Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_01100 and IAI46_01105 are separated by 45 nucleotides IAI46_01105 and IAI46_01110 are separated by 244 nucleotides IAI46_01110 and IAI46_01115 are separated by 63 nucleotides
IAI46_01100: IAI46_01100 - porphobilinogen synthase, at 243,560 to 244,582
_01100
IAI46_01105: IAI46_01105 - transcription/translation regulatory transformer protein RfaH, at 244,628 to 245,116
_01105
IAI46_01110: IAI46_01110 - dipeptidase PepE, at 245,361 to 246,086
_01110
IAI46_01115: IAI46_01115 - 4-hydroxy-3-polyprenylbenzoate decarboxylase, at 246,150 to 247,670
_01115
Position (kb) 245
246
247 Strain fitness (log2 ratio) -2
-1
0
1 at 244.581 kb on - strand at 244.587 kb on + strand at 244.587 kb on + strand at 244.587 kb on + strand at 244.588 kb on - strand at 244.588 kb on - strand at 244.588 kb on - strand at 244.596 kb on + strand at 244.596 kb on + strand at 244.596 kb on + strand at 244.597 kb on - strand at 244.597 kb on - strand at 244.597 kb on - strand at 244.597 kb on - strand at 244.597 kb on - strand at 244.597 kb on - strand at 244.597 kb on - strand at 244.601 kb on - strand at 244.630 kb on - strand at 244.807 kb on - strand, within IAI46_01105 at 244.819 kb on + strand, within IAI46_01105 at 244.820 kb on - strand, within IAI46_01105 at 244.856 kb on - strand, within IAI46_01105 at 244.880 kb on + strand, within IAI46_01105 at 244.880 kb on + strand, within IAI46_01105 at 244.881 kb on - strand, within IAI46_01105 at 244.956 kb on + strand, within IAI46_01105 at 244.957 kb on - strand, within IAI46_01105 at 245.000 kb on + strand, within IAI46_01105 at 245.018 kb on + strand, within IAI46_01105 at 245.018 kb on + strand, within IAI46_01105 at 245.019 kb on - strand, within IAI46_01105 at 245.019 kb on - strand, within IAI46_01105 at 245.019 kb on - strand, within IAI46_01105 at 245.094 kb on + strand at 245.094 kb on + strand at 245.099 kb on + strand at 245.099 kb on + strand at 245.099 kb on + strand at 245.099 kb on + strand at 245.099 kb on + strand at 245.099 kb on + strand at 245.100 kb on - strand at 245.100 kb on - strand at 245.100 kb on - strand at 245.100 kb on - strand at 245.100 kb on - strand at 245.100 kb on - strand at 245.104 kb on - strand at 245.150 kb on + strand at 245.150 kb on + strand at 245.169 kb on + strand at 245.173 kb on + strand at 245.173 kb on + strand at 245.173 kb on + strand at 245.173 kb on + strand at 245.173 kb on + strand at 245.173 kb on + strand at 245.173 kb on + strand at 245.173 kb on + strand at 245.174 kb on - strand at 245.174 kb on - strand at 245.174 kb on - strand at 245.174 kb on - strand at 245.174 kb on - strand at 245.174 kb on - strand at 245.174 kb on - strand at 245.195 kb on + strand at 245.196 kb on - strand at 245.196 kb on - strand at 245.228 kb on + strand at 245.229 kb on - strand at 245.247 kb on + strand at 245.248 kb on - strand at 