Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21425 and CA264_21430 are separated by 375 nucleotides CA264_21430 and CA264_21435 are separated by 259 nucleotides CA264_21435 and CA264_21440 are separated by 153 nucleotides
CA264_21425: CA264_21425 - copper-translocating P-type ATPase, at 148,859 to 151,126
_21425
CA264_21430: CA264_21430 - DDE transposase, at 151,502 to 152,329
_21430
CA264_21435: CA264_21435 - hypothetical protein, at 152,589 to 152,876
_21435
CA264_21440: CA264_21440 - metal transporter, at 153,030 to 154,310
_21440
Position (kb)
151
152
153 Strain fitness (log2 ratio)
-2
-1
0
1 at 150.519 kb on + strand, within CA264_21425 at 150.519 kb on + strand, within CA264_21425 at 150.520 kb on - strand, within CA264_21425 at 150.520 kb on - strand, within CA264_21425 at 150.572 kb on - strand, within CA264_21425 at 150.602 kb on - strand, within CA264_21425 at 150.611 kb on + strand, within CA264_21425 at 150.685 kb on - strand, within CA264_21425 at 150.776 kb on - strand, within CA264_21425 at 150.934 kb on + strand at 150.934 kb on + strand at 150.935 kb on - strand at 150.935 kb on - strand at 150.936 kb on + strand at 150.936 kb on + strand at 151.001 kb on + strand at 151.043 kb on - strand at 151.048 kb on + strand at 151.081 kb on + strand at 151.099 kb on + strand at 151.100 kb on - strand at 151.112 kb on + strand at 151.112 kb on + strand at 151.113 kb on - strand at 151.117 kb on + strand at 151.186 kb on + strand at 151.190 kb on - strand at 151.227 kb on - strand at 151.227 kb on - strand at 151.236 kb on + strand at 151.243 kb on + strand at 151.244 kb on - strand at 151.258 kb on + strand at 151.309 kb on + strand at 151.323 kb on + strand at 151.323 kb on + strand at 151.324 kb on - strand at 151.324 kb on - strand at 151.328 kb on - strand at 151.332 kb on + strand at 151.375 kb on + strand at 151.388 kb on - strand at 151.409 kb on + strand at 151.409 kb on + strand at 151.415 kb on - strand at 151.434 kb on + strand at 151.495 kb on + strand at 151.527 kb on + strand at 151.527 kb on + strand at 151.528 kb on - strand at 151.528 kb on - strand at 151.528 kb on - strand at 151.532 kb on - strand at 151.600 kb on - strand, within CA264_21430 at 151.603 kb on - strand, within CA264_21430 at 151.616 kb on + strand, within CA264_21430 at 151.617 kb on - strand, within CA264_21430 at 151.618 kb on + strand, within CA264_21430 at 151.618 kb on + strand, within CA264_21430 at 151.618 kb on + strand, within CA264_21430 at 151.619 kb on - strand, within CA264_21430 at 151.619 kb on - strand, within CA264_21430 at 151.619 kb on - strand, within CA264_21430 at 151.624 kb on + strand, within CA264_21430 at 151.624 kb on + strand, within CA264_21430 at 151.624 kb on + strand, within CA264_21430 at 151.700 kb on + strand, within CA264_21430 at 151.701 kb on - strand, within CA264_21430 at 151.704 kb on - strand, within CA264_21430 at 151.783 kb on + strand, within CA264_21430 at 151.798 kb on - strand, within CA264_21430 at 151.811 kb on - strand, within CA264_21430 at 151.909 kb on + strand, within CA264_21430 at 152.094 kb on + strand, within CA264_21430 at 