Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19775 and CA264_19780 are separated by 87 nucleotides CA264_19780 and CA264_19785 are separated by 388 nucleotides CA264_19785 and CA264_19790 are separated by 214 nucleotides
CA264_19775: CA264_19775 - aldose epimerase, at 4,563,699 to 4,564,574
_19775
CA264_19780: CA264_19780 - hypothetical protein, at 4,564,662 to 4,564,910
_19780
CA264_19785: CA264_19785 - TonB-dependent receptor, at 4,565,299 to 4,567,731
_19785
CA264_19790: CA264_19790 - acyl-CoA dehydrogenase, at 4,567,946 to 4,569,124
_19790
Position (kb)
4565
4566
4567
4568 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4564.303 kb on - strand, within CA264_19775 at 4564.315 kb on + strand, within CA264_19775 at 4564.315 kb on + strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.557 kb on - strand at 4564.589 kb on - strand at 4564.612 kb on + strand at 4564.613 kb on - strand at 4564.613 kb on - strand at 4564.663 kb on + strand at 4564.699 kb on - strand, within CA264_19780 at 4564.714 kb on + strand, within CA264_19780 at 4564.726 kb on + strand, within CA264_19780 at 4564.726 kb on + strand, within CA264_19780 at 4564.726 kb on + strand, within CA264_19780 at 4564.858 kb on + strand, within CA264_19780 at 4564.858 kb on + strand, within CA264_19780 at 4564.859 kb on - strand, within CA264_19780 at 4564.861 kb on + strand, within CA264_19780 at 4564.861 kb on + strand, within CA264_19780 at 4564.862 kb on - strand, within CA264_19780 at 4564.862 kb on - strand, within CA264_19780 at 4564.871 kb on + strand, within CA264_19780 at 4564.871 kb on + strand, within CA264_19780 at 4564.871 kb on + strand, within CA264_19780 at 4564.871 kb on + strand, within CA264_19780 at 4564.872 kb on - strand, within CA264_19780 at 4564.872 kb on - strand, within CA264_19780 at 4564.872 kb on - strand, within CA264_19780 at 4564.876 kb on - strand, within CA264_19780 at 4564.891 kb on + strand at 4564.891 kb on + strand at 4564.892 kb on - strand at 4564.892 kb on - strand at 4564.892 kb on - strand at 4564.892 kb on - strand at 4564.894 kb on - strand at 4564.894 kb on - strand at 4564.894 kb on - strand at 4564.896 kb on + strand at 4564.896 kb on + strand at 4564.896 kb on + strand at 4564.896 kb on + strand at 4564.897 kb on - strand at 4564.897 kb on - strand at 4564.903 kb on - strand at 4564.927 kb on + strand at 4564.988 kb on + strand at 4564.988 kb on + strand at 4564.988 kb on + strand at 4564.988 kb on + strand at 4564.998 kb on + strand at 4564.998 kb on + strand at 4564.999 kb on - strand at 4564.999 kb on - strand at 4565.008 kb on + strand at 4565.009 kb on - strand at 4565.009 kb on - strand at 4565.102 kb on - strand at 4565.120 kb on - strand at 4565.133 kb on + strand at 4565.145 kb on + strand at 4565.160 kb on + strand at 4565.160 kb on + strand at 4565.182 kb on - strand at 4565.225 kb on - strand at 4565.268 kb on + strand at 4565.279 kb on + strand at 4565.282 kb on + strand at 4565.309 kb on + strand at 4565.309 kb on + strand at 4565.333 kb on + strand at 4565.471 kb on - strand at 4565.501 kb on - strand at 4565.513 kb on + strand at 4565.513 kb on + strand at 4565.519 kb on - strand at 4565.527 kb on + strand at 4565.581 kb on - strand, within CA264_19785 at 4565.655 kb on + strand, within CA264_19785 at 4565.912 kb on + strand, within CA264_19785 at 4565.912 kb on + strand, within CA264_19785 at 4565.912 kb on + strand, within CA264_19785 at 4565.912 kb on + strand, within CA264_19785 at 4565.913 kb on - strand, within CA264_19785 at 4566.094 kb on - strand, within CA264_19785 at 4566.094 kb on - strand, within CA264_19785 at 4566.133 kb on + strand, within CA264_19785 at 4566.134 kb on - strand, within CA264_19785 at 4566.137 kb on + strand, within CA264_19785 at 4566.137 kb on + strand, within CA264_19785 at 4566.137 kb on + strand, within CA264_19785 at 4566.137 kb on + strand, within CA264_19785 at 4566.137 kb on + strand, within CA264_19785 at 4566.137 kb on + strand, within CA264_19785 at 4566.138 kb on - strand, within CA264_19785 at 4566.138 kb on - strand, within CA264_19785 at 4566.138 kb on - strand, within CA264_19785 at 4566.170 kb on - strand, within CA264_19785 at 4566.170 kb on - strand, within CA264_19785 at 4566.170 kb on - strand, within CA264_19785 at 4566.242 kb on - strand, within CA264_19785 at 4566.292 kb on + strand, within CA264_19785 at 4566.355 kb on + strand, within CA264_19785 at 4566.433 kb on + strand, within CA264_19785 at 4566.439 kb on + strand, within CA264_19785 at 4566.460 kb on + strand, within CA264_19785 at 4566.461 kb on - strand, within CA264_19785 at 4566.534 kb on + strand, within CA264_19785 at 4566.535 kb on - strand, within CA264_19785 at 4566.538 kb on + strand, within CA264_19785 at 4566.539 kb on - strand, within CA264_19785 at 4566.539 kb on - strand, within CA264_19785 at 4566.556 kb on + strand, within CA264_19785 at 4566.556 kb on + strand, within CA264_19785 at 4566.557 kb on - strand, within CA264_19785 at 4566.622 kb on + strand, within CA264_19785 at 4566.622 kb on + strand, within CA264_19785 at 4566.622 kb on + strand, within CA264_19785 at 4566.622 kb on + strand, within CA264_19785 at 4566.623 kb on - strand, within CA264_19785 at 4566.691 kb on + strand, within CA264_19785 at 4566.695 kb on - strand, within CA264_19785 at 4566.712 kb on - strand, within CA264_19785 at 4566.723 kb on + strand, within CA264_19785 at 4566.754 kb on - strand, within CA264_19785 at 4566.754 kb on - strand, within CA264_19785 at 4566.788 kb on - strand, within CA264_19785 at 4566.803 kb on - strand, within CA264_19785 at 4566.886 kb on - strand, within CA264_19785 at 4566.889 kb on + strand, within CA264_19785 