Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09495 and IAI46_09500 overlap by 1 nucleotides IAI46_09500 and IAI46_09505 overlap by 8 nucleotides IAI46_09505 and IAI46_09510 are separated by 87 nucleotides
IAI46_09495: IAI46_09495 - hypothetical protein, at 2,013,427 to 2,015,922
_09495
IAI46_09500: IAI46_09500 - hypothetical protein, at 2,015,922 to 2,016,395
_09500
IAI46_09505: IAI46_09505 - hypothetical protein, at 2,016,388 to 2,016,879
_09505
IAI46_09510: IAI46_09510 - hypothetical protein, at 2,016,967 to 2,019,723
_09510
Position (kb)
2015
2016
2017 Strain fitness (log2 ratio)
-2
-1
0
1 at 2014.957 kb on + strand, within IAI46_09495 at 2014.957 kb on + strand, within IAI46_09495 at 2014.957 kb on + strand, within IAI46_09495 at 2014.957 kb on + strand, within IAI46_09495 at 2014.958 kb on - strand, within IAI46_09495 at 2014.958 kb on - strand, within IAI46_09495 at 2014.991 kb on + strand, within IAI46_09495 at 2014.992 kb on - strand, within IAI46_09495 at 2014.992 kb on - strand, within IAI46_09495 at 2014.992 kb on - strand, within IAI46_09495 at 2015.026 kb on - strand, within IAI46_09495 at 2015.056 kb on + strand, within IAI46_09495 at 2015.056 kb on + strand, within IAI46_09495 at 2015.056 kb on + strand, within IAI46_09495 at 2015.099 kb on - strand, within IAI46_09495 at 2015.123 kb on + strand, within IAI46_09495 at 2015.124 kb on - strand, within IAI46_09495 at 2015.125 kb on + strand, within IAI46_09495 at 2015.125 kb on + strand, within IAI46_09495 at 2015.126 kb on - strand, within IAI46_09495 at 2015.126 kb on - strand, within IAI46_09495 at 2015.134 kb on - strand, within IAI46_09495 at 2015.167 kb on - strand, within IAI46_09495 at 2015.167 kb on - strand, within IAI46_09495 at 2015.171 kb on - strand, within IAI46_09495 at 2015.276 kb on - strand, within IAI46_09495 at 2015.311 kb on - strand, within IAI46_09495 at 2015.312 kb on + strand, within IAI46_09495 at 2015.312 kb on + strand, within IAI46_09495 at 2015.313 kb on - strand, within IAI46_09495 at 2015.313 kb on - strand, within IAI46_09495 at 2015.313 kb on - strand, within IAI46_09495 at 2015.313 kb on - strand, within IAI46_09495 at 2015.318 kb on - strand, within IAI46_09495 at 2015.356 kb on - strand, within IAI46_09495 at 2015.460 kb on + strand, within IAI46_09495 at 2015.523 kb on - strand, within IAI46_09495 at 2015.554 kb on - strand, within IAI46_09495 at 2015.711 kb on + strand at 2015.741 kb on - strand at 2015.747 kb on - strand at 2015.806 kb on + strand at 2015.824 kb on - strand at 2015.903 kb on + strand at 2016.135 kb on - strand, within IAI46_09500 at 2016.163 kb on + strand, within IAI46_09500 at 2016.164 kb on - strand, within IAI46_09500 at 2016.187 kb on - strand, within IAI46_09500 at 2016.229 kb on + strand, within IAI46_09500 at 2016.279 kb on - strand, within IAI46_09500 