Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14385 and IAI46_14390 are separated by 666 nucleotides IAI46_14390 and IAI46_14395 are separated by 96 nucleotides
IAI46_14385: IAI46_14385 - GNAT family N-acetyltransferase, at 3,051,851 to 3,052,291
_14385
IAI46_14390: IAI46_14390 - glutamine amidotransferase, at 3,052,958 to 3,053,530
_14390
IAI46_14395: IAI46_14395 - alpha/beta hydrolase, at 3,053,627 to 3,054,316
_14395
Position (kb)
3052
3053
3054 Strain fitness (log2 ratio)
-1
0
1 at 3052.097 kb on + strand, within IAI46_14385 at 3052.122 kb on + strand, within IAI46_14385 at 3052.238 kb on - strand, within IAI46_14385 at 3052.414 kb on + strand at 3052.477 kb on - strand at 3052.512 kb on + strand at 3052.512 kb on + strand at 3052.516 kb on + strand at 3052.517 kb on - strand at 3052.610 kb on - strand at 3052.669 kb on - strand at 3052.676 kb on + strand at 3052.689 kb on - strand at 3052.699 kb on + strand at 3052.844 kb on + strand at 3053.024 kb on - strand, within IAI46_14390 at 3053.024 kb on - strand, within IAI46_14390 at 3053.039 kb on + strand, within IAI46_14390 at 3053.163 kb on + strand, within IAI46_14390 at 3053.292 kb on + strand, within IAI46_14390 at 3053.293 kb on - strand, within IAI46_14390 at 3053.293 kb on - strand, within IAI46_14390 at 3053.293 kb on - strand, within IAI46_14390 at 3053.345 kb on - strand, within IAI46_14390 at 3053.364 kb on - strand, within IAI46_14390 at 3053.367 kb on - strand, within IAI46_14390 at 3053.455 kb on + strand, within IAI46_14390 at 3053.456 kb on - strand, within IAI46_14390 at 3053.456 kb on - strand, within IAI46_14390 at 3053.456 kb on - strand, within IAI46_14390 at 3053.483 kb on - strand at 3053.939 kb on - strand, within IAI46_14395 at 3053.949 kb on + strand, within IAI46_14395 at 3053.950 kb on - strand, within IAI46_14395 at 3054.051 kb on + strand, within IAI46_14395 at 3054.052 kb on - strand, within IAI46_14395 at 3054.108 kb on + strand, within IAI46_14395 at 3054.108 kb on + strand, within IAI46_14395 at 3054.109 kb on - strand, within IAI46_14395 at 3054.296 kb on + strand at 3054.297 kb on - strand at 3054.412 kb on + strand at 3054.413 kb on - strand at 3054.413 kb on - strand at 3054.413 kb on - strand at 3054.414 kb on + strand at 3054.415 kb on - strand at 3054.426 kb on + strand at 3054.427 kb on - strand at 3054.427 kb on - strand at 3054.457 kb on - strand at 3054.461 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 3,052,097 + IAI46_14385 0.56 +0.1 3,052,122 + IAI46_14385 0.61 +0.7 3,052,238 - IAI46_14385 0.88 +1.5 3,052,414 + -1.4 3,052,477 - -0.2 3,052,512 + -0.1 3,052,512 + -0.0 3,052,516 + +1.3 3,052,517 - +0.7 3,052,610 - +0.3 3,052,669 - -0.5 3,052,676 + +1.0 3,052,689 - +0.5 3,052,699 + -1.0 3,052,844 + +0.3 3,053,024 - IAI46_14390 0.12 +0.2 3,053,024 - IAI46_14390 0.12 +0.1 3,053,039 + IAI46_14390 0.14 -0.4 3,053,163 + IAI46_14390 0.36 +0.3 3,053,292 + IAI46_14390 0.58 +0.6 3,053,293 - IAI46_14390 0.58 -0.4 3,053,293 - IAI46_14390 0.58 +0.1 3,053,293 - IAI46_14390 0.58 -0.8 3,053,345 - IAI46_14390 0.68 +0.8 3,053,364 - IAI46_14390 0.71 +0.7 3,053,367 - IAI46_14390 0.71 +0.5 3,053,455 + IAI46_14390 0.87 +0.7 3,053,456 - IAI46_14390 0.87 +0.2 3,053,456 - IAI46_14390 0.87 +0.5 3,053,456 - IAI46_14390 0.87 +0.1 3,053,483 - -0.9 3,053,939 - IAI46_14395 0.45 +1.3 3,053,949 + IAI46_14395 0.47 +0.5 3,053,950 - IAI46_14395 0.47 -0.7 3,054,051 + IAI46_14395 0.61 -0.1 3,054,052 - IAI46_14395 0.62 +0.8 3,054,108 + IAI46_14395 0.70 -0.2 3,054,108 + IAI46_14395 0.70 +1.2 3,054,109 - IAI46_14395 0.70 +0.7 3,054,296 + +0.1 3,054,297 - +0.0 3,054,412 + -0.3 3,054,413 - -1.3 3,054,413 - +1.0 3,054,413 - -0.1 3,054,414 + -1.1 3,054,415 - +0.5 3,054,426 + +1.6 3,054,427 - +1.2 3,054,427 - +0.2 3,054,457 - -0.0 3,054,461 - -0.9
Or see this region's nucleotide sequence