152.144 kb on + strand, within CA264_21430 at 152.144 kb on + strand, within CA264_21430 at 152.150 kb on + strand, within CA264_21430 at 152.151 kb on - strand, within CA264_21430 at 152.151 kb on - strand, within CA264_21430 at 152.184 kb on + strand, within CA264_21430 at 152.188 kb on - strand, within CA264_21430 at 152.341 kb on - strand at 152.341 kb on - strand at 152.341 kb on - strand at 152.373 kb on - strand at 152.377 kb on - strand at 152.377 kb on - strand at 152.394 kb on - strand at 152.399 kb on + strand at 152.425 kb on + strand at 152.441 kb on + strand at 152.441 kb on + strand at 152.447 kb on + strand at 152.526 kb on - strand at 152.526 kb on - strand at 152.526 kb on - strand at 152.637 kb on - strand, within CA264_21435 at 152.693 kb on - strand, within CA264_21435 at 153.115 kb on - strand at 153.310 kb on - strand, within CA264_21440
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 150,519 + CA264_21425 0.73 +0.1 150,519 + CA264_21425 0.73 -0.5 150,520 - CA264_21425 0.73 -0.4 150,520 - CA264_21425 0.73 -0.4 150,572 - CA264_21425 0.76 +0.2 150,602 - CA264_21425 0.77 -0.5 150,611 + CA264_21425 0.77 -0.3 150,685 - CA264_21425 0.81 -0.2 150,776 - CA264_21425 0.85 -0.3 150,934 + +0.7 150,934 + -0.1 150,935 - +0.7 150,935 - -0.9 150,936 + -1.6 150,936 + -1.4 151,001 + -0.6 151,043 - -0.7 151,048 + -0.4 151,081 + -1.4 151,099 + -0.4 151,100 - -0.5 151,112 + +0.8 151,112 + -0.3 151,113 - -0.5 151,117 + +0.4 151,186 + -0.6 151,190 - +1.0 151,227 - -0.6 151,227 - -0.1 151,236 + -0.0 151,243 + +0.3 151,244 - -0.1 151,258 + -0.6 151,309 + +0.1 151,323 + -0.5 151,323 + +0.1 151,324 - +0.5 151,324 - -0.0 151,328 - +0.0 151,332 + -0.5 151,375 + -0.5 151,388 - +1.5 151,409 + +0.3 151,409 + -0.7 151,415 - +0.3 151,434 + -0.1 151,495 + -0.3 151,527 + -0.2 151,527 + +1.0 151,528 - -0.0 151,528 - -1.1 151,528 - -0.3 151,532 - -0.1 151,600 - CA264_21430 0.12 +0.3 151,603 - CA264_21430 0.12 -0.9 151,616 + CA264_21430 0.14 -0.4 151,617 - CA264_21430 0.14 -0.5 151,618 + CA264_21430 0.14 -0.8 151,618 + CA264_21430 0.14 -0.4 151,618 + CA264_21430 0.14 +0.7 151,619 - CA264_21430 0.14 -1.2 151,619 - CA264_21430 0.14 +1.0 151,619 - CA264_21430 0.14 +0.5 151,624 + CA264_21430 0.15 +0.5 151,624 + CA264_21430 0.15 -0.1 151,624 + CA264_21430 0.15 -0.5 151,700 + CA264_21430 0.24 -0.5 151,701 - CA264_21430 0.24 -1.9 151,704 - CA264_21430 0.24 -0.8 151,783 + CA264_21430 0.34 -1.1 151,798 - CA264_21430 0.36 +1.4 151,811 - CA264_21430 0.37 -0.4 151,909 + CA264_21430 0.49 -0.2 152,094 + CA264_21430 0.71 -0.0 152,144 + CA264_21430 0.78 +0.0 152,144 + CA264_21430 0.78 +0.3 152,150 + CA264_21430 0.78 +0.7 152,151 - CA264_21430 0.78 -1.6 152,151 - CA264_21430 0.78 -0.9 152,184 + CA264_21430 0.82 -0.8 152,188 - CA264_21430 0.83 +0.2 152,341 - -0.1 152,341 - -0.1 152,341 - -0.4 152,373 - -1.5 152,377 - -0.4 152,377 - -0.1 152,394 - -0.5 152,399 + +0.0 152,425 + -1.5 152,441 + -0.9 152,441 + -0.1 152,447 + +0.4 152,526 - +0.1 152,526 - -0.1 152,526 - +0.0 152,637 - CA264_21435 0.17 -0.8 152,693 - CA264_21435 0.36 -2.4 153,115 - -0.5 153,310 - CA264_21440 0.22 -0.1
Or see this region's nucleotide sequence