Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23525 and IAI46_23530 are separated by 31 nucleotides IAI46_23530 and IAI46_23535 overlap by 4 nucleotides IAI46_23535 and IAI46_23540 overlap by 4 nucleotides IAI46_23540 and IAI46_23545 are separated by 9 nucleotides
IAI46_23525: IAI46_23525 - ABC transporter ATP-binding protein, at 5,004,271 to 5,006,184
_23525
IAI46_23530: IAI46_23530 - taurine dioxygenase, at 5,006,216 to 5,007,064
_23530
IAI46_23535: IAI46_23535 - taurine ABC transporter permease TauC, at 5,007,061 to 5,007,897
_23535
IAI46_23540: IAI46_23540 - taurine ABC transporter ATP-binding subunit, at 5,007,894 to 5,008,661
_23540
IAI46_23545: IAI46_23545 - taurine ABC transporter substrate-binding protein, at 5,008,671 to 5,009,666
_23545
Position (kb) 5007
5008 Strain fitness (log2 ratio) -2
-1
0
1 at 5006.081 kb on + strand at 5006.082 kb on - strand at 5006.082 kb on - strand at 5006.082 kb on - strand at 5006.164 kb on - strand at 5006.226 kb on + strand at 5006.227 kb on - strand at 5006.237 kb on - strand at 5006.283 kb on + strand at 5006.284 kb on - strand at 5006.298 kb on + strand at 5006.298 kb on + strand at 5006.494 kb on + strand, within IAI46_23530 at 5006.494 kb on + strand, within IAI46_23530 at 5006.495 kb on - strand, within IAI46_23530 at 5006.495 kb on - strand, within IAI46_23530 at 5006.495 kb on - strand, within IAI46_23530 at 5006.498 kb on + strand, within IAI46_23530 at 5006.499 kb on - strand, within IAI46_23530 at 5006.499 kb on - strand, within IAI46_23530 at 5006.499 kb on - strand, within IAI46_23530 at 5006.499 kb on - strand, within IAI46_23530 at 5006.638 kb on + strand, within IAI46_23530 at 5006.661 kb on + strand, within IAI46_23530 at 5006.661 kb on + strand, within IAI46_23530 at 5006.662 kb on - strand, within IAI46_23530 at 5006.662 kb on - strand, within IAI46_23530 at 5006.689 kb on + strand, within IAI46_23530 at 5006.704 kb on + strand, within IAI46_23530 at 5006.704 kb on + strand, within IAI46_23530 at 5006.704 kb on + strand, within IAI46_23530 at 5006.704 kb on + strand, within IAI46_23530 at 5006.705 kb on - strand, within IAI46_23530 at 5006.705 kb on - strand, within IAI46_23530 at 5006.708 kb on + strand, within IAI46_23530 at 5006.768 kb on - strand, within IAI46_23530 at 5006.776 kb on + strand, within IAI46_23530 at 5006.777 kb on - strand, within IAI46_23530 at 5006.777 kb on - strand, within IAI46_23530 at 5006.777 kb on - strand, within IAI46_23530 at 5006.794 kb on + strand, within IAI46_23530 at 5006.794 kb on + strand, within IAI46_23530 at 5006.794 kb on + strand, within IAI46_23530 at 5006.794 kb on + strand, within IAI46_23530 at 5006.795 kb on - strand, within IAI46_23530 at 5006.795 kb on - strand, within IAI46_23530 at 5006.818 kb on + strand, within IAI46_23530 at 5006.819 kb on - strand, within IAI46_23530 at 5006.847 kb on + strand, within IAI46_23530 at 5006.848 kb on - strand, within IAI46_23530 at 5006.890 kb on + strand, within IAI46_23530 at 5006.890 kb on + strand, within IAI46_23530 at 5006.890 kb on + strand, within IAI46_23530 at 5006.958 kb on + strand, within IAI46_23530 at 5006.959 kb on - strand, within IAI46_23530 at 5006.959 kb on - strand, within IAI46_23530 at 5006.959 kb on - strand, within IAI46_23530 at 5007.025 kb on + strand at 5007.025 kb on + strand at 5007.026 kb on - strand at 5007.026 kb on - strand at 5007.027 kb on + strand at 5007.027 kb on + strand at 5007.028 kb on - strand at 5007.028 kb on - strand at 5007.028 kb on - strand at 5007.028 kb