Strain Fitness in Serratia liquefaciens MT49 around IAI46_21515

Experiment: copper (II) chloride 15 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 15 uM, aerobic
4,558,350	+		IAI46_21510	0.84	+0.4
4,558,350	+		IAI46_21510	0.84	+0.2
4,558,350	+		IAI46_21510	0.84	+1.0
4,558,350	+		IAI46_21510	0.84	+0.0
4,558,353	+		IAI46_21510	0.85	+0.2
4,558,354	-		IAI46_21510	0.85	+0.7
4,558,356	+		IAI46_21510	0.85	-1.0
4,558,457	-				+1.0
4,558,476	+				+0.6
4,558,476	+				+0.8
4,558,477	-				+1.0
4,558,477	-				+0.1
4,558,627	+				+0.6
4,558,632	+				-0.0
4,558,632	+				+0.4
4,558,632	+				+0.5
4,558,633	-				-0.9
4,558,633	-				+1.0
4,558,647	+				+0.2
4,558,648	-				+1.8
4,558,652	+				+0.2
4,558,658	+				-0.7
4,558,673	-				+0.1
4,558,694	-				+1.3
4,558,707	-				-0.4
4,558,707	-				+0.0
4,558,707	-				+1.4
4,558,725	+				-1.0
4,558,759	-				-0.9
4,558,801	-				-0.7
4,558,801	-				-0.5
4,558,822	-				+0.3
4,558,859	+				+0.9
4,558,859	+				-0.7
4,558,860	-				+0.8
4,558,869	-				-0.4
4,558,869	-				-0.5
4,558,877	+				+0.5
4,558,877	+				+0.5
4,558,877	+				+0.1
4,558,878	-				+0.4
4,558,878	-				+0.6
4,558,907	+				-1.1
4,558,908	-				+0.2
4,558,968	+				+1.5
4,558,968	+				+0.5
4,558,968	+				+1.2
4,558,968	+				+0.4
4,558,969	-				-1.2
4,558,969	-				+1.0
4,558,969	-				+0.1
4,558,969	-				-0.0
4,558,969	-				+0.2
4,558,969	-				-0.5
4,558,973	+				+0.1
4,558,974	-				-0.7
4,558,974	-				+0.0
4,559,185	-				-0.7
4,559,219	+				+1.8
4,559,219	+				-0.1
4,559,219	+				+0.9
4,559,219	+				+0.1
4,559,219	+				+2.1
4,559,220	-				-0.3
4,559,220	-				+0.3
4,559,220	-				+0.2
4,559,220	-				-0.1
4,559,220	-				+0.6
4,559,220	-				+0.1
4,559,221	+				+0.6
4,559,221	+				+0.1
4,559,221	+				+0.0
4,559,221	+				+1.1
4,559,222	-				+0.0
4,559,222	-				-0.3
4,559,222	-				+0.4
4,559,222	-				+0.5
4,559,222	-				+0.6
4,559,243	+				+0.8
4,559,243	+				-0.6
4,559,244	-				-0.8
4,559,247	+				-0.3
4,559,248	-				-0.3
4,559,339	-				+0.2
4,559,344	+				-0.2
4,559,344	+				+0.1
4,559,344	+				+0.2
4,559,345	-				+0.4
4,559,345	-				+0.3
4,559,360	-				+0.0
4,559,377	+				-0.3
4,559,377	+				+0.5
4,559,377	+				+1.1
4,559,378	-				+0.3
4,559,412	+		IAI46_21515	0.12	+0.0
4,559,459	+		IAI46_21515	0.15	+0.1
4,559,460	-		IAI46_21515	0.15	+1.1
4,559,460	-		IAI46_21515	0.15	-0.7
4,559,478	+		IAI46_21515	0.16	+0.1
4,559,479	-		IAI46_21515	0.17	-0.1
4,559,486	-		IAI46_21515	0.17	+0.6
4,559,547	+		IAI46_21515	0.21	+0.1
4,559,575	+		IAI46_21515	0.24	+1.1
4,559,639	-		IAI46_21515	0.28	-0.3
4,559,658	+		IAI46_21515	0.30	-0.3
4,559,658	+		IAI46_21515	0.30	-0.5
4,559,680	+		IAI46_21515	0.31	-0.2
4,559,680	+		IAI46_21515	0.31	+0.4
4,559,734	+		IAI46_21515	0.35	+1.3
4,559,735	-		IAI46_21515	0.35	-0.3
4,559,735	-		IAI46_21515	0.35	+0.3
4,559,742	+		IAI46_21515	0.36	+0.3
4,559,743	-		IAI46_21515	0.36	-0.2
4,559,743	-		IAI46_21515	0.36	-0.2
4,559,775	+		IAI46_21515	0.38	+0.4
4,559,775	+		IAI46_21515	0.38	+0.3
4,559,776	-		IAI46_21515	0.38	+0.4
4,559,814	-		IAI46_21515	0.41	-0.5
