Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17930 and CA264_17935 are separated by 97 nucleotides CA264_17935 and CA264_17940 are separated by 128 nucleotides CA264_17940 and CA264_17945 are separated by 82 nucleotides
CA264_17930: CA264_17930 - flavonol synthase, at 4,167,974 to 4,168,957
_17930
CA264_17935: CA264_17935 - hypothetical protein, at 4,169,055 to 4,169,897
_17935
CA264_17940: CA264_17940 - hypothetical protein, at 4,170,026 to 4,170,601
_17940
CA264_17945: CA264_17945 - hypothetical protein, at 4,170,684 to 4,171,451
_17945
Position (kb)
4169
4170 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4168.084 kb on + strand, within CA264_17930 at 4168.085 kb on - strand, within CA264_17930 at 4168.217 kb on - strand, within CA264_17930 at 4168.217 kb on - strand, within CA264_17930 at 4168.224 kb on - strand, within CA264_17930 at 4168.229 kb on + strand, within CA264_17930 at 4168.236 kb on - strand, within CA264_17930 at 4168.336 kb on + strand, within CA264_17930 at 4168.337 kb on - strand, within CA264_17930 at 4168.337 kb on - strand, within CA264_17930 at 4168.402 kb on - strand, within CA264_17930 at 4168.537 kb on + strand, within CA264_17930 at 4168.584 kb on + strand, within CA264_17930 at 4168.641 kb on + strand, within CA264_17930 at 4168.734 kb on + strand, within CA264_17930 at 4168.746 kb on - strand, within CA264_17930 at 4168.785 kb on + strand, within CA264_17930 at 4168.786 kb on - strand, within CA264_17930 at 4168.959 kb on + strand at 4168.965 kb on + strand at 4168.971 kb on - strand at 4168.985 kb on + strand at 4169.020 kb on + strand at 4169.050 kb on - strand at 4169.053 kb on - strand at 4169.188 kb on + strand, within CA264_17935 at 4169.188 kb on + strand, within CA264_17935 at 4169.198 kb on - strand, within CA264_17935 at 4169.324 kb on + strand, within CA264_17935 at 4169.324 kb on + strand, within CA264_17935 at 4169.325 kb on - strand, within CA264_17935 at 4169.325 kb on - strand, within CA264_17935 at 4169.337 kb on + strand, within CA264_17935 at 4169.338 kb on - strand, within CA264_17935 at 4169.385 kb on - strand, within CA264_17935 at 4169.445 kb on + strand, within CA264_17935 at 4169.612 kb on + strand, within CA264_17935 at 4169.613 kb on - strand, within CA264_17935 at 4169.613 kb on - strand, within CA264_17935 at 4169.620 kb on - strand, within CA264_17935 at 4169.620 kb on - strand, within CA264_17935 at 4169.641 kb on - strand, within CA264_17935 at 4169.747 kb on + strand, within CA264_17935 at 4169.877 kb on - strand at 4169.877 kb on - strand at 4169.911 kb on - strand at 4169.911 kb on - strand at 4169.911 kb on - strand at 4169.916 kb on + strand at 4169.919 kb on - strand at 4169.925 kb on + strand at 4169.959 kb on + strand at 4169.968 kb on - strand at 4169.992 kb on + strand at 4169.993 kb on - strand at 4170.021 kb on + strand at 4170.022 kb on - strand at 4170.023 kb on + strand at 4170.023 kb on + strand at 4170.023 kb on + strand at 4170.024 kb on - strand at 4170.024 kb on - strand at 4170.024 kb on - strand at 4170.042 kb on + strand at 4170.043 kb on - strand at 4170.187 kb on + strand, within CA264_17940 at 4170.187 kb on + strand, within CA264_17940 at 4170.187 kb on + strand, within CA264_17940 at 4170.188 kb on - strand, within CA264_17940 at 4170.188 kb on - strand, within CA264_17940 at 4170.188 kb on - strand, within CA264_17940 at 4170.188 kb on - strand, within