Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1741
Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,051,473 | + | -1.7 | |||
2,052,611 | + | -1.3 | |||
2,052,989 | - | Echvi_1742 | 0.80 | -1.1 | |
2,053,022 | - | Echvi_1742 | 0.88 | -2.3 | |
2,053,031 | - | Echvi_1742 | 0.90 | +1.8 | |
2,053,031 | - | Echvi_1742 | 0.90 | -0.9 | |
2,053,067 | + | +0.9 | |||
2,053,067 | + | -2.4 | |||
2,053,086 | + | -1.5 | |||
2,053,109 | + | -1.0 | |||
2,053,220 | + | Echvi_1743 | 0.16 | -1.3 | |
2,053,286 | + | Echvi_1743 | 0.23 | -0.9 | |
2,053,286 | + | Echvi_1743 | 0.23 | -0.2 | |
2,053,500 | + | Echvi_1743 | 0.47 | -1.4 | |
2,053,597 | + | Echvi_1743 | 0.58 | -1.2 |
Or see this region's nucleotide sequence