245.248 kb on - strand at 245.266 kb on + strand at 245.266 kb on + strand at 245.300 kb on - strand at 245.300 kb on - strand at 245.368 kb on + strand at 245.369 kb on - strand at 245.462 kb on + strand, within IAI46_01110 at 245.462 kb on + strand, within IAI46_01110 at 245.463 kb on - strand, within IAI46_01110 at 245.473 kb on + strand, within IAI46_01110 at 245.473 kb on + strand, within IAI46_01110 at 245.473 kb on + strand, within IAI46_01110 at 245.474 kb on - strand, within IAI46_01110 at 245.477 kb on + strand, within IAI46_01110 at 245.505 kb on + strand, within IAI46_01110 at 245.552 kb on + strand, within IAI46_01110 at 245.553 kb on - strand, within IAI46_01110 at 245.559 kb on - strand, within IAI46_01110 at 245.559 kb on - strand, within IAI46_01110 at 245.665 kb on + strand, within IAI46_01110 at 245.699 kb on + strand, within IAI46_01110 at 245.699 kb on + strand, within IAI46_01110 at 245.699 kb on + strand, within IAI46_01110 at 245.700 kb on - strand, within IAI46_01110 at 245.700 kb on - strand, within IAI46_01110 at 245.700 kb on - strand, within IAI46_01110 at 245.700 kb on - strand, within IAI46_01110 at 245.709 kb on + strand, within IAI46_01110 at 245.710 kb on - strand, within IAI46_01110 at 245.732 kb on + strand, within IAI46_01110 at 245.732 kb on + strand, within IAI46_01110 at 245.768 kb on + strand, within IAI46_01110 at 245.768 kb on + strand, within IAI46_01110 at 245.768 kb on + strand, within IAI46_01110 at 245.769 kb on - strand, within IAI46_01110 at 245.769 kb on - strand, within IAI46_01110 at 245.769 kb on - strand, within IAI46_01110 at 245.780 kb on + strand, within IAI46_01110 at 245.781 kb on - strand, within IAI46_01110 at 245.792 kb on - strand, within IAI46_01110 at 245.792 kb on - strand, within IAI46_01110 at 245.835 kb on + strand, within IAI46_01110 at 245.835 kb on + strand, within IAI46_01110 at 245.835 kb on + strand, within IAI46_01110 at 245.835 kb on + strand, within IAI46_01110 at 245.836 kb on - strand, within IAI46_01110 at 245.849 kb on + strand, within IAI46_01110 at 245.853 kb on - strand, within IAI46_01110 at 245.963 kb on + strand, within IAI46_01110 at 245.964 kb on - strand, within IAI46_01110 at 245.976 kb on + strand, within IAI46_01110 at 245.981 kb on + strand, within IAI46_01110 at 245.981 kb on + strand, within IAI46_01110 at 246.074 kb on + strand at 246.146 kb on + strand at 246.146 kb on + strand at 246.146 kb on + strand at 246.147 kb on - strand at 246.147 kb on - strand at 246.147 kb on - strand at 246.148 kb on + strand at 246.148 kb on + strand at 246.172 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 244,581 - +0.3 244,587 + -0.6 244,587 + -0.2 244,587 + -0.8 244,588 - +1.0 244,588 - +0.2 244,588 - -0.7 244,596 + +0.2 244,596 + -0.3 244,596 + -0.8 244,597 - -0.1 244,597 - +0.7 244,597 - +0.4 244,597 - +0.4 244,597 - +0.0 244,597 - -0.2 244,597 - +0.4 244,601 - -0.5 244,630 - +0.8 244,807 - IAI46_01105 0.37 -0.5 244,819 + IAI46_01105 0.39 -0.4 244,820 - IAI46_01105 0.39 -0.3 244,856 - IAI46_01105 0.47 +0.7 244,880 + IAI46_01105 0.52 +1.7 244,880 + IAI46_01105 0.52 -1.1 244,881 - IAI46_01105 0.52 +0.0 244,956 + IAI46_01105 0.67 -1.1 244,957 - IAI46_01105 0.67 +0.2 245,000 + IAI46_01105 0.76 -0.5 245,018 + IAI46_01105 0.80 +0.0 245,018 + IAI46_01105 0.80 -0.3 245,019 - IAI46_01105 0.80 +0.4 245,019 - IAI46_01105 0.80 -0.8 245,019 - IAI46_01105 0.80 +0.1 245,094 + -0.8 245,094 + -0.0 245,099 + -0.0 245,099 + +0.6 245,099 + -0.3 245,099 + -2.3 245,099 + -0.6 245,099 + +0.1 245,100 - -0.5 245,100 - +0.2 245,100 - +0.0 245,100 - -0.3 245,100 - -0.7 245,100 - +0.3 245,104 - -0.2 245,150 + +0.6 245,150 + +0.4 245,169 + +0.2 245,173 + -0.2 245,173 + -0.2 245,173 + +0.2 245,173 + -0.8 245,173 + -0.2 245,173 + -0.1 245,173 + +0.8 245,173 + +0.2 245,174 - +1.7 245,174 - +0.4 245,174 - +0.3 245,174 - -0.4 245,174 - -0.4 245,174 - +0.5 245,174 - -0.3 245,195 + +0.5 245,196 - +0.4 245,196 - +0.3 245,228 + -0.7 245,229 - +0.3 245,247 + -0.3 245,248 - -0.1 245,248 - +0.2 245,266 + +0.4 245,266 + -0.5 245,300 - -0.4 245,300 - -0.6 245,368 + +0.8 245,369 - +1.5 245,462 + IAI46_01110 0.14 +0.3 245,462 + IAI46_01110 0.14 -0.3 245,463 - IAI46_01110 0.14 +1.1 245,473 + IAI46_01110 0.15 +1.0 245,473 + IAI46_01110 0.15 +0.8 245,473 + IAI46_01110 0.15 -0.3 245,474 - IAI46_01110 0.16 +0.8 245,477 + IAI46_01110 0.16 -0.0 245,505 + IAI46_01110 0.20 +0.6 245,552 + IAI46_01110 0.26 +0.0 245,553 - IAI46_01110 0.26 -0.1 245,559 - IAI46_01110 0.27 +0.6 245,559 - IAI46_01110 0.27 -1.0 245,665 + IAI46_01110 0.42 +0.9 245,699 + IAI46_01110 0.47 -0.0 245,699 + IAI46_01110 0.47 +0.6 245,699 + IAI46_01110 0.47 +0.4 245,700 - IAI46_01110 0.47 +0.1 245,700 - IAI46_01110 0.47 +0.9 245,700 - IAI46_01110 0.47 -0.1 245,700 - IAI46_01110 0.47 +0.6 245,709 + IAI46_01110 0.48 +0.0 245,710 - IAI46_01110 0.48 -0.2 245,732 + IAI46_01110 0.51 +0.3 245,732 + IAI46_01110 0.51 -1.1 245,768 + IAI46_01110 0.56 -0.8 245,768 + IAI46_01110 0.56 +0.5 245,768 + IAI46_01110 0.56 +1.2 245,769 - IAI46_01110 0.56 +0.4 245,769 - IAI46_01110 0.56 +0.3 245,769 - IAI46_01110 0.56 +0.4 245,780 + IAI46_01110 0.58 -0.4 245,781 - IAI46_01110 0.58 +0.0 245,792 - IAI46_01110 0.59 +0.1 245,792 - IAI46_01110 0.59 +0.8 245,835 + IAI46_01110 0.65 -0.2 245,835 + IAI46_01110 0.65 +0.2 245,835 + IAI46_01110 0.65 +0.0 245,835 + IAI46_01110 0.65 +0.1 245,836 - IAI46_01110 0.65 +0.1 245,849 + IAI46_01110 0.67 -0.4 245,853 - IAI46_01110 0.68 +1.0 245,963 + IAI46_01110 0.83 +0.5 245,964 - IAI46_01110 0.83 +0.8 245,976 + IAI46_01110 0.85 +0.2 245,981 + IAI46_01110 0.85 +0.0 245,981 + IAI46_01110 0.85 -0.1 246,074 + +0.0 246,146 + +0.3 246,146 + +0.1 246,146 + +0.6 246,147 - +0.7 246,147 - +1.2 246,147 - -0.1 246,148 + +0.2 246,148 + -0.1 246,172 + -0.9
Or see this region's nucleotide sequence