Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4331 and Echvi_4332 are separated by 182 nucleotides Echvi_4332 and Echvi_4333 are separated by 137 nucleotides
Echvi_4331: Echvi_4331 - Uncharacterized iron-regulated membrane protein, at 5,177,797 to 5,179,020
_4331
Echvi_4332: Echvi_4332 - Predicted ATPase, at 5,179,203 to 5,179,778
_4332
Echvi_4333: Echvi_4333 - hypothetical protein, at 5,179,916 to 5,180,566
_4333
Position (kb)
5179
5180 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5178.287 kb on + strand, within Echvi_4331 at 5178.288 kb on - strand, within Echvi_4331 at 5178.323 kb on + strand, within Echvi_4331 at 5178.409 kb on + strand, within Echvi_4331 at 5178.410 kb on - strand, within Echvi_4331 at 5178.436 kb on + strand, within Echvi_4331 at 5178.436 kb on + strand, within Echvi_4331 at 5178.437 kb on - strand, within Echvi_4331 at 5178.480 kb on - strand, within Echvi_4331 at 5178.597 kb on - strand, within Echvi_4331 at 5178.653 kb on - strand, within Echvi_4331 at 5178.728 kb on - strand, within Echvi_4331 at 5178.742 kb on - strand, within Echvi_4331 at 5178.742 kb on - strand, within Echvi_4331 at 5178.751 kb on + strand, within Echvi_4331 at 5178.792 kb on + strand, within Echvi_4331 at 5178.844 kb on - strand, within Echvi_4331 at 5178.844 kb on - strand, within Echvi_4331 at 5178.921 kb on + strand at 5178.921 kb on + strand at 5178.921 kb on + strand at 5178.921 kb on + strand at 5179.058 kb on + strand at 5179.121 kb on - strand at 5179.122 kb on + strand at 5179.150 kb on + strand at 5179.170 kb on + strand at 5179.170 kb on + strand at 5179.204 kb on + strand at 5179.205 kb on - strand at 5179.205 kb on - strand at 5179.224 kb on + strand at 5179.228 kb on + strand at 5179.228 kb on + strand at 5179.236 kb on + strand at 5179.303 kb on + strand, within Echvi_4332 at 5179.304 kb on - strand, within Echvi_4332 at 5179.304 kb on - strand, within Echvi_4332 at 5179.307 kb on + strand, within Echvi_4332 at 5179.401 kb on - strand, within Echvi_4332 at 5179.401 kb on - strand, within Echvi_4332 at 5179.405 kb on - strand, within Echvi_4332 at 5179.405 kb on - strand, within Echvi_4332 at 5179.435 kb on + strand, within Echvi_4332 at 5179.485 kb on + strand, within Echvi_4332 at 5179.485 kb on + strand, within Echvi_4332 at 5179.485 kb on + strand, within Echvi_4332 at 5179.486 kb on - strand, within Echvi_4332 at 5179.747 kb on + strand at 5179.747 kb on + strand at 5179.914 kb on + strand at 5179.915 kb on - strand at 5179.917 kb on + strand at 5179.918 kb on - strand at 5179.918 kb on - strand at 5179.953 kb on + strand at 5179.992 kb on + strand, within Echvi_4333 at 5179.993 kb on - strand, within Echvi_4333 at 5179.993 kb on - strand, within Echvi_4333 at 5180.015 kb on + strand, within Echvi_4333 at 5180.083 kb on - strand, within Echvi_4333 at 5180.086 kb on + strand, within Echvi_4333 at 5180.087 kb on - strand, within Echvi_4333 at 5180.087 kb on - strand, within Echvi_4333 at 5180.087 kb on - strand, within Echvi_4333 at 5180.087 kb on - strand, within Echvi_4333 at 5180.245 kb on + strand, within Echvi_4333 at 5180.283 kb on + strand, within Echvi_4333 at 5180.288 kb on + strand, within Echvi_4333 at 5180.288 kb on + strand, within Echvi_4333 at 5180.339 kb on - strand, within Echvi_4333 at 5180.473 kb on + strand, within Echvi_4333 