Strain Fitness in Serratia liquefaciens MT49 around IAI46_22505

Experiment: copper (II) chloride 15 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 15 uM, aerobic
4,787,170	-				+0.2
4,787,174	-				+0.3
4,787,245	+				-0.0
4,787,248	+				+0.9
4,787,251	+				+0.0
4,787,257	+				+0.5
4,787,257	+				+0.1
4,787,284	+				-0.8
4,787,284	+				-0.5
4,787,291	+				-0.3
4,787,368	-				+0.4
4,787,368	-				-0.3
4,787,404	+				+0.0
4,787,404	+				+1.5
4,787,405	-				+0.1
4,787,405	-				+0.7
4,787,405	-				-0.1
4,787,406	+				+0.1
4,787,406	+				-0.4
4,787,406	+				-0.4
4,787,406	+				-0.4
4,787,406	+				-0.1
4,787,407	-				+0.3
4,787,555	+		IAI46_22495	0.50	+0.7
4,787,555	+		IAI46_22495	0.50	+0.3
4,787,556	-		IAI46_22495	0.50	-0.4
4,787,556	-		IAI46_22495	0.50	-0.4
4,787,607	+		IAI46_22495	0.67	+0.6
4,787,608	-		IAI46_22495	0.67	-0.0
4,787,638	-		IAI46_22495	0.77	+0.6
4,787,652	+		IAI46_22495	0.81	+1.8
4,787,652	+		IAI46_22495	0.81	+0.1
4,787,652	+		IAI46_22495	0.81	-0.5
4,787,669	+		IAI46_22495	0.87	+1.2
4,788,035	+		IAI46_22500	0.78	-0.3
4,788,148	-				+0.8
4,788,187	+				-0.6
4,788,188	-				+0.6
4,788,255	+				+0.3
4,788,255	+				+0.4
4,788,255	+				+0.7
4,788,256	-				-0.5
4,788,256	-				+0.4
4,788,276	+				+0.4
4,788,277	-				-0.3
4,788,453	-		IAI46_22505	0.16	+0.2
4,788,483	+		IAI46_22505	0.18	+0.6
4,788,484	-		IAI46_22505	0.18	+1.0
4,788,556	+		IAI46_22505	0.21	+0.6
4,788,557	-		IAI46_22505	0.21	-1.1
4,788,557	-		IAI46_22505	0.21	+2.0
4,788,557	-		IAI46_22505	0.21	+0.4
4,788,589	+		IAI46_22505	0.23	+0.1
4,788,589	+		IAI46_22505	0.23	+0.3
4,788,589	+		IAI46_22505	0.23	+0.0
4,788,589	+		IAI46_22505	0.23	+0.1
4,788,589	+		IAI46_22505	0.23	-0.3
4,788,590	-		IAI46_22505	0.23	-0.7
4,788,590	-		IAI46_22505	0.23	-0.6
4,788,590	-		IAI46_22505	0.23	+0.6
4,788,590	-		IAI46_22505	0.23	-0.4
4,788,590	-		IAI46_22505	0.23	-1.0
4,788,590	-		IAI46_22505	0.23	+0.7
4,788,590	-		IAI46_22505	0.23	+0.7
4,788,591	+		IAI46_22505	0.23	+0.4
4,788,591	+		IAI46_22505	0.23	+0.2
4,788,591	+		IAI46_22505	0.23	-0.2
4,788,592	-		IAI46_22505	0.23	+0.7
4,788,592	-		IAI46_22505	0.23	+0.5
4,788,623	-		IAI46_22505	0.25	-0.6
4,788,635	+		IAI46_22505	0.26	+0.4
4,788,635	+		IAI46_22505	0.26	-0.1
4,788,642	+		IAI46_22505	0.26	+0.5
4,788,642	+		IAI46_22505	0.26	+0.3
4,788,643	-		IAI46_22505	0.26	+1.6
