Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03675 and IAI46_03680 are separated by 29 nucleotides IAI46_03680 and IAI46_03685 are separated by 437 nucleotides
IAI46_03675: IAI46_03675 - 7-carboxy-7-deazaguanine synthase QueE, at 801,612 to 802,283
_03675
IAI46_03680: IAI46_03680 - 6-carboxytetrahydropterin synthase QueD, at 802,313 to 802,672
_03680
IAI46_03685: IAI46_03685 - NADPH-dependent assimilatory sulfite reductase flavoprotein subunit, at 803,110 to 804,909
_03685
Position (kb) 802
803 Strain fitness (log2 ratio) -2
-1
0
1
2 at 801.323 kb on + strand at 801.365 kb on + strand at 801.365 kb on + strand at 801.365 kb on + strand at 801.366 kb on - strand at 801.366 kb on - strand at 801.366 kb on - strand at 801.386 kb on + strand at 801.386 kb on + strand at 801.387 kb on - strand at 801.442 kb on + strand at 801.443 kb on - strand at 801.443 kb on - strand at 801.449 kb on + strand at 801.450 kb on - strand at 801.450 kb on - strand at 801.479 kb on + strand at 801.505 kb on + strand at 801.737 kb on + strand, within IAI46_03675 at 801.738 kb on - strand, within IAI46_03675 at 801.738 kb on - strand, within IAI46_03675 at 801.861 kb on + strand, within IAI46_03675 at 801.861 kb on + strand, within IAI46_03675 at 801.862 kb on - strand, within IAI46_03675 at 801.862 kb on - strand, within IAI46_03675 at 801.863 kb on + strand, within IAI46_03675 at 801.863 kb on + strand, within IAI46_03675 at 801.863 kb on + strand, within IAI46_03675 at 801.864 kb on - strand, within IAI46_03675 at 801.864 kb on - strand, within IAI46_03675 at 801.880 kb on + strand, within IAI46_03675 at 801.881 kb on - strand, within IAI46_03675 at 801.906 kb on + strand, within IAI46_03675 at 801.906 kb on + strand, within IAI46_03675 at 801.906 kb on + strand, within IAI46_03675 at 801.906 kb on + strand, within IAI46_03675 at 801.906 kb on + strand, within IAI46_03675 at 801.907 kb on - strand, within IAI46_03675 at 801.907 kb on - strand, within IAI46_03675 at 802.263 kb on - strand at 802.267 kb on - strand at 802.321 kb on + strand at 802.322 kb on - strand at 802.323 kb on + strand at 802.324 kb on - strand at 802.324 kb on - strand at 802.324 kb on - strand at 802.324 kb on - strand at 802.324 kb on - strand at 802.324 kb on - strand at 802.447 kb on + strand, within IAI46_03680 at 802.458 kb on + strand, within IAI46_03680 at 802.458 kb on + strand, within IAI46_03680 at 802.459 kb on - strand, within IAI46_03680 at 802.459 kb on - strand, within IAI46_03680 at 802.501 kb on + strand, within IAI46_03680 at 802.501 kb on + strand, within IAI46_03680 at 802.531 kb on + strand, within IAI46_03680 at 802.553 kb on + strand, within IAI46_03680 at 802.570 kb on + strand, within IAI46_03680 at 802.600 kb on + strand, within IAI46_03680 at 802.601 kb on - strand, within IAI46_03680 at 802.613 kb on + strand, within IAI46_03680 at 802.613 kb on + strand, within IAI46_03680 at 802.673 kb on + strand at 802.674 kb on - strand at 802.736 kb on + strand at 802.736 kb on + strand at 802.737 kb on - strand at 802.737 kb on - strand at 802.738 kb on + strand at 802.739 kb on - strand at 802.739 kb on - strand at 802.739 kb on - strand at 802.745 kb on - strand at 802.777 kb on + strand at 802.914 kb on - strand at 802.937 kb on - strand at 802.937 kb on - strand at 802.953 kb on - strand at 802.953 kb on - strand at 802.956 kb on + strand at 802.956 kb on + strand at 802.956 kb on + strand at 802.956 kb on + strand at 802.957 kb on - strand at 802.957 kb on - strand at 802.957 kb on - strand at 802.957 kb on - strand at 802.962 kb on + strand at 802.963 kb on - strand at 802.969 kb on + strand at 802.969 kb on + strand at 802.970 kb on - strand at 802.974 kb on - strand at 802.983 kb on + strand at 802.983 kb on + strand at 802.984 kb on - strand at 802.984 kb on - strand at 802.984 kb on - strand at 802.984 kb on - strand at 802.984 kb on - strand at 803.001 kb on + strand at 803.079 kb on + strand at 803.079 kb on + strand at 803.080 kb on - strand at 803.080 kb on - strand at 803.090 kb on + strand at 803.093 kb on - strand at 803.099 kb on + strand at 803.099 kb on + strand at 803.099 kb on + strand at 803.103 kb on + strand at 803.104 kb on - strand at 803.104 kb on - strand at 803.224 kb on + strand at 803.407 kb on + strand, within IAI46_03685 at 803.502 kb on + strand, within IAI46_03685 at 803.536 kb on - strand, within IAI46_03685 at 803.658 kb on - strand, within IAI46_03685
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 801,323 + -0.9 801,365 + -0.4 801,365 + +1.3 801,365 + +0.4 801,366 - -0.1 801,366 - -0.7 801,366 - +0.4 801,386 + +0.3 801,386 + -0.8 801,387 - +0.1 801,442 + -0.4 801,443 - -0.2 801,443 - +1.1 801,449 + +1.3 801,450 - -0.3 801,450 - -0.4 801,479 + +0.3 801,505 + +0.4 801,737 + IAI46_03675 0.19 -2.0 801,738 - IAI46_03675 0.19 -0.5 801,738 - IAI46_03675 0.19 +0.8 801,861 + IAI46_03675 0.37 -0.9 801,861 + IAI46_03675 0.37 +0.5 801,862 - IAI46_03675 0.37 -1.8 801,862 - IAI46_03675 0.37 -0.1 801,863 + IAI46_03675 0.37 -0.2 801,863 + IAI46_03675 0.37 +0.2 801,863 + IAI46_03675 0.37 +0.4 801,864 - IAI46_03675 0.38 +0.3 801,864 - IAI46_03675 0.38 +0.8 801,880 + IAI46_03675 0.40 +0.1 801,881 - IAI46_03675 0.40 +0.4 801,906 + IAI46_03675 0.44 +2.0 801,906 + IAI46_03675 0.44 +0.8 801,906 + IAI46_03675 0.44 +0.1 801,906 + IAI46_03675 0.44 -0.1 801,906 + IAI46_03675 0.44 +0.1 801,907 - IAI46_03675 0.44 -0.3 801,907 - IAI46_03675 0.44 -0.9 802,263 - -0.3 802,267 - +0.5 802,321 + -1.0 802,322 - +0.2 802,323 + +1.1 802,324 - -0.9 802,324 - -1.6 802,324 - -0.3 802,324 - -0.2 802,324 - +1.1 802,324 - -0.2 802,447 + IAI46_03680 0.37 +1.4 802,458 + IAI46_03680 0.40 +0.1 802,458 + IAI46_03680 0.40 -0.2 802,459 - IAI46_03680 0.41 +0.6 802,459 - IAI46_03680 0.41 +0.5 802,501 + IAI46_03680 0.52 +0.2 802,501 + IAI46_03680 0.52 +0.5 802,531 + IAI46_03680 0.61 -0.4 802,553 + IAI46_03680 0.67 +0.4 802,570 + IAI46_03680 0.71 -0.2 802,600 + IAI46_03680 0.80 +0.1 802,601 - IAI46_03680 0.80 -0.7 802,613 + IAI46_03680 0.83 -0.7 802,613 + IAI46_03680 0.83 +0.2 802,673 + -0.6 802,674 - +0.2 802,736 + +0.6 802,736 + +0.3 802,737 - +0.8 802,737 - +0.9 802,738 + +0.7 802,739 - +0.7 802,739 - -0.4 802,739 - +0.9 802,745 - +1.0 802,777 + +0.2 802,914 - +0.5 802,937 - +2.1 802,937 - -0.6 802,953 - +0.2 802,953 - +0.1 802,956 + +0.5 802,956 + -0.7 802,956 + +0.7 802,956 + -0.2 802,957 - -0.1 802,957 - +0.0 802,957 - +0.3 802,957 - +0.3 802,962 + -0.0 802,963 - -0.2 802,969 + -0.5 802,969 + -0.3 802,970 - -0.6 802,974 - -0.9 802,983 + -0.7 802,983 + -0.6 802,984 - +0.1 802,984 - +0.3 802,984 - -0.1 802,984 - -0.1 802,984 - -0.1 803,001 + -0.1 803,079 + +0.1 803,079 + +1.1 803,080 - +0.1 803,080 - +1.4 803,090 + -0.5 803,093 - -0.2 803,099 + +1.5 803,099 + -0.8 803,099 + +0.4 803,103 + +1.0 803,104 - -0.2 803,104 - +0.5 803,224 + -1.0 803,407 + IAI46_03685 0.17 -1.5 803,502 + IAI46_03685 0.22 +0.0 803,536 - IAI46_03685 0.24 +0.3 803,658 - IAI46_03685 0.30 +0.5
Or see this region's nucleotide sequence