at 4566.890 kb on - strand, within CA264_19785 at 4566.916 kb on + strand, within CA264_19785 at 4567.021 kb on + strand, within CA264_19785 at 4567.021 kb on + strand, within CA264_19785 at 4567.067 kb on + strand, within CA264_19785 at 4567.068 kb on - strand, within CA264_19785 at 4567.087 kb on + strand, within CA264_19785 at 4567.109 kb on - strand, within CA264_19785 at 4567.109 kb on - strand, within CA264_19785 at 4567.160 kb on + strand, within CA264_19785 at 4567.160 kb on + strand, within CA264_19785 at 4567.183 kb on + strand, within CA264_19785 at 4567.186 kb on - strand, within CA264_19785 at 4567.306 kb on + strand, within CA264_19785 at 4567.306 kb on + strand, within CA264_19785 at 4567.306 kb on + strand, within CA264_19785 at 4567.306 kb on + strand, within CA264_19785 at 4567.306 kb on + strand, within CA264_19785 at 4567.307 kb on - strand, within CA264_19785 at 4567.307 kb on - strand, within CA264_19785 at 4567.307 kb on - strand, within CA264_19785 at 4567.307 kb on - strand, within CA264_19785 at 4567.313 kb on - strand, within CA264_19785 at 4567.313 kb on - strand, within CA264_19785 at 4567.313 kb on - strand, within CA264_19785 at 4567.313 kb on - strand, within CA264_19785 at 4567.313 kb on - strand, within CA264_19785 at 4567.324 kb on + strand, within CA264_19785 at 4567.354 kb on + strand, within CA264_19785 at 4567.431 kb on + strand, within CA264_19785 at 4567.497 kb on + strand at 4567.609 kb on + strand at 4567.625 kb on - strand at 4567.675 kb on + strand at 4567.675 kb on + strand at 4567.675 kb on + strand at 4567.675 kb on + strand at 4567.675 kb on + strand at 4567.676 kb on - strand at 4567.676 kb on - strand at 4567.676 kb on - strand at 4567.676 kb on - strand at 4567.676 kb on - strand at 4567.676 kb on - strand at 4567.678 kb on + strand at 4567.727 kb on + strand at 4567.730 kb on - strand at 4567.796 kb on + strand at 4567.796 kb on + strand at 4567.863 kb on + strand at 4567.875 kb on + strand at 4567.904 kb on - strand at 4567.916 kb on + strand at 4567.916 kb on + strand at 4567.945 kb on + strand at 4567.946 kb on - strand at 4567.946 kb on - strand at 4567.979 kb on + strand at 4567.980 kb on - strand at 4567.981 kb on + strand at 4568.181 kb on - strand, within CA264_19790 at 4568.279 kb on + strand, within CA264_19790 at 4568.285 kb on + strand, within CA264_19790 at 4568.285 kb on + strand, within CA264_19790 at 4568.286 kb on - strand, within CA264_19790 at 4568.286 kb on - strand, within CA264_19790 at 4568.286 kb on - strand, within CA264_19790 at 4568.286 kb on - strand, within CA264_19790 at 4568.287 kb on - strand, within CA264_19790 at 4568.313 kb on - strand, within CA264_19790 at 4568.655 kb on + strand, within CA264_19790 at 4568.655 kb on + strand, within CA264_19790 at 4568.655 kb on + strand, within CA264_19790
