Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03365 and IAI46_03370 are separated by 464 nucleotides IAI46_03370 and IAI46_03375 are separated by 322 nucleotides
IAI46_03365: IAI46_03365 - transcriptional regulator LeuO, at 727,479 to 728,426
_03365
IAI46_03370: IAI46_03370 - long-chain fatty acid--CoA ligase, at 728,891 to 730,693
_03370
IAI46_03375: IAI46_03375 - acetolactate synthase 3 large subunit, at 731,016 to 732,734
_03375
Position (kb) 728
729
730
731 Strain fitness (log2 ratio) -2
-1
0
1
2 at 727.921 kb on - strand, within IAI46_03365 at 727.922 kb on + strand, within IAI46_03365 at 727.924 kb on + strand, within IAI46_03365 at 727.925 kb on - strand, within IAI46_03365 at 727.931 kb on + strand, within IAI46_03365 at 727.931 kb on + strand, within IAI46_03365 at 727.931 kb on + strand, within IAI46_03365 at 727.948 kb on + strand, within IAI46_03365 at 727.976 kb on + strand, within IAI46_03365 at 727.976 kb on + strand, within IAI46_03365 at 727.976 kb on + strand, within IAI46_03365 at 727.977 kb on - strand, within IAI46_03365 at 727.980 kb on + strand, within IAI46_03365 at 727.981 kb on - strand, within IAI46_03365 at 728.007 kb on - strand, within IAI46_03365 at 728.035 kb on + strand, within IAI46_03365 at 728.036 kb on - strand, within IAI46_03365 at 728.117 kb on - strand, within IAI46_03365 at 728.144 kb on + strand, within IAI46_03365 at 728.154 kb on + strand, within IAI46_03365 at 728.154 kb on + strand, within IAI46_03365 at 728.155 kb on - strand, within IAI46_03365 at 728.155 kb on - strand, within IAI46_03365 at 728.157 kb on + strand, within IAI46_03365 at 728.158 kb on - strand, within IAI46_03365 at 728.158 kb on - strand, within IAI46_03365 at 728.159 kb on + strand, within IAI46_03365 at 728.206 kb on + strand, within IAI46_03365 at 728.206 kb on + strand, within IAI46_03365 at 728.215 kb on + strand, within IAI46_03365 at 728.250 kb on - strand, within IAI46_03365 at 728.341 kb on - strand at 728.414 kb on + strand at 728.415 kb on - strand at 728.434 kb on + strand at 728.475 kb on + strand at 728.475 kb on + strand at 728.475 kb on + strand at 728.476 kb on - strand at 728.476 kb on - strand at 728.476 kb on - strand at 728.480 kb on - strand at 728.501 kb on - strand at 728.599 kb on + strand at 728.663 kb on - strand at 728.782 kb on + strand at 728.782 kb on + strand at 728.782 kb on + strand at 728.782 kb on + strand at 728.782 kb on + strand at 728.782 kb on + strand at 728.783 kb on - strand at 728.783 kb on - strand at 728.783 kb on - strand at 728.787 kb on + strand at 728.787 kb on + strand at 728.787 kb on + strand at 728.787 kb on + strand at 728.788 kb on - strand at 728.788 kb on - strand at 728.788 kb on - strand at 728.788 kb on - strand at 728.791 kb on + strand at 728.791 kb on + strand at 728.792 kb on - strand at 728.792 kb on - strand at 728.792 kb on - strand at 728.792 kb on - strand at 728.792 kb on - strand at 728.820 kb on + strand at 728.858 kb on + strand at 728.882 kb on + strand at 728.912 kb on + strand at 728.929 kb on + strand at 728.929 kb on + strand at 728.930 kb on - strand at 728.930 kb on - strand at 728.932 kb on - strand at 728.945 kb on - strand at 729.022 kb on + strand at 729.029 kb on - strand at 729.082 kb on + strand, within IAI46_03370 at 729.083 kb on - strand, within IAI46_03370 at 729.083 kb on - strand, within IAI46_03370 at 729.100 kb on + strand, within IAI46_03370 at 729.101 kb on - strand, within IAI46_03370 at 729.167 kb on + strand, within IAI46_03370 at 729.200 kb on - strand, within IAI46_03370 at 729.223 kb on + strand, within IAI46_03370 at 729.301 kb on + strand, within IAI46_03370 at 729.302 kb on - strand, within IAI46_03370 at 729.302 kb on - strand, within IAI46_03370 at 729.306 kb on + strand, within IAI46_03370 at 729.307 kb on - strand, within IAI46_03370 at 729.307 kb on - strand, within IAI46_03370 at 729.307 kb on - strand, within IAI46_03370 at 729.452 kb on + strand, within IAI46_03370 at 729.452 kb on + strand, within IAI46_03370 at 729.452 kb on + strand, within IAI46_03370 at 729.453 kb on - strand, within IAI46_03370 at 729.455 kb on - strand, within IAI46_03370 at 729.497 kb on + strand, within IAI46_03370 at 729.521 kb on + strand, within IAI46_03370 at 729.723 kb on - strand, within IAI46_03370 at 729.930 kb on + strand, within IAI46_03370 at 729.930 kb on + strand, within IAI46_03370 at 729.931 kb on - strand, within IAI46_03370 at 729.931 kb on - strand, within IAI46_03370 at 729.931 kb on - strand, within IAI46_03370 at 729.931 kb on - strand, within IAI46_03370 at 730.001 kb on - strand, within IAI46_03370 at 730.010 kb on + strand, within IAI46_03370 at 730.010 kb on + strand, within IAI46_03370 at 730.010 kb on + strand, within IAI46_03370 at 730.010 kb on + strand, within IAI46_03370 at 730.010 kb on + strand, within IAI46_03370 at 730.311 kb on - strand, within IAI46_03370 at 730.311 kb on - strand, within IAI46_03370 at 730.314 kb on + strand, within IAI46_03370 at 730.314 kb on + strand, within IAI46_03370 at 730.315 kb on - strand, within IAI46_03370 at 730.315 kb on - strand, within IAI46_03370 at 730.315 kb on - strand, within IAI46_03370 at 730.315 kb on - strand, within IAI46_03370 at 730.315 kb on - strand, within IAI46_03370 at 730.315 kb on - strand, within IAI46_03370 at 730.440 kb on - strand, within IAI46_03370 at 730.440 kb on - strand, within IAI46_03370 at 730.440 kb on - strand, within IAI46_03370 at 730.498 kb on + strand, within IAI46_03370 at 730.498 kb on + strand, within IAI46_03370 at 730.498 kb on + strand, within IAI46_03370 at 730.499 kb on - strand, within IAI46_03370 at 730.573 kb on + strand at 730.639 kb on + strand at 730.659 kb on - strand at 730.683 kb on - strand at 730.683 kb on - strand at 730.683 kb on - strand at 730.691 kb on + strand at 730.692 kb on - strand at 730.692 kb on - strand at 730.692 kb on - strand at 730.753 kb on + strand at 730.755 kb on + strand at 730.755 kb on + strand at 730.755 kb on + strand at 730.755 kb on + strand at 730.756 kb on - strand at 730.756 kb on - strand at 730.792 kb on - strand at 730.900 kb on - strand at 730.911 kb on - strand at 730.911 kb on - strand at 730.923 kb on + strand at 730.993 kb on + strand at 730.993 kb on + strand at 730.993 kb on + strand at 730.993 kb on + strand at 730.993 kb on + strand at 730.993 kb on + strand at 730.993 kb on + strand at 730.993 kb on + strand at 730.993 kb on + strand at 730.994 kb on - strand at 730.994 kb on - strand at 730.994 kb on - strand at 730.994 kb on - strand at 730.997 kb on + strand at 730.997 kb on + strand at 730.997 kb on + strand at 730.998 kb on - strand at 730.998 kb on - strand at 731.080 kb on + strand at 731.081 kb on - strand at 731.112 kb on - strand at 731.115 kb on + strand at 731.116 kb on - strand at 731.116 kb on - strand at 731.116 kb on - strand at 731.116 kb on - strand at 731.129 kb on + strand at 731.130 kb on - strand at 731.152 kb on + strand at 731.153 kb on - strand at 731.183 kb on + strand at 731.184 kb on - strand at 731.184 kb on - strand at 731.196 kb on + strand, within IAI46_03375 at 731.197 kb on - strand, within IAI46_03375 at 731.197 kb on - strand, within IAI46_03375 at 731.283 kb on + strand, within IAI46_03375 at 731.283 kb on + strand, within IAI46_03375 at 731.283 kb on + strand, within IAI46_03375 at 731.283 kb on + strand, within IAI46_03375 at 731.283 kb on + strand, within IAI46_03375 at 731.283 kb on + strand, within IAI46_03375 at 731.283 kb on + strand, within IAI46_03375 at 731.284 kb on - strand, within IAI46_03375 at 731.284 kb on - strand, within IAI46_03375 at 731.284 kb on - strand, within IAI46_03375 at 731.284 kb on - strand, within IAI46_03375 at 731.284 kb on - strand, within IAI46_03375 at 731.284 kb on - strand, within IAI46_03375 at 731.284 kb on - strand, within IAI46_03375 at 731.284 kb on - strand, within IAI46_03375 at 731.284 kb on - strand, within IAI46_03375 at 731.285 kb on + strand, within IAI46_03375 at 731.426 kb on + strand, within IAI46_03375 at 731.427 kb on - strand, within IAI46_03375 at 731.454 kb on + strand, within IAI46_03375 at 731.455 kb on - strand, within IAI46_03375 at 731.525 kb on - strand, within IAI46_03375 at 731.535 kb on + strand, within IAI46_03375 at 731.536 kb on - strand, within IAI46_03375 at 731.568 kb on + strand, within IAI46_03375 at 731.568 kb on + strand, within IAI46_03375 at 731.568 kb on + strand, within IAI46_03375 at 731.568 kb on + strand, within IAI46_03375 at 731.568 kb on + strand, within IAI46_03375 at 731.569 kb on - strand, within IAI46_03375 at 731.569 kb on - strand, within IAI46_03375 at 731.569 kb on - strand, within IAI46_03375 at 731.604 kb on - strand, within IAI46_03375 at 731.645 kb on + strand, within IAI46_03375 at 731.649 kb on + strand, within IAI46_03375 at 731.650 kb on - strand, within IAI46_03375 at 731.650 kb on - strand, within IAI46_03375 at 731.650 kb on - strand, within IAI46_03375