on - strand at 5007.028 kb on - strand at 5007.028 kb on - strand at 5007.028 kb on - strand at 5007.028 kb on - strand at 5007.028 kb on - strand at 5007.047 kb on - strand at 5007.070 kb on + strand at 5007.071 kb on - strand at 5007.071 kb on - strand at 5007.204 kb on + strand, within IAI46_23535 at 5007.204 kb on + strand, within IAI46_23535 at 5007.204 kb on + strand, within IAI46_23535 at 5007.205 kb on - strand, within IAI46_23535 at 5007.205 kb on - strand, within IAI46_23535 at 5007.205 kb on - strand, within IAI46_23535 at 5007.205 kb on - strand, within IAI46_23535 at 5007.500 kb on + strand, within IAI46_23535 at 5007.562 kb on - strand, within IAI46_23535 at 5007.562 kb on - strand, within IAI46_23535 at 5007.601 kb on - strand, within IAI46_23535 at 5007.676 kb on - strand, within IAI46_23535 at 5007.695 kb on - strand, within IAI46_23535 at 5007.695 kb on - strand, within IAI46_23535 at 5007.695 kb on - strand, within IAI46_23535 at 5007.780 kb on + strand, within IAI46_23535 at 5007.835 kb on - strand at 5007.835 kb on - strand at 5007.877 kb on - strand at 5007.877 kb on - strand at 5007.897 kb on + strand at 5007.897 kb on + strand at 5007.897 kb on + strand at 5007.897 kb on + strand at 5007.898 kb on - strand at 5007.898 kb on - strand at 5007.926 kb on + strand at 5007.938 kb on - strand at 5007.938 kb on - strand at 5007.954 kb on - strand at 5007.970 kb on + strand at 5008.175 kb on + strand, within IAI46_23540 at 5008.176 kb on - strand, within IAI46_23540 at 5008.245 kb on + strand, within IAI46_23540 at 5008.245 kb on + strand, within IAI46_23540 at 5008.245 kb on + strand, within IAI46_23540 at 5008.245 kb on + strand, within IAI46_23540 at 5008.246 kb on - strand, within IAI46_23540 at 5008.246 kb on - strand, within IAI46_23540 at 5008.407 kb on - strand, within IAI46_23540 at 5008.467 kb on + strand, within IAI46_23540 at 5008.630 kb on + strand at 5008.631 kb on - strand at 5008.631 kb on - strand at 5008.720 kb on + strand at 5008.720 kb on + strand at 5008.720 kb on + strand at 5008.721 kb on - strand at 5008.721 kb on - strand at 5008.721 kb on - strand at 5008.721 kb on - strand at 5008.721 kb on - strand at 5008.721 kb on - strand at 5008.729 kb on + strand at 5008.729 kb on + strand at 5008.730 kb on - strand at 5008.843 kb on + strand, within IAI46_23545 at 5008.843 kb on + strand, within IAI46_23545 at 5008.843 kb on + strand, within IAI46_23545 at 5008.843 kb on + strand, within IAI46_23545 at 5008.843 kb on + strand, within IAI46_23545 at 5008.843 kb on + strand, within IAI46_23545 at 5008.844 kb on - strand, within IAI46_23545 at 5008.844 kb on - strand, within IAI46_23545 at 5008.844 kb on - strand, within IAI46_23545 at 5008.847 kb on + strand, within IAI46_23545 at 5008.847 kb on + strand, within IAI46_23545 at 5008.847 kb on + strand, within IAI46_23545 at 5008.847 kb on + strand, within IAI46_23545 at 5008.848 kb on - strand, within IAI46_23545 at 5008.848 kb on - strand, within IAI46_23545
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 5,006,081 + -0.5 5,006,082 - +0.1 5,006,082 - -0.1 5,006,082 - -0.1 5,006,164 - -0.2 5,006,226 + +0.4 5,006,227 - -0.0 5,006,237 - +0.4 5,006,283 + +1.0 5,006,284 - -0.3 5,006,298 + +0.7 5,006,298 + +0.7 5,006,494 + IAI46_23530 0.33 +1.2 5,006,494 + IAI46_23530 0.33 -0.4 5,006,495 - IAI46_23530 0.33 +0.6 5,006,495 - IAI46_23530 0.33 +0.4 5,006,495 - IAI46_23530 0.33 -0.2 5,006,498 + IAI46_23530 0.33 -0.5 5,006,499 - IAI46_23530 0.33 +1.4 5,006,499 - IAI46_23530 0.33 +0.6 