4,788,643	-		IAI46_22505	0.26	+0.2
4,788,728	-		IAI46_22505	0.30	+1.2
4,788,744	+		IAI46_22505	0.31	+0.3
4,788,871	-		IAI46_22505	0.38	-0.2
4,788,882	+		IAI46_22505	0.38	+0.7
4,788,883	-		IAI46_22505	0.38	+1.3
4,788,883	-		IAI46_22505	0.38	-0.5
4,788,922	-		IAI46_22505	0.40	-1.2
4,788,946	+		IAI46_22505	0.42	+0.2
4,788,947	-		IAI46_22505	0.42	-0.9
4,788,947	-		IAI46_22505	0.42	-0.2
4,788,948	+		IAI46_22505	0.42	+0.2
4,788,948	+		IAI46_22505	0.42	+0.5
4,788,948	+		IAI46_22505	0.42	+1.5
4,788,948	+		IAI46_22505	0.42	-0.4
4,788,948	+		IAI46_22505	0.42	-0.8
4,788,949	-		IAI46_22505	0.42	+0.2
4,788,949	-		IAI46_22505	0.42	+0.3
4,788,949	-		IAI46_22505	0.42	-0.1
4,788,975	-		IAI46_22505	0.43	-0.3
4,788,996	+		IAI46_22505	0.44	+0.2
4,789,048	+		IAI46_22505	0.47	+0.7
4,789,048	+		IAI46_22505	0.47	-0.6
4,789,048	+		IAI46_22505	0.47	+0.2
4,789,049	-		IAI46_22505	0.47	+0.2
4,789,049	-		IAI46_22505	0.47	-0.2
4,789,049	-		IAI46_22505	0.47	+0.6
4,789,057	-		IAI46_22505	0.48	+0.6
4,789,115	-		IAI46_22505	0.51	+0.4
4,789,131	+		IAI46_22505	0.51	+0.7
4,789,131	+		IAI46_22505	0.51	-0.1
4,789,132	-		IAI46_22505	0.51	+0.5
4,789,136	-		IAI46_22505	0.52	+0.9
4,789,136	-		IAI46_22505	0.52	+1.2
4,789,138	-		IAI46_22505	0.52	+0.6
4,789,138	-		IAI46_22505	0.52	+0.4
4,789,150	+		IAI46_22505	0.52	-1.0
4,789,150	+		IAI46_22505	0.52	+0.9
4,789,151	-		IAI46_22505	0.52	+0.8
4,789,151	-		IAI46_22505	0.52	-0.5
4,789,152	+		IAI46_22505	0.52	+0.7
4,789,152	+		IAI46_22505	0.52	-1.1
4,789,152	+		IAI46_22505	0.52	+0.7
4,789,164	+		IAI46_22505	0.53	-0.2
4,789,164	+		IAI46_22505	0.53	-0.1
4,789,165	-		IAI46_22505	0.53	-0.3
4,789,165	-		IAI46_22505	0.53	+0.1
4,789,165	-		IAI46_22505	0.53	+0.4
4,789,248	-		IAI46_22505	0.57	-1.0
4,789,248	-		IAI46_22505	0.57	-0.1
4,789,251	+		IAI46_22505	0.58	-0.9
4,789,251	+		IAI46_22505	0.58	+0.6
4,789,251	+		IAI46_22505	0.58	-1.1
4,789,251	+		IAI46_22505	0.58	-1.8
4,789,252	-		IAI46_22505	0.58	+0.0
4,789,295	+		IAI46_22505	0.60	+0.2
4,789,295	+		IAI46_22505	0.60	+0.4
4,789,316	-		IAI46_22505	0.61	-0.3
4,789,316	-		IAI46_22505	0.61	-0.3
4,789,325	-		IAI46_22505	0.62	-1.2
4,789,325	-		IAI46_22505	0.62	+0.3
4,789,325	-		IAI46_22505	0.62	+0.2
4,789,407	+		IAI46_22505	0.66	+0.3
4,789,419	+		IAI46_22505	0.66	-1.0
4,789,420	-		IAI46_22505	0.66	+0.2