at 5180.486 kb on + strand, within Echvi_4333 at 5180.493 kb on - strand, within Echvi_4333 at 5180.493 kb on - strand, within Echvi_4333 at 5180.493 kb on - strand, within Echvi_4333 at 5180.556 kb on + strand at 5180.567 kb on + strand at 5180.567 kb on + strand at 5180.568 kb on - strand at 5180.615 kb on + strand at 5180.616 kb on - strand at 5180.616 kb on - strand at 5180.639 kb on + strand at 5180.639 kb on + strand at 5180.640 kb on - strand at 5180.640 kb on - strand at 5180.653 kb on + strand at 5180.678 kb on - strand at 5180.680 kb on - strand at 5180.774 kb on + strand at 5180.774 kb on + strand at 5180.775 kb on - strand at 5180.775 kb on - strand at 5180.775 kb on - strand at 5180.775 kb on - strand at 5180.775 kb on - strand at 5180.775 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 5,178,287 + Echvi_4331 0.40 +0.6 5,178,288 - Echvi_4331 0.40 +1.1 5,178,323 + Echvi_4331 0.43 +0.4 5,178,409 + Echvi_4331 0.50 -1.6 5,178,410 - Echvi_4331 0.50 -1.8 5,178,436 + Echvi_4331 0.52 -0.6 5,178,436 + Echvi_4331 0.52 -0.3 5,178,437 - Echvi_4331 0.52 +0.6 5,178,480 - Echvi_4331 0.56 +0.5 5,178,597 - Echvi_4331 0.65 -1.1 5,178,653 - Echvi_4331 0.70 +0.9 5,178,728 - Echvi_4331 0.76 +0.1 5,178,742 - Echvi_4331 0.77 +0.1 5,178,742 - Echvi_4331 0.77 -0.8 5,178,751 + Echvi_4331 0.78 -0.6 5,178,792 + Echvi_4331 0.81 -0.8 5,178,844 - Echvi_4331 0.86 +0.6 5,178,844 - Echvi_4331 0.86 -0.4 5,178,921 + -0.2 5,178,921 + +0.4 5,178,921 + -0.2 5,178,921 + -0.4 5,179,058 + -0.6 5,179,121 - +1.2 5,179,122 + -1.1 5,179,150 + -0.3 5,179,170 + -0.2 5,179,170 + -1.0 5,179,204 + -0.2 5,179,205 - -0.2 5,179,205 - +0.8 5,179,224 + -0.3 5,179,228 + -1.5 5,179,228 + +0.8 5,179,236 + -0.3 5,179,303 + Echvi_4332 0.17 -0.8 5,179,304 - Echvi_4332 0.18 -1.4 5,179,304 - Echvi_4332 0.18 +0.2 5,179,307 + Echvi_4332 0.18 -0.2 5,179,401 - Echvi_4332 0.34 -1.6 5,179,401 - Echvi_4332 0.34 -1.0 5,179,405 - Echvi_4332 0.35 -0.0 5,179,405 - Echvi_4332 0.35 -2.7 5,179,435 + Echvi_4332 0.40 -1.6 5,179,485 + Echvi_4332 0.49 +0.8 5,179,485 + Echvi_4332 0.49 -0.4 5,179,485 + Echvi_4332 0.49 -0.6 5,179,486 - Echvi_4332 0.49 +0.4 5,179,747 + -0.9 5,179,747 + -0.4 5,179,914 + -0.6 5,179,915 - -0.1 5,179,917 + +0.4 5,179,918 - +0.1 5,179,918 - -0.5 5,179,953 + -0.0 5,179,992 + Echvi_4333 0.12 -2.2 5,179,993 - Echvi_4333 0.12 -1.5 5,179,993 - Echvi_4333 0.12 -1.8 5,180,015 + Echvi_4333 0.15 +0.1 5,180,083 - Echvi_4333 0.26 -1.0 5,180,086 + Echvi_4333 0.26 -0.1 5,180,087 - Echvi_4333 0.26 -0.3 5,180,087 - Echvi_4333 0.26 +0.4 5,180,087 - Echvi_4333 0.26 +0.2 5,180,087 - Echvi_4333 0.26 -1.2 5,180,245 + Echvi_4333 0.51 +0.2 5,180,283 + Echvi_4333 0.56 +0.5 5,180,288 + Echvi_4333 0.57 +0.0 5,180,288 + Echvi_4333 0.57 -0.1 5,180,339 - Echvi_4333 0.65 -1.1 5,180,473 + Echvi_4333 0.86 +0.6 5,180,486 + Echvi_4333 0.88 +0.6 5,180,493 - Echvi_4333 0.89 +0.7 5,180,493 - Echvi_4333 0.89 +0.9 5,180,493 - Echvi_4333 0.89 -0.3 5,180,556 + -1.1 5,180,567 + +0.5 5,180,567 + -0.7 5,180,568 - +0.0 5,180,615 + +2.1 5,180,616 - +0.2 5,180,616 - +2.7 5,180,639 + +0.8 5,180,639 + -0.8 5,180,640 - +1.1 5,180,640 - -0.5 5,180,653 + +1.1 5,180,678 - -1.0 5,180,680 - +0.1 5,180,774 + -0.0 5,180,774 + +0.2 5,180,775 - -0.6 5,180,775 - +0.1 5,180,775 - -0.2 5,180,775 - -0.1 5,180,775 - -1.3 5,180,775 - +2.1
Or see this region's nucleotide sequence