4,559,814	-		IAI46_21515	0.41	+0.1
4,559,869	+		IAI46_21515	0.45	-1.0
4,559,869	+		IAI46_21515	0.45	-0.3
4,559,948	+		IAI46_21515	0.51	-0.3
4,559,949	-		IAI46_21515	0.51	+0.3
4,560,100	+		IAI46_21515	0.62	+0.4
4,560,105	-		IAI46_21515	0.62	+1.8
4,560,105	-		IAI46_21515	0.62	+0.9
4,560,160	+		IAI46_21515	0.66	+0.1
4,560,161	-		IAI46_21515	0.66	-0.2
4,560,161	-		IAI46_21515	0.66	+0.6
4,560,161	-		IAI46_21515	0.66	+0.2
4,560,161	-		IAI46_21515	0.66	+0.6
4,560,247	+		IAI46_21515	0.73	-0.0
4,560,266	-		IAI46_21515	0.74	+2.1
4,560,314	-		IAI46_21515	0.78	-0.6
4,560,320	+		IAI46_21515	0.78	-0.4
4,560,321	-		IAI46_21515	0.78	-0.2
4,560,321	-		IAI46_21515	0.78	-0.7
4,560,430	-		IAI46_21515	0.86	-0.4
4,560,430	-		IAI46_21515	0.86	-0.0
4,560,430	-		IAI46_21515	0.86	+0.2
4,560,480	+		IAI46_21515	0.90	+0.4
4,560,480	+		IAI46_21515	0.90	+0.4
4,560,481	-		IAI46_21515	0.90	+0.5
4,560,507	-				-0.3
4,560,507	-				+0.5
4,560,510	+				+0.0
4,560,511	-				-0.1
4,560,547	+				-1.0
4,560,582	+				-0.2
4,560,582	+				+1.4
4,560,583	-				+0.2
4,560,586	-				-0.8
4,560,608	+				+0.5
4,560,608	+				+1.2
4,560,608	+				+0.5
4,560,609	-				+0.7
4,560,624	-				+0.5
4,560,624	-				-0.5
4,560,642	+				-0.3
4,560,643	-				+0.5
4,560,674	+				+0.5
4,560,675	-				-0.4
4,560,703	+				-0.0
4,560,792	-		IAI46_21520	0.13	+0.4
4,560,792	-		IAI46_21520	0.13	+0.6
4,560,792	-		IAI46_21520	0.13	-0.0
4,560,792	-		IAI46_21520	0.13	-0.5
4,560,794	+		IAI46_21520	0.13	-0.6
4,560,795	-		IAI46_21520	0.13	-0.8
4,560,795	-		IAI46_21520	0.13	+0.5
4,560,795	-		IAI46_21520	0.13	-2.2
4,560,856	+		IAI46_21520	0.18	-0.5
4,560,856	+		IAI46_21520	0.18	+0.3
4,560,857	-		IAI46_21520	0.18	+0.4
4,561,013	-		IAI46_21520	0.30	+0.7
4,561,013	-		IAI46_21520	0.30	+0.3
4,561,026	+		IAI46_21520	0.31	-0.4
4,561,078	-		IAI46_21520	0.35	+1.3
4,561,079	+		IAI46_21520	0.35	-0.1
4,561,080	-		IAI46_21520	0.35	-1.2
4,561,080	-		IAI46_21520	0.35	-0.5
4,561,080	-		IAI46_21520	0.35	+0.5
4,561,080	-		IAI46_21520	0.35	+0.9
4,561,080	-		IAI46_21520	0.35	+0.5
4,561,080	-		IAI46_21520	0.35	+0.5
4,561,172	+		IAI46_21520	0.42	-0.2
4,561,277	+		IAI46_21520	0.50	+0.9
4,561,277	+		IAI46_21520	0.50	+0.2
4,561,278	-		IAI46_21520	0.50	+0.1
4,561,328	-		IAI46_21520	0.53	+0.8
4,561,341	+		IAI46_21520	0.54	+1.3
4,561,386	+		IAI46_21520	0.58	-1.0
4,561,489	+		IAI46_21520	0.66	-0.1
4,561,490	-		IAI46_21520	0.66	+0.1
4,561,509	+		IAI46_21520	0.67	+1.3
4,561,562	+		IAI46_21520	0.71	+0.4
4,561,562	+		IAI46_21520	0.71	-0.0
4,561,563	-		IAI46_21520	0.71	+0.6
4,561,611	+		IAI46_21520	0.75	+0.5
4,561,611	+		IAI46_21520	0.75	+0.1
4,561,612	-		IAI46_21520	0.75	-0.0
4,561,612	-		IAI46_21520	0.75	+1.1
4,561,616	+		IAI46_21520	0.75	+0.5
4,561,616	+		IAI46_21520	0.75	+0.3
4,561,616	+		IAI46_21520	0.75	-0.4
4,561,616	+		IAI46_21520	0.75	-0.7
4,561,616	+		IAI46_21520	0.75	+0.3
4,561,617	-		IAI46_21520	0.75	+0.1
4,561,617	-		IAI46_21520	0.75	-0.1
4,561,617	-		IAI46_21520	0.75	-0.3
4,561,617	-		IAI46_21520	0.75	+0.2
4,561,618	-		IAI46_21520	0.75	-0.2