at 2016.287 kb on + strand, within IAI46_09500 at 2016.372 kb on - strand at 2016.429 kb on - strand at 2016.533 kb on + strand, within IAI46_09505 at 2016.534 kb on + strand, within IAI46_09505 at 2016.534 kb on - strand, within IAI46_09505 at 2016.804 kb on + strand, within IAI46_09505 at 2016.832 kb on + strand at 2016.832 kb on + strand at 2016.833 kb on - strand at 2016.833 kb on - strand at 2016.833 kb on - strand at 2016.841 kb on + strand at 2016.842 kb on - strand at 2016.900 kb on + strand at 2017.024 kb on - strand at 2017.099 kb on + strand at 2017.099 kb on + strand at 2017.182 kb on + strand at 2017.182 kb on + strand at 2017.185 kb on + strand at 2017.185 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 2,014,957 + IAI46_09495 0.61 +1.0 2,014,957 + IAI46_09495 0.61 -0.8 2,014,957 + IAI46_09495 0.61 -0.0 2,014,957 + IAI46_09495 0.61 +0.9 2,014,958 - IAI46_09495 0.61 +1.1 2,014,958 - IAI46_09495 0.61 +0.5 2,014,991 + IAI46_09495 0.63 +0.2 2,014,992 - IAI46_09495 0.63 -0.0 2,014,992 - IAI46_09495 0.63 +1.1 2,014,992 - IAI46_09495 0.63 +1.4 2,015,026 - IAI46_09495 0.64 +0.6 2,015,056 + IAI46_09495 0.65 -0.2 2,015,056 + IAI46_09495 0.65 -0.6 2,015,056 + IAI46_09495 0.65 +0.1 2,015,099 - IAI46_09495 0.67 -0.3 2,015,123 + IAI46_09495 0.68 +0.4 2,015,124 - IAI46_09495 0.68 -1.1 2,015,125 + IAI46_09495 0.68 +0.2 2,015,125 + IAI46_09495 0.68 +0.1 2,015,126 - IAI46_09495 0.68 +0.5 2,015,126 - IAI46_09495 0.68 -0.1 2,015,134 - IAI46_09495 0.68 -0.1 2,015,167 - IAI46_09495 0.70 +0.3 2,015,167 - IAI46_09495 0.70 +0.2 2,015,171 - IAI46_09495 0.70 -0.1 2,015,276 - IAI46_09495 0.74 -0.3 2,015,311 - IAI46_09495 0.75 -0.2 2,015,312 + IAI46_09495 0.76 -0.1 2,015,312 + IAI46_09495 0.76 +0.7 2,015,313 - IAI46_09495 0.76 -0.3 2,015,313 - IAI46_09495 0.76 +1.3 2,015,313 - IAI46_09495 0.76 -0.3 2,015,313 - IAI46_09495 0.76 +0.9 2,015,318 - IAI46_09495 0.76 +0.5 2,015,356 - IAI46_09495 0.77 +0.1 2,015,460 + IAI46_09495 0.81 +1.1 2,015,523 - IAI46_09495 0.84 +0.1 2,015,554 - IAI46_09495 0.85 -2.1 2,015,711 + +0.9 2,015,741 - +0.7 2,015,747 - -0.6 2,015,806 + +1.2 2,015,824 - +1.1 2,015,903 + +1.6 2,016,135 - IAI46_09500 0.45 +1.4 2,016,163 + IAI46_09500 0.51 +0.1 2,016,164 - IAI46_09500 0.51 +0.8 2,016,187 - IAI46_09500 0.56 +0.4 2,016,229 + IAI46_09500 0.65 +0.3 2,016,279 - IAI46_09500 0.75 +0.1 2,016,287 + IAI46_09500 0.77 +0.9 2,016,372 - +0.0 2,016,429 - +0.5 2,016,533 + IAI46_09505 0.29 -0.5 2,016,534 + IAI46_09505 0.30 -2.6 2,016,534 - IAI46_09505 0.30 +0.3 2,016,804 + IAI46_09505 0.85 -0.2 2,016,832 + +0.3 2,016,832 + -0.2 2,016,833 - -0.2 2,016,833 - +0.8 2,016,833 - -0.7 2,016,841 + +0.6 2,016,842 - -0.9 2,016,900 + -1.3 2,017,024 - +1.0 2,017,099 + -0.2 2,017,099 + +1.1 2,017,182 + -0.4 2,017,182 + -0.8 2,017,185 + +0.8 2,017,185 + -1.2
Or see this region's nucleotide sequence