Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14020 and IAI46_14025 overlap by 1 nucleotides IAI46_14025 and IAI46_14030 are separated by 15 nucleotides IAI46_14030 and IAI46_14035 are separated by 3 nucleotides
IAI46_14020: IAI46_14020 - anthranilate synthase component 1, at 2,977,290 to 2,978,849
_14020
IAI46_14025: IAI46_14025 - glutamine amidotransferase, at 2,978,849 to 2,979,430
_14025
IAI46_14030: IAI46_14030 - anthranilate phosphoribosyltransferase, at 2,979,446 to 2,980,444
_14030
IAI46_14035: IAI46_14035 - bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF, at 2,980,448 to 2,981,809
_14035
Position (kb)
2979
2980
2981 Strain fitness (log2 ratio)
-1
0
1
2 at 2978.536 kb on - strand, within IAI46_14020 at 2978.546 kb on + strand, within IAI46_14020 at 2978.547 kb on - strand, within IAI46_14020 at 2978.576 kb on + strand, within IAI46_14020 at 2978.649 kb on + strand, within IAI46_14020 at 2978.681 kb on + strand, within IAI46_14020 at 2978.682 kb on - strand, within IAI46_14020 at 2978.682 kb on - strand, within IAI46_14020 at 2978.701 kb on - strand at 2978.744 kb on - strand at 2978.940 kb on - strand, within IAI46_14025 at 2979.429 kb on - strand at 2979.470 kb on + strand at 2979.659 kb on + strand, within IAI46_14030 at 2979.709 kb on + strand, within IAI46_14030 at 2979.710 kb on - strand, within IAI46_14030 at 2979.882 kb on + strand, within IAI46_14030 at 2979.937 kb on - strand, within IAI46_14030 at 2979.973 kb on - strand, within IAI46_14030 at 2980.027 kb on + strand, within IAI46_14030 at 2980.283 kb on - strand, within IAI46_14030 at 2980.442 kb on + strand at 2980.801 kb on + strand, within IAI46_14035 at 2980.835 kb on + strand, within IAI46_14035 at 2981.108 kb on + strand, within IAI46_14035 at 2981.166 kb on + strand, within IAI46_14035 at 2981.318 kb on + strand, within IAI46_14035 at 2981.379 kb on + strand, within IAI46_14035
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 2,978,536 - IAI46_14020 0.80 -0.2 2,978,546 + IAI46_14020 0.81 -1.0 2,978,547 - IAI46_14020 0.81 -0.5 2,978,576 + IAI46_14020 0.82 +0.9 2,978,649 + IAI46_14020 0.87 +0.3 2,978,681 + IAI46_14020 0.89 +0.1 2,978,682 - IAI46_14020 0.89 +1.3 2,978,682 - IAI46_14020 0.89 +1.0 2,978,701 - +0.3 2,978,744 - -0.1 2,978,940 - IAI46_14025 0.16 -0.6 2,979,429 - +0.5 2,979,470 + -0.1 2,979,659 + IAI46_14030 0.21 +0.7 2,979,709 + IAI46_14030 0.26 +0.8 2,979,710 - IAI46_14030 0.26 -1.0 2,979,882 + IAI46_14030 0.44 +0.7 2,979,937 - IAI46_14030 0.49 -0.6 2,979,973 - IAI46_14030 0.53 -0.1 2,980,027 + IAI46_14030 0.58 +0.6 2,980,283 - IAI46_14030 0.84 +0.3 2,980,442 + +1.8 2,980,801 + IAI46_14035 0.26 -0.3 2,980,835 + IAI46_14035 0.28 -0.1 2,981,108 + IAI46_14035 0.48 +0.8 2,981,166 + IAI46_14035 0.53 +0.1 2,981,318 + IAI46_14035 0.64 +0.4 2,981,379 + IAI46_14035 0.68 +0.7
Or see this region's nucleotide sequence