CA264_17940 at 4170.196 kb on + strand, within CA264_17940 at 4170.197 kb on - strand, within CA264_17940 at 4170.197 kb on - strand, within CA264_17940 at 4170.222 kb on + strand, within CA264_17940 at 4170.314 kb on - strand, within CA264_17940 at 4170.501 kb on - strand, within CA264_17940 at 4170.579 kb on - strand at 4170.586 kb on + strand at 4170.640 kb on - strand at 4170.687 kb on + strand at 4170.687 kb on + strand at 4170.687 kb on + strand at 4170.688 kb on - strand at 4170.693 kb on + strand at 4170.693 kb on + strand at 4170.827 kb on + strand, within CA264_17945 at 4170.827 kb on + strand, within CA264_17945 at 4170.828 kb on - strand, within CA264_17945 at 4170.828 kb on - strand, within CA264_17945 at 4170.831 kb on + strand, within CA264_17945 at 4170.832 kb on - strand, within CA264_17945
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 4,168,084 + CA264_17930 0.11 +0.6 4,168,085 - CA264_17930 0.11 -0.2 4,168,217 - CA264_17930 0.25 -0.7 4,168,217 - CA264_17930 0.25 -0.1 4,168,224 - CA264_17930 0.25 +0.7 4,168,229 + CA264_17930 0.26 -0.7 4,168,236 - CA264_17930 0.27 -0.3 4,168,336 + CA264_17930 0.37 +1.1 4,168,337 - CA264_17930 0.37 +0.4 4,168,337 - CA264_17930 0.37 -0.4 4,168,402 - CA264_17930 0.43 +1.0 4,168,537 + CA264_17930 0.57 +0.3 4,168,584 + CA264_17930 0.62 +0.7 4,168,641 + CA264_17930 0.68 +1.2 4,168,734 + CA264_17930 0.77 -0.3 4,168,746 - CA264_17930 0.78 +0.5 4,168,785 + CA264_17930 0.82 -0.2 4,168,786 - CA264_17930 0.83 +0.4 4,168,959 + -1.2 4,168,965 + +0.7 4,168,971 - +0.0 4,168,985 + -0.8 4,169,020 + +0.0 4,169,050 - -1.3 4,169,053 - -1.5 4,169,188 + CA264_17935 0.16 +0.1 4,169,188 + CA264_17935 0.16 +0.3 4,169,198 - CA264_17935 0.17 -0.3 4,169,324 + CA264_17935 0.32 -0.5 4,169,324 + CA264_17935 0.32 +0.6 4,169,325 - CA264_17935 0.32 +0.4 4,169,325 - CA264_17935 0.32 -0.9 4,169,337 + CA264_17935 0.33 +0.0 4,169,338 - CA264_17935 0.34 +0.3 4,169,385 - CA264_17935 0.39 +0.1 4,169,445 + CA264_17935 0.46 -0.3 4,169,612 + CA264_17935 0.66 -2.2 4,169,613 - CA264_17935 0.66 -0.4 4,169,613 - CA264_17935 0.66 -2.6 4,169,620 - CA264_17935 0.67 +2.0 4,169,620 - CA264_17935 0.67 -0.4 4,169,641 - CA264_17935 0.70 +0.1 4,169,747 + CA264_17935 0.82 -0.7 4,169,877 - +0.7 4,169,877 - -1.2 4,169,911 - -1.2 4,169,911 - -0.6 4,169,911 - +1.0 4,169,916 + -0.6 4,169,919 - -0.5 4,169,925 + +0.4 4,169,959 + +0.7 4,169,968 - -0.0 4,169,992 + +0.0 4,169,993 - +0.0 4,170,021 + -0.2 4,170,022 - -0.4 4,170,023 + -0.0 4,170,023 + +1.0 4,170,023 + +0.3 4,170,024 - -0.0 4,170,024 - -0.4 4,170,024 - +0.0 4,170,042 + +0.5 4,170,043 - +0.7 4,170,187 + CA264_17940 0.28 +0.2 4,170,187 + CA264_17940 0.28 -0.5 4,170,187 + CA264_17940 0.28 +0.1 4,170,188 - CA264_17940 0.28 +0.7 4,170,188 - CA264_17940 0.28 -0.0 4,170,188 - CA264_17940 0.28 -0.3 4,170,188 - CA264_17940 0.28 +0.3 4,170,196 + CA264_17940 0.30 -0.2 4,170,197 - CA264_17940 0.30 -1.0 4,170,197 - CA264_17940 0.30 -0.0 4,170,222 + CA264_17940 0.34 +0.2 4,170,314 - CA264_17940 0.50 -0.4 4,170,501 - CA264_17940 0.82 -0.5 4,170,579 - +0.7 4,170,586 + -0.1 4,170,640 - +0.1 4,170,687 + +0.6 4,170,687 + -0.2 4,170,687 + -0.5 4,170,688 - -0.6 4,170,693 + +0.9 4,170,693 + -0.8 4,170,827 + CA264_17945 0.19 -1.0 4,170,827 + CA264_17945 0.19 -0.5 4,170,828 - CA264_17945 0.19 -0.1 4,170,828 - CA264_17945 0.19 +0.0 4,170,831 + CA264_17945 0.19 +0.2 4,170,832 - CA264_17945 0.19 +0.6
Or see this region's nucleotide sequence