Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3341

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
3,944,296	+		Echvi_3338	0.81	-0.9
3,944,302	+		Echvi_3338	0.81	+0.7
3,944,303	-		Echvi_3338	0.81	-0.6
3,944,303	-		Echvi_3338	0.81	-0.1
3,944,382	+		Echvi_3338	0.87	-1.7
3,944,437	+				-2.2
3,944,437	+				-0.2
3,944,438	-				+0.0
3,944,452	-				-1.0
3,944,463	+				+0.8
3,944,486	-				+0.3
3,944,486	-				+0.2
3,944,486	-				+0.1
3,944,486	-				+0.2
3,944,545	+				-0.5
3,944,545	+				-0.0
3,944,550	-				-1.7
3,944,656	+		Echvi_3339	0.78	+0.1
3,944,683	-				+0.4
3,944,792	-		Echvi_3340	0.16	-1.5
3,944,792	-		Echvi_3340	0.16	+0.4
3,944,792	-		Echvi_3340	0.16	+0.8
3,944,817	+		Echvi_3340	0.22	-0.4
3,944,817	+		Echvi_3340	0.22	+1.2
3,944,932	+		Echvi_3340	0.47	-0.7
3,944,943	+		Echvi_3340	0.50	-0.0
3,944,943	+		Echvi_3340	0.50	-0.3
3,944,943	+		Echvi_3340	0.50	-0.4
3,944,991	+		Echvi_3340	0.60	+1.3
3,944,992	-		Echvi_3340	0.61	+0.2
3,945,038	+		Echvi_3340	0.71	+0.7
3,945,049	+		Echvi_3340	0.73	+0.1
3,945,050	-		Echvi_3340	0.74	-0.9
3,945,050	-		Echvi_3340	0.74	+0.1
3,945,071	+		Echvi_3340	0.78	+0.9
3,945,102	-		Echvi_3340	0.85	-0.3
3,945,103	+		Echvi_3340	0.85	-0.3
3,945,104	-		Echvi_3340	0.86	+0.1
3,945,179	-				+0.2
3,945,258	+				-1.3
3,945,305	-				+1.0
3,945,310	+				-0.1
3,945,432	+		Echvi_3341	0.34	+1.7
3,945,432	+		Echvi_3341	0.34	+0.9
3,945,490	+		Echvi_3341	0.47	+0.5
3,945,491	-		Echvi_3341	0.48	+0.2
3,945,492	+		Echvi_3341	0.48	+1.4
3,945,492	+		Echvi_3341	0.48	+0.1
3,945,492	+		Echvi_3341	0.48	+0.3
3,945,493	-		Echvi_3341	0.48	+0.2
3,945,493	-		Echvi_3341	0.48	-0.9
3,945,494	+		Echvi_3341	0.48	+1.5
3,945,495	-		Echvi_3341	0.49	-0.5
3,945,502	-		Echvi_3341	0.50	-1.3
3,945,502	-		Echvi_3341	0.50	-0.4
3,945,512	+		Echvi_3341	0.52	-0.8
3,945,512	+		Echvi_3341	0.52	+0.4
3,945,680	+				+0.5
3,945,689	+				-0.5
3,945,690	-				-0.0
3,945,690	-				+0.1
3,945,690	-				-0.6
3,945,796	-				+0.3
3,945,829	+				+1.2
3,945,847	+				-0.1
3,945,848	-				+0.1
3,945,855	-		Echvi_3342	0.11	-0.3
3,945,855	-		Echvi_3342	0.11	+0.6
3,945,868	-		Echvi_3342	0.14	-0.5
3,945,894	-		Echvi_3342	0.20	-0.6
3,945,928	+		Echvi_3342	0.28	+1.1
3,945,928	+		Echvi_3342	0.28	-0.2
3,946,013	+		Echvi_3342	0.48	-1.6
3,946,014	-		Echvi_3342	0.48	+0.9
3,946,014	-		Echvi_3342	0.48	+0.1
3,946,014	-		Echvi_3342	0.48	-0.1
3,946,136	+		Echvi_3342	0.77	-0.9
3,946,137	-		Echvi_3342	0.78	-0.6
3,946,137	-		Echvi_3342	0.78	-0.1
3,946,176	-		Echvi_3342	0.87	-0.4
3,946,223	-				+1.7
3,946,251	-				-0.5
3,946,353	-				+0.6
3,946,384	+				-0.9
3,946,440	+				-0.2
3,946,442	+				+1.2
3,946,473	-				-0.0
3,946,473	-				-1.6
3,946,473	-				+0.4
3,946,490	+				+0.2
3,946,490	+				+0.5
3,946,490	+				-0.2
3,946,490	+				-0.6
3,946,491	-				+0.7
3,946,491	-				+0.8
3,946,491	-				+1.2
3,946,511	-		Echvi_3343	0.11	-0.4
3,946,535	+		Echvi_3343	0.12	+2.2
3,946,536	-		Echvi_3343	0.12	+0.5
3,946,536	-		Echvi_3343	0.12	-0.2
3,946,546	-		Echvi_3343	0.13	+1.5
3,946,546	-		Echvi_3343	0.13	+0.2
3,946,566	-		Echvi_3343	0.14	+0.1
3,946,573	-		Echvi_3343	0.15	+1.7
3,946,579	+		Echvi_3343	0.15	+0.4
3,946,579	+		Echvi_3343	0.15	+0.2
3,946,614	+		Echvi_3343	0.17	-0.4
3,946,651	+		Echvi_3343	0.19	+0.2
3,946,652	-		Echvi_3343	0.19	+0.0
3,946,652	-		Echvi_3343	0.19	+0.1
3,946,663	+		Echvi_3343	0.20	-0.2
3,946,663	+		Echvi_3343	0.20	-1.4
3,946,674	-		Echvi_3343	0.21	-0.5