Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3995

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
4,790,037	+				+2.3
4,790,038	-		Echvi_3993	0.85	+0.2
4,790,100	-				-0.1
4,790,103	+				-0.5
4,790,133	-				+0.4
4,790,167	+				-1.3
4,790,168	-				+0.3
4,790,168	-				+0.3
4,790,177	+				-0.1
4,790,183	+				-0.6
4,790,184	-				-0.2
4,790,184	-				+0.2
4,790,243	+		Echvi_3994	0.12	+0.5
4,790,325	+		Echvi_3994	0.22	+0.5
4,790,474	+		Echvi_3994	0.39	+0.7
4,790,474	+		Echvi_3994	0.39	+0.1
4,790,495	+		Echvi_3994	0.42	-0.3
4,790,495	+		Echvi_3994	0.42	-0.0
4,790,581	-		Echvi_3994	0.52	+0.3
4,790,608	+		Echvi_3994	0.55	-0.8
4,790,608	+		Echvi_3994	0.55	+0.3
4,790,608	+		Echvi_3994	0.55	-0.7
4,790,736	+		Echvi_3994	0.70	-0.6
4,790,742	+		Echvi_3994	0.70	+0.1
4,790,743	-		Echvi_3994	0.70	+0.2
4,790,757	+		Echvi_3994	0.72	+0.2
4,790,758	-		Echvi_3994	0.72	+0.2
4,790,765	+		Echvi_3994	0.73	-0.8
4,790,771	+		Echvi_3994	0.74	-0.7
4,790,771	+		Echvi_3994	0.74	-0.3
4,790,772	-		Echvi_3994	0.74	-0.1
4,790,772	-		Echvi_3994	0.74	-1.6
4,790,772	-		Echvi_3994	0.74	-2.0
4,790,772	-		Echvi_3994	0.74	+0.2
4,790,774	-		Echvi_3994	0.74	-0.3
4,790,822	+		Echvi_3994	0.80	+1.1
4,790,862	+		Echvi_3994	0.84	+0.6
4,790,868	+		Echvi_3994	0.85	+0.1
4,790,885	+		Echvi_3994	0.87	-0.7
4,790,885	+		Echvi_3994	0.87	-0.4
4,790,888	-		Echvi_3994	0.87	-0.5
4,790,889	+		Echvi_3994	0.87	-0.6
4,790,889	+		Echvi_3994	0.87	-0.8
4,790,890	-		Echvi_3994	0.87	+0.3
4,790,890	-		Echvi_3994	0.87	+2.0
4,790,890	-		Echvi_3994	0.87	-1.4
4,790,920	+				-0.9
4,790,921	-				+1.0
4,790,921	-				-1.0
4,790,921	-				-0.4
4,790,938	+				-1.7
4,790,938	+				-0.1
4,790,942	+				+1.2
4,790,943	-				-0.3
4,790,943	-				-0.6
4,790,943	-				+0.1
4,790,943	-				-1.0
4,790,954	+				-2.1
4,790,955	-				+1.6
4,790,979	+				+0.5
4,790,980	-				-0.3
4,791,067	-		Echvi_3995	0.61	-0.8
4,791,078	+		Echvi_3995	0.73	+0.3
4,791,078	+		Echvi_3995	0.73	-0.8
4,791,095	-				+1.4
4,791,095	-				-0.7
4,791,126	+				-1.1
4,791,137	+				+0.6
4,791,137	+				-0.6
4,791,182	+				+0.6
4,791,183	-				-1.5
4,791,183	-				-0.7
4,791,210	+				-0.3
4,791,211	-				+1.0
4,791,297	+				-0.3
4,791,297	+				+0.5
4,791,297	+				-0.3
4,791,306	+				+0.1
4,791,306	+				-0.5
4,791,307	-				+0.7
4,791,332	-				+0.5
4,791,399	+		Echvi_3996	0.12	+0.2
4,791,399	+		Echvi_3996	0.12	-1.7
4,791,399	+		Echvi_3996	0.12	-0.5
4,791,401	+		Echvi_3996	0.12	-0.7
4,791,401	+		Echvi_3996	0.12	-0.9
4,791,401	+		Echvi_3996	0.12	-0.2
4,791,402	-		Echvi_3996	0.12	+0.1
4,791,444	+		Echvi_3996	0.19	-0.2
4,791,444	+		Echvi_3996	0.19	+0.0
4,791,444	+		Echvi_3996	0.19	+0.4
4,791,444	+		Echvi_3996	0.19	-0.8
4,791,445	-		Echvi_3996	0.19	+0.8
4,791,445	-		Echvi_3996	0.19	-0.3
4,791,445	-		Echvi_3996	0.19	+0.0
4,791,543	+		Echvi_3996	0.33	+0.8
4,791,581	+		Echvi_3996	0.39	-2.4
4,791,582	-		Echvi_3996	0.39	+1.0
4,791,701	+		Echvi_3996	0.57	+1.6
4,791,701	+		Echvi_3996	0.57	-0.3
4,791,702	-		Echvi_3996	0.57	-1.4
4,791,702	-		Echvi_3996	0.57	-0.6
4,791,702	-		Echvi_3996	0.57	+1.1
4,791,742	-		Echvi_3996	0.63	+0.3
4,791,973	-				+0.6
4,792,018	-				+0.7
4,792,018	-				-0.4
4,792,063	+		Echvi_3997	0.11	-0.0
4,792,065	+		Echvi_3997	0.13	-0.6
4,792,065	+		Echvi_3997	0.13	+0.6
4,792,066	-		Echvi_3997	0.14	+0.2