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 727,921 - IAI46_03365 0.47 +0.5 727,922 + IAI46_03365 0.47 +0.4 727,924 + IAI46_03365 0.47 +0.0 727,925 - IAI46_03365 0.47 +0.2 727,931 + IAI46_03365 0.48 -0.3 727,931 + IAI46_03365 0.48 -0.4 727,931 + IAI46_03365 0.48 -0.5 727,948 + IAI46_03365 0.49 -0.2 727,976 + IAI46_03365 0.52 -0.5 727,976 + IAI46_03365 0.52 -0.2 727,976 + IAI46_03365 0.52 +0.7 727,977 - IAI46_03365 0.53 +0.1 727,980 + IAI46_03365 0.53 -1.3 727,981 - IAI46_03365 0.53 +1.0 728,007 - IAI46_03365 0.56 -0.2 728,035 + IAI46_03365 0.59 +0.5 728,036 - IAI46_03365 0.59 +0.4 728,117 - IAI46_03365 0.67 -0.3 728,144 + IAI46_03365 0.70 -0.0 728,154 + IAI46_03365 0.71 +0.7 728,154 + IAI46_03365 0.71 +0.2 728,155 - IAI46_03365 0.71 +0.4 728,155 - IAI46_03365 0.71 +1.3 728,157 + IAI46_03365 0.72 -1.3 728,158 - IAI46_03365 0.72 +0.3 728,158 - IAI46_03365 0.72 +0.2 728,159 + IAI46_03365 0.72 -1.3 728,206 + IAI46_03365 0.77 +0.1 728,206 + IAI46_03365 0.77 +1.2 728,215 + IAI46_03365 0.78 -1.0 728,250 - IAI46_03365 0.81 -0.0 728,341 - +0.8 728,414 + -1.0 728,415 - +0.4 728,434 + +0.8 728,475 + +0.4 728,475 + -0.3 728,475 + -0.8 728,476 - +0.1 728,476 - +0.0 728,476 - -0.4 728,480 - +0.5 728,501 - +0.2 728,599 + -0.1 728,663 - -0.4 728,782 + +0.2 728,782 + +0.1 728,782 + +0.2 728,782 + -0.3 728,782 + -0.3 728,782 + +0.1 728,783 - +0.7 728,783 - +1.0 728,783 - -0.2 728,787 + +0.9 728,787 + -0.9 728,787 + +0.8 728,787 + -0.1 728,788 - +0.7 728,788 - +0.3 728,788 - -0.8 728,788 - -0.3 728,791 + +0.8 728,791 + +1.1 728,792 - +0.4 728,792 - -0.4 728,792 - +1.1 728,792 - +1.4 728,792 - +1.2 728,820 + +0.2 728,858 + -0.2 728,882 + +0.8 728,912 + -0.6 728,929 + -0.3 728,929 + -0.0 728,930 - +0.3 728,930 - -0.2 728,932 - +0.9 728,945 - +0.1 729,022 + +0.3 729,029 - +0.5 729,082 + IAI46_03370 0.11 +0.1 729,083 - IAI46_03370 0.11 +0.3 729,083 - IAI46_03370 0.11 +0.0 729,100 + IAI46_03370 0.12 +0.2 729,101 - IAI46_03370 0.12 +2.5 729,167 + IAI46_03370 0.15 +0.5 729,200 - IAI46_03370 0.17 +1.1 729,223 + IAI46_03370 0.18 +0.3 729,301 + IAI46_03370 0.23 +0.1 729,302 - IAI46_03370 0.23 +0.2 729,302 - IAI46_03370 0.23 -0.2 729,306 + IAI46_03370 0.23 -0.2 729,307 - IAI46_03370 0.23 -0.1 729,307 - IAI46_03370 0.23 -0.1 729,307 - IAI46_03370 0.23 +0.2 729,452 + IAI46_03370 0.31 +0.6 729,452 + IAI46_03370 0.31 -0.2 729,452 + IAI46_03370 0.31 -0.1 729,453 - IAI46_03370 0.31 -0.6 729,455 - IAI46_03370 0.31 +1.5 729,497 + IAI46_03370 0.34 +0.2 729,521 + IAI46_03370 0.35 -0.3 729,723 - IAI46_03370 0.46 +0.3 729,930 + IAI46_03370 0.58 +0.0 729,930 + IAI46_03370 0.58 +0.4 729,931 - IAI46_03370 0.58 -0.1 729,931 - IAI46_03370 0.58 +0.2 729,931 - IAI46_03370 0.58 +1.4 729,931 - IAI46_03370 0.58 +0.2 730,001 - IAI46_03370 0.62 +0.8 730,010 + IAI46_03370 0.62 -0.7 730,010 + IAI46_03370 0.62 +0.5 730,010 + IAI46_03370 0.62 +0.1 730,010 + IAI46_03370 0.62 +0.9 730,010 + IAI46_03370 0.62 +0.6 730,311 - IAI46_03370 0.79 +1.2 730,311 - IAI46_03370 0.79 +0.4 730,314 + IAI46_03370 0.79 +0.4 730,314 + IAI46_03370 0.79 +0.2 730,315 - IAI46_03370 0.79 +0.2 730,315 - IAI46_03370 0.79 +1.5 730,315 - IAI46_03370 0.79 +1.0 730,315 - IAI46_03370 0.79 +0.3 730,315 - IAI46_03370 0.79 -0.1 730,315 - IAI46_03370 0.79 +1.5 730,440 - IAI46_03370 0.86 +0.7 730,440 - IAI46_03370 0.86 +0.7 730,440 - IAI46_03370 0.86 +1.5 730,498 + IAI46_03370 0.89 -0.2 730,498 + IAI46_03370 0.89 -0.6 730,498 + IAI46_03370 0.89 +1.7 730,499 - IAI46_03370 0.89 +0.0 730,573 + +0.5 730,639 + +0.5 730,659 - +0.4 730,683 - -0.4 730,683 - +0.1 730,683 - +0.4 730,691 + +0.4 730,692 - +0.2 730,692 - -0.3 730,692 - +0.4 730,753 + +0.3 730,755 + -0.4 730,755 + +1.0 730,755 + +0.1 730,755 + -0.9 730,756 - -0.3 730,756 - -0.1 730,792 - -0.2 730,900 - +0.0 730,911 - +0.5 730,911 - +0.2 730,923 + -0.1 730,993 + +0.5 730,993 + +0.7 730,993 + +0.1 730,993 + +0.2 730,993 + +0.2 730,993 + +0.5 730,993 + +0.4 730,993 + +0.7 730,993 + -0.0 730,994 - +0.3 730,994 - -0.0 730,994 - -0.5 730,994 - +0.5 730,997 + +0.5 730,997 + +0.1 730,997 + +0.5 730,998 - -0.0 730,998 - +1.0 731,080 + +0.3 731,081 - +1.7 731,112 - -0.3 731,115 + -0.4 731,116 - -0.8 731,116 - +0.3 731,116 - +0.5 731,116 - +0.2 731,129 + +0.8 731,130 - -0.0 731,152 + +0.3 731,153 - +1.4 731,183 + -1.7 731,184 - -0.0 731,184 - +0.2 731,196 + IAI46_03375 0.10 +0.4 731,197 - IAI46_03375 0.11 +1.1 731,197 - IAI46_03375 0.11 +0.3 731,283 + IAI46_03375 0.16 -0.5 731,283 + IAI46_03375 0.16 -2.1 731,283 + IAI46_03375 0.16 -1.4 731,283 + IAI46_03375 0.16 +0.0 731,283 + IAI46_03375 0.16 +0.8 731,283 + IAI46_03375 0.16 +1.5 731,283 + IAI46_03375 0.16 -0.3 731,284 - IAI46_03375 0.16 -0.2 731,284 - IAI46_03375 0.16 +1.8 731,284 - IAI46_03375 0.16 -0.0 731,284 - IAI46_03375 0.16 -0.2 731,284 - IAI46_03375 0.16 +0.8 731,284 - IAI46_03375 0.16 -0.3 731,284 - IAI46_03375 0.16 +0.6 731,284 - IAI46_03375 0.16 +1.1 731,284 - IAI46_03375 0.16 +0.4 731,285 + IAI46_03375 0.16 +0.2 731,426 + IAI46_03375 0.24 +0.8 731,427 - IAI46_03375 0.24 +0.5 731,454 + IAI46_03375 0.25 -0.1 731,455 - IAI46_03375 0.26 +0.5 731,525 - IAI46_03375 0.30 -0.2 731,535 + IAI46_03375 0.30 +0.1 731,536 - IAI46_03375 0.30 -0.3 731,568 + IAI46_03375 0.32 +0.1 731,568 + IAI46_03375 0.32 -0.2 731,568 + IAI46_03375 0.32 +0.1 731,568 + IAI46_03375 0.32 +0.0 731,568 + IAI46_03375 0.32 -0.0 731,569 - IAI46_03375 0.32 +0.9 731,569 - IAI46_03375 0.32 -0.1 731,569 - IAI46_03375 0.32 +0.0 731,604 - IAI46_03375 0.34 +0.2 731,645 + IAI46_03375 0.37 +0.2 731,649 + IAI46_03375 0.37 +0.1 731,650 - IAI46_03375 0.37 +0.7 731,650 - IAI46_03375 0.37 -0.3 731,650 - IAI46_03375 0.37 -0.5
Or see this region's nucleotide sequence