4,789,447	+		IAI46_22505	0.68	-0.0
4,789,447	+		IAI46_22505	0.68	+0.4
4,789,448	-		IAI46_22505	0.68	+0.9
4,789,448	-		IAI46_22505	0.68	+0.2
4,789,522	+		IAI46_22505	0.72	-0.1
4,789,562	+		IAI46_22505	0.74	+0.6
4,789,620	+		IAI46_22505	0.77	-0.1
4,789,776	+		IAI46_22505	0.85	+1.4
4,789,776	+		IAI46_22505	0.85	+0.1
4,789,777	-		IAI46_22505	0.85	-0.2
4,789,777	-		IAI46_22505	0.85	+0.2
4,789,782	-		IAI46_22505	0.85	-1.0
4,789,912	-				-0.2
4,790,031	+				+0.1
4,790,078	+				-0.0
4,790,079	-				+0.2
4,790,079	-				-0.2
4,790,115	+				+0.2
4,790,116	-				-0.7
4,790,116	-				+0.4
4,790,116	-				+0.6
4,790,164	+				+0.6
4,790,164	+				-0.4
4,790,165	-				+1.1
4,790,165	-				+0.1
4,790,167	-				+0.9
4,790,200	+				-0.3
4,790,247	+		IAI46_22510	0.11	+0.0
4,790,248	-		IAI46_22510	0.11	+0.5
4,790,248	-		IAI46_22510	0.11	+1.0
4,790,253	+		IAI46_22510	0.11	-1.9
4,790,365	+		IAI46_22510	0.21	+0.3
4,790,365	+		IAI46_22510	0.21	+0.6
4,790,365	+		IAI46_22510	0.21	-0.1
4,790,366	-		IAI46_22510	0.21	-0.1
4,790,366	-		IAI46_22510	0.21	-0.3
4,790,366	-		IAI46_22510	0.21	+1.1
4,790,386	-		IAI46_22510	0.22	+0.7
4,790,386	-		IAI46_22510	0.22	+0.2
4,790,440	+		IAI46_22510	0.27	-0.8
4,790,441	-		IAI46_22510	0.27	+0.0
4,790,441	-		IAI46_22510	0.27	-0.0
4,790,441	-		IAI46_22510	0.27	-0.4
4,790,441	-		IAI46_22510	0.27	-0.0
4,790,441	-		IAI46_22510	0.27	+0.8
4,790,443	-		IAI46_22510	0.27	+1.0
4,790,443	-		IAI46_22510	0.27	-0.0
4,790,486	-		IAI46_22510	0.31	-0.5
4,790,509	-		IAI46_22510	0.32	+0.8
4,790,633	+		IAI46_22510	0.43	+1.1
4,790,667	+		IAI46_22510	0.45	-0.2
4,790,668	-		IAI46_22510	0.45	-0.1
4,790,671	+		IAI46_22510	0.46	-1.3
4,790,731	+		IAI46_22510	0.51	+1.0
4,790,731	+		IAI46_22510	0.51	-1.1
4,790,732	-		IAI46_22510	0.51	+0.4
4,790,732	-		IAI46_22510	0.51	+0.5
4,790,732	-		IAI46_22510	0.51	+1.6
4,790,761	+		IAI46_22510	0.53	-0.1
4,790,761	+		IAI46_22510	0.53	+0.0
4,790,762	-		IAI46_22510	0.53	+0.2
4,790,892	+		IAI46_22510	0.64	+0.3
4,790,893	-		IAI46_22510	0.64	-1.5
4,790,893	-		IAI46_22510	0.64	-0.6
4,790,893	-		IAI46_22510	0.64	+0.1
4,790,893	-		IAI46_22510	0.64	-0.5
4,790,938	-		IAI46_22510	0.68	+0.1
4,790,938	-		IAI46_22510	0.68	+0.7
4,791,005	-		IAI46_22510	0.73	+0.4
4,791,009	+		IAI46_22510	0.73	+0.6
4,791,016	+		IAI46_22510	0.74	+0.2
4,791,016	+		IAI46_22510	0.74	+0.4