5,006,499 - IAI46_23530 0.33 +0.6 5,006,499 - IAI46_23530 0.33 +0.4 5,006,638 + IAI46_23530 0.50 +0.4 5,006,661 + IAI46_23530 0.52 -0.6 5,006,661 + IAI46_23530 0.52 -0.5 5,006,662 - IAI46_23530 0.53 +0.4 5,006,662 - IAI46_23530 0.53 +0.0 5,006,689 + IAI46_23530 0.56 +0.6 5,006,704 + IAI46_23530 0.57 -0.0 5,006,704 + IAI46_23530 0.57 +0.5 5,006,704 + IAI46_23530 0.57 +0.0 5,006,704 + IAI46_23530 0.57 -0.1 5,006,705 - IAI46_23530 0.58 -0.0 5,006,705 - IAI46_23530 0.58 -0.3 5,006,708 + IAI46_23530 0.58 -0.5 5,006,768 - IAI46_23530 0.65 +0.5 5,006,776 + IAI46_23530 0.66 +0.1 5,006,777 - IAI46_23530 0.66 -0.4 5,006,777 - IAI46_23530 0.66 -0.0 5,006,777 - IAI46_23530 0.66 -0.3 5,006,794 + IAI46_23530 0.68 +0.9 5,006,794 + IAI46_23530 0.68 +0.7 5,006,794 + IAI46_23530 0.68 +0.4 5,006,794 + IAI46_23530 0.68 -0.8 5,006,795 - IAI46_23530 0.68 +0.6 5,006,795 - IAI46_23530 0.68 -0.1 5,006,818 + IAI46_23530 0.71 +0.9 5,006,819 - IAI46_23530 0.71 +0.2 5,006,847 + IAI46_23530 0.74 -0.1 5,006,848 - IAI46_23530 0.74 +0.9 5,006,890 + IAI46_23530 0.79 +0.1 5,006,890 + IAI46_23530 0.79 -2.5 5,006,890 + IAI46_23530 0.79 +0.5 5,006,958 + IAI46_23530 0.87 -0.3 5,006,959 - IAI46_23530 0.88 -0.2 5,006,959 - IAI46_23530 0.88 +0.6 5,006,959 - IAI46_23530 0.88 +0.3 5,007,025 + -0.5 5,007,025 + +0.9 5,007,026 - +0.2 5,007,026 - +0.4 5,007,027 + -0.5 5,007,027 + -0.6 5,007,028 - +0.2 5,007,028 - -0.2 5,007,028 - -0.3 5,007,028 - -0.9 5,007,028 - +0.3 5,007,028 - +0.3 5,007,028 - -0.8 5,007,028 - +0.5 5,007,028 - +0.1 5,007,047 - +0.6 5,007,070 + +0.9 5,007,071 - +1.1 5,007,071 - -1.4 5,007,204 + IAI46_23535 0.17 +0.8 5,007,204 + IAI46_23535 0.17 -0.5 5,007,204 + IAI46_23535 0.17 -0.1 5,007,205 - IAI46_23535 0.17 -0.1 5,007,205 - IAI46_23535 0.17 +0.3 5,007,205 - IAI46_23535 0.17 +0.5 5,007,205 - IAI46_23535 0.17 +0.1 5,007,500 + IAI46_23535 0.52 -0.1 5,007,562 - IAI46_23535 0.60 -0.8 5,007,562 - IAI46_23535 0.60 +0.2 5,007,601 - IAI46_23535 0.65 -0.1 5,007,676 - IAI46_23535 0.73 -2.2 5,007,695 - IAI46_23535 0.76 -0.2 5,007,695 - IAI46_23535 0.76 +0.0 5,007,695 - IAI46_23535 0.76 +0.7 5,007,780 + IAI46_23535 0.86 +0.2 5,007,835 - +0.6 5,007,835 - -0.2 5,007,877 - +1.0 5,007,877 - -0.1 5,007,897 + +0.5 5,007,897 + -0.0 5,007,897 + +0.5 5,007,897 + +0.2 5,007,898 - +0.4 5,007,898 - +0.3 5,007,926 + +0.6 5,007,938 - +0.6 5,007,938 - +0.6 5,007,954 - +0.7 5,007,970 + +0.2 5,008,175 + IAI46_23540 0.37 +0.4 5,008,176 - IAI46_23540 0.37 +0.8 5,008,245 + IAI46_23540 0.46 +0.0 5,008,245 + IAI46_23540 0.46 -0.1 5,008,245 + IAI46_23540 0.46 -0.6 5,008,245 + IAI46_23540 0.46 +0.7 5,008,246 - IAI46_23540 0.46 -0.0 5,008,246 - IAI46_23540 0.46 +0.8 5,008,407 - IAI46_23540 0.67 +0.2 5,008,467 + IAI46_23540 0.75 +0.5 5,008,630 + +0.6 5,008,631 - -0.4 5,008,631 - +0.9 5,008,720 + +0.1 5,008,720 + +0.6 5,008,720 + -0.0 5,008,721 - +0.0 5,008,721 - +0.3 5,008,721 - -0.2 5,008,721 - +0.8 5,008,721 - +0.0 5,008,721 - -0.1 5,008,729 + -0.5 5,008,729 + -0.1 5,008,730 - -0.2 5,008,843 + IAI46_23545 0.17 +0.3 5,008,843 + IAI46_23545 0.17 +0.1 5,008,843 + IAI46_23545 0.17 +0.4 5,008,843 + IAI46_23545 0.17 +0.2 5,008,843 + IAI46_23545 0.17 -0.5 5,008,843 + IAI46_23545 0.17 +0.2 5,008,844 - IAI46_23545 0.17 -0.2 5,008,844 - IAI46_23545 0.17 -0.2 5,008,844 - IAI46_23545 0.17 -0.9 5,008,847 + IAI46_23545 0.18 +0.1 5,008,847 + IAI46_23545 0.18 -0.1 5,008,847 + IAI46_23545 0.18 +0.7 5,008,847 + IAI46_23545 0.18 +0.1 5,008,848 - IAI46_23545 0.18 +0.9 5,008,848 - IAI46_23545 0.18 +0.2
Or see this region's nucleotide sequence