_23820	0.25	-0.3
5,066,209	-		IAI46_23820	0.25	+0.2
5,066,209	-		IAI46_23820	0.25	+0.4
5,066,209	-		IAI46_23820	0.25	-0.2
5,066,209	-		IAI46_23820	0.25	-1.1
5,066,211	+		IAI46_23820	0.26	-0.1
5,066,211	+		IAI46_23820	0.26	-0.3
5,066,211	+		IAI46_23820	0.26	-0.4
5,066,212	-		IAI46_23820	0.26	+1.3
5,066,212	-		IAI46_23820	0.26	+0.7
5,066,212	-		IAI46_23820	0.26	+0.6
5,066,212	-		IAI46_23820	0.26	-0.2
5,066,212	-		IAI46_23820	0.26	+1.1
5,066,212	-		IAI46_23820	0.26	+0.2
5,066,287	+		IAI46_23820	0.52	+0.5
5,066,288	-		IAI46_23820	0.53	+0.3
5,066,288	-		IAI46_23820	0.53	+0.4
5,066,288	-		IAI46_23820	0.53	-0.4
5,066,291	+		IAI46_23820	0.54	+0.8
5,066,292	-		IAI46_23820	0.54	-0.2
5,066,292	-		IAI46_23820	0.54	+0.3
5,066,292	-		IAI46_23820	0.54	-0.1
5,066,296	+		IAI46_23820	0.55	+0.2
5,066,310	+		IAI46_23820	0.60	-1.7
5,066,311	-		IAI46_23820	0.61	+0.2
5,066,327	-		IAI46_23820	0.66	+0.3
5,066,391	-		IAI46_23820	0.89	-0.5
5,066,391	-		IAI46_23820	0.89	+1.0
5,066,424	-				-0.3
5,066,428	+				-0.1
5,066,428	+				+0.3
5,066,428	+				+0.2
5,066,429	-				+0.2
5,066,429	-				+0.4
5,066,429	-				+1.0
5,066,443	-				+0.1
5,066,454	+				+0.3
5,066,455	-				-0.5
5,066,472	+				+0.0
5,066,473	-				-0.7
5,066,484	-				+0.4
5,066,604	-				+0.3
5,066,604	-				+0.7
5,066,611	+				-0.0
5,066,611	+				-0.3
5,066,611	+				-0.6
5,066,611	+				+0.2
5,066,612	-				+1.8
5,066,612	-				+0.4
5,066,612	-				-1.1
5,066,615	+				+1.1
5,066,666	+				-0.2
5,066,666	+				-1.0
5,066,666	+				-0.2
5,066,667	-				+1.0
5,066,716	-				+0.6
5,066,846	+		IAI46_23825	0.21	+0.3
5,066,853	-		IAI46_23825	0.22	+1.5
5,066,933	-		IAI46_23825	0.32	-0.1
5,067,040	+		IAI46_23825	0.46	+0.1
5,067,040	+		IAI46_23825	0.46	+0.5
5,067,040	+		IAI46_23825	0.46	-1.0
5,067,045	+		IAI46_23825	0.47	+0.7