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 4,564,303 - CA264_19775 0.69 -0.4 4,564,315 + CA264_19775 0.70 +0.1 4,564,315 + CA264_19775 0.70 +0.5 4,564,316 - CA264_19775 0.70 -0.2 4,564,316 - CA264_19775 0.70 -0.3 4,564,316 - CA264_19775 0.70 +1.2 4,564,316 - CA264_19775 0.70 +0.7 4,564,557 - -0.1 4,564,589 - +0.3 4,564,612 + -2.3 4,564,613 - -0.9 4,564,613 - -0.2 4,564,663 + -0.4 4,564,699 - CA264_19780 0.15 -0.1 4,564,714 + CA264_19780 0.21 -0.8 4,564,726 + CA264_19780 0.26 +0.4 4,564,726 + CA264_19780 0.26 +0.0 4,564,726 + CA264_19780 0.26 +0.0 4,564,858 + CA264_19780 0.79 -0.2 4,564,858 + CA264_19780 0.79 +0.2 4,564,859 - CA264_19780 0.79 +0.8 4,564,861 + CA264_19780 0.80 +0.0 4,564,861 + CA264_19780 0.80 -0.6 4,564,862 - CA264_19780 0.80 +0.5 4,564,862 - CA264_19780 0.80 -1.1 4,564,871 + CA264_19780 0.84 +0.1 4,564,871 + CA264_19780 0.84 -0.5 4,564,871 + CA264_19780 0.84 -0.5 4,564,871 + CA264_19780 0.84 -0.1 4,564,872 - CA264_19780 0.84 +0.9 4,564,872 - CA264_19780 0.84 -2.3 4,564,872 - CA264_19780 0.84 -0.4 4,564,876 - CA264_19780 0.86 -0.7 4,564,891 + -0.1 4,564,891 + -0.2 4,564,892 - -0.1 4,564,892 - +0.4 4,564,892 - -0.4 4,564,892 - +0.5 4,564,894 - -0.0 4,564,894 - -0.2 4,564,894 - -1.2 4,564,896 + -0.8 4,564,896 + -0.0 4,564,896 + +0.6 4,564,896 + +0.3 4,564,897 - -0.2 4,564,897 - -0.2 4,564,903 - +0.0 4,564,927 + +0.1 4,564,988 + -0.8 4,564,988 + -0.2 4,564,988 + +0.5 4,564,988 + +0.5 4,564,998 + +0.1 4,564,998 + +0.0 4,564,999 - -0.3 4,564,999 - -0.2 4,565,008 + +0.7 4,565,009 - -0.2 4,565,009 - +1.0 4,565,102 - +1.3 4,565,120 - +2.1 4,565,133 + +0.9 4,565,145 + +0.1 4,565,160 + +0.5 4,565,160 + +0.1 4,565,182 - +1.4 4,565,225 - +2.0 4,565,268 + +0.8 4,565,279 + -0.0 4,565,282 + +0.3 4,565,309 + +0.6 4,565,309 + +0.5 4,565,333 + +0.0 4,565,471 - +1.5 4,565,501 - +1.1 4,565,513 + -0.8 4,565,513 + +0.2 4,565,519 - +1.4 4,565,527 + -0.3 4,565,581 - CA264_19785 0.12 +1.2 4,565,655 + CA264_19785 0.15 +0.2 4,565,912 + CA264_19785 0.25 +0.8 4,565,912 + CA264_19785 0.25 +0.7 4,565,912 + CA264_19785 0.25 +1.4 4,565,912 + CA264_19785 0.25 +1.5 4,565,913 - CA264_19785 0.25 +1.0 4,566,094 - CA264_19785 0.33 +1.2 4,566,094 - CA264_19785 0.33 +0.7 4,566,133 + CA264_19785 0.34 +0.8 4,566,134 - CA264_19785 0.34 +1.2 4,566,137 + CA264_19785 0.34 +0.9 4,566,137 + CA264_19785 0.34 +1.4 4,566,137 + CA264_19785 0.34 -0.3 4,566,137 + CA264_19785 0.34 +0.6 4,566,137 + CA264_19785 0.34 +0.8 4,566,137 + CA264_19785 0.34 +0.4 4,566,138 - CA264_19785 0.34 +1.1 4,566,138 - CA264_19785 0.34 +1.1 4,566,138 - CA264_19785 0.34 +0.9 4,566,170 - CA264_19785 0.36 +0.9 4,566,170 - CA264_19785 0.36 -0.2 4,566,170 - CA264_19785 0.36 +0.5 4,566,242 - CA264_19785 0.39 +1.9 4,566,292 + CA264_19785 0.41 +0.1 4,566,355 + CA264_19785 0.43 +0.4 4,566,433 + CA264_19785 0.47 -0.3 4,566,439 + CA264_19785 0.47 +0.2 4,566,460 + CA264_19785 0.48 +0.5 4,566,461 - CA264_19785 0.48 +0.4 4,566,534 + CA264_19785 0.51 +0.5 4,566,535 - CA264_19785 0.51 +1.0 4,566,538 + CA264_19785 0.51 +0.3 4,566,539 - CA264_19785 0.51 +1.4 4,566,539 - CA264_19785 0.51 +1.3 4,566,556 + CA264_19785 0.52 +0.3 4,566,556 + CA264_19785 0.52 -0.1 4,566,557 - CA264_19785 0.52 +1.3 4,566,622 + CA264_19785 0.54 +0.7 4,566,622 + CA264_19785 0.54 -0.0 4,566,622 + CA264_19785 0.54 -1.0 4,566,622 + CA264_19785 0.54 +0.9 4,566,623 - CA264_19785 0.54 +0.2 4,566,691 + CA264_19785 0.57 +0.5 4,566,695 - CA264_19785 0.57 -1.3 4,566,712 - CA264_19785 0.58 +1.7 4,566,723 + CA264_19785 0.59 +1.6 4,566,754 - CA264_19785 0.60 +0.6 4,566,754 - CA264_19785 0.60 +1.3 4,566,788 - CA264_19785 0.61 +0.7 4,566,803 - CA264_19785 0.62 +0.4 4,566,886 - CA264_19785 0.65 +0.5 4,566,889 + CA264_19785 0.65 +0.9 4,566,890 - CA264_19785 0.65 +0.5 4,566,916 + CA264_19785 0.66 -0.3 4,567,021 + CA264_19785 0.71 -0.8 4,567,021 + CA264_19785 0.71 +0.4 4,567,067 + CA264_19785 0.73 -1.2 4,567,068 - CA264_19785 0.73 +1.0 4,567,087 + CA264_19785 0.73 +0.6 4,567,109 - CA264_19785 0.74 -1.6 4,567,109 - CA264_19785 0.74 +0.6 4,567,160 + CA264_19785 0.76 -0.1 4,567,160 + CA264_19785 0.76 +0.5 4,567,183 + CA264_19785 0.77 -0.0 4,567,186 - CA264_19785 0.78 +1.0 4,567,306 + CA264_19785 0.82 +0.7 4,567,306 + CA264_19785 0.82 +1.1 4,567,306 + CA264_19785 0.82 -2.3 4,567,306 + CA264_19785 0.82 +1.2 4,567,306 + CA264_19785 0.82 +0.0 4,567,307 - CA264_19785 0.83 +1.3 4,567,307 - CA264_19785 0.83 +1.2 4,567,307 - CA264_19785 0.83 +0.7 4,567,307 - CA264_19785 0.83 +0.9 4,567,313 - CA264_19785 0.83 +1.1 4,567,313 - CA264_19785 0.83 +1.1 4,567,313 - CA264_19785 0.83 +1.5 4,567,313 - CA264_19785 0.83 +0.6 4,567,313 - CA264_19785 0.83 +1.9 4,567,324 + CA264_19785 0.83 -0.7 4,567,354 + CA264_19785 0.84 -0.9 4,567,431 + CA264_19785 0.88 +0.2 4,567,497 + +0.5 4,567,609 + +0.5 4,567,625 - -0.8 4,567,675 + -1.7 4,567,675 + +2.3 4,567,675 + +0.1 4,567,675 + +0.1 4,567,675 + +0.1 4,567,676 - +1.4 4,567,676 - +1.1 4,567,676 - -0.5 4,567,676 - +0.5 4,567,676 - +0.8 4,567,676 - +0.9 4,567,678 + -0.0 4,567,727 + +0.3 4,567,730 - +0.5 4,567,796 + +0.9 4,567,796 + +0.4 4,567,863 + +0.3 4,567,875 + -0.2 4,567,904 - +1.2 4,567,916 + +0.5 4,567,916 + +0.2 4,567,945 + +0.2 4,567,946 - +0.8 4,567,946 - -0.5 4,567,979 + +1.2 4,567,980 - +0.7 4,567,981 + +0.6 4,568,181 - CA264_19790 0.20 +2.5 4,568,279 + CA264_19790 0.28 +0.4 4,568,285 + CA264_19790 0.29 +0.2 4,568,285 + CA264_19790 0.29 -0.3 4,568,286 - CA264_19790 0.29 +1.2 4,568,286 - CA264_19790 0.29 -0.2 4,568,286 - CA264_19790 0.29 +0.2 4,568,286 - CA264_19790 0.29 +1.7 4,568,287 - CA264_19790 0.29 +0.6 4,568,313 - CA264_19790 0.31 -0.5 4,568,655 + CA264_19790 0.60 +0.2 4,568,655 + CA264_19790 0.60 -0.1 4,568,655 + CA264_19790 0.60 -0.3
Or see this region's nucleotide sequence