Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17720 and CA264_17725 are separated by 147 nucleotides CA264_17725 and CA264_17730 are separated by 20 nucleotides CA264_17730 and CA264_17735 are separated by 797 nucleotides
CA264_17720: CA264_17720 - beta-ketoadipyl CoA thiolase, at 4,122,624 to 4,123,823
_17720
CA264_17725: CA264_17725 - tRNA pseudouridine synthase A, at 4,123,971 to 4,124,723
_17725
CA264_17730: CA264_17730 - methionine gamma-lyase, at 4,124,744 to 4,126,051
_17730
CA264_17735: CA264_17735 - antibiotic ABC transporter ATP-binding protein, at 4,126,849 to 4,128,618
_17735
Position (kb)
4124
4125
4126
4127 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4123.765 kb on + strand at 4123.804 kb on + strand at 4123.810 kb on - strand at 4123.820 kb on - strand at 4123.821 kb on + strand at 4123.822 kb on - strand at 4123.822 kb on - strand at 4123.822 kb on - strand at 4123.960 kb on - strand at 4123.990 kb on + strand at 4124.071 kb on + strand, within CA264_17725 at 4124.075 kb on + strand, within CA264_17725 at 4124.080 kb on + strand, within CA264_17725 at 4124.080 kb on + strand, within CA264_17725 at 4124.124 kb on - strand, within CA264_17725 at 4124.192 kb on - strand, within CA264_17725 at 4124.244 kb on + strand, within CA264_17725 at 4124.245 kb on - strand, within CA264_17725 at 4124.301 kb on + strand, within CA264_17725 at 4124.337 kb on + strand, within CA264_17725 at 4124.340 kb on + strand, within CA264_17725 at 4124.341 kb on - strand, within CA264_17725 at 4124.397 kb on - strand, within CA264_17725 at 4124.397 kb on - strand, within CA264_17725 at 4124.397 kb on - strand, within CA264_17725 at 4124.405 kb on + strand, within CA264_17725 at 4124.406 kb on - strand, within CA264_17725 at 4124.543 kb on + strand, within CA264_17725 at 4124.544 kb on - strand, within CA264_17725 at 4124.634 kb on - strand, within CA264_17725 at 4124.671 kb on + strand at 4124.672 kb on - strand at 4124.673 kb on + strand at 4124.674 kb on - strand at 4124.702 kb on + strand at 4124.702 kb on + strand at 4124.703 kb on - strand at 4124.708 kb on - strand at 4124.734 kb on - strand at 4124.739 kb on + strand at 4124.740 kb on - strand at 4124.740 kb on - strand at 4124.740 kb on - strand at 4124.740 kb on - strand at 4124.743 kb on + strand at 4124.744 kb on - strand at 4124.751 kb on + strand at 4124.751 kb on + strand at 4124.778 kb on + strand at 4124.786 kb on - strand at 4124.808 kb on + strand at 4124.863 kb on + strand at 4124.863 kb on + strand at 4124.864 kb on - strand at 4124.864 kb on - strand at 4124.867 kb on + strand at 4124.930 kb on + strand, within CA264_17730 at 4124.964 kb on + strand, within CA264_17730 at 4124.964 kb on + strand, within CA264_17730 at 4124.964 kb on + strand, within CA264_17730 at 4124.965 kb on - strand, within CA264_17730 at 4125.006 kb on + strand, within CA264_17730 at 4125.118 kb on + strand, within CA264_17730 at 4125.136 kb on + strand, within CA264_17730 at 4125.136 kb on + strand, within CA264_17730 at 4125.137 kb on - strand, within CA264_17730 at 4125.140 kb on + strand, within CA264_17730 at 4125.140 kb on + strand, within CA264_17730 at 4125.141 kb on - strand, within CA264_17730 at 4125.158 kb on + strand, within CA264_17730 at 4125.159 kb on - strand, within CA264_17730 at 4125.159 kb on - strand, within CA264_17730 at 4125.170 kb on - strand, within CA264_17730 at 4125.179 kb on - strand, within CA264_17730 at 4125.187 kb on + strand, within CA264_17730 at 4125.196 kb on + strand, within CA264_17730 at 4125.232 kb on - strand, within CA264_17730 at 4125.279 kb on + strand, within CA264_17730 at 4125.280 kb on - strand, within CA264_17730 at 4125.280 kb on - strand, within CA264_17730 at 4125.281 kb on + strand, within CA264_17730 at 4125.281 kb on + strand, within CA264_17730 at 4125.282 kb on - strand, within CA264_17730 at 4125.282 kb on - strand, within CA264_17730 at 4125.337 kb on - strand, within CA264_17730 at 4125.378 kb on + strand, within CA264_17730 at 4125.378 kb on + strand, within CA264_17730 at 4125.379 kb on - strand, within CA264_17730 at 4125.391 kb on + strand, within CA264_17730 at 4125.391 kb on + strand, within CA264_17730 at 4125.391 kb on + strand, within CA264_17730 at 4125.394 kb on + strand, within CA264_17730 at 4125.395 kb on - strand, within CA264_17730 at 4125.450 kb on + strand, within CA264_17730 at 4125.451 kb on - strand, within CA264_17730 at 4125.452 kb on + strand, within CA264_17730 at 4125.452 kb on + strand, within CA264_17730 at 4125.468 kb on - strand, within CA264_17730 at 4125.695 kb on + strand, within CA264_17730 at 4125.696 kb on - strand, within CA264_17730 at 4125.698 kb on + strand, within CA264_17730 at 4125.699 kb on - strand, within CA264_17730 at 4125.736 kb on + strand, within CA264_17730 at 4125.849 kb on + strand, within CA264_17730 at 4125.949 kb on + strand at 4125.949 kb on + strand at 4125.950 kb on - strand at 4125.950 kb on - strand at 4125.950 kb on - strand at 4125.955 kb on - strand at 4125.972 kb on + strand at 4125.973 kb on - strand at 4126.001 kb on - strand at 4126.054 kb on + strand at 4126.055 kb on - strand at 4126.055 kb on - strand at 4126.056 kb on + strand at 4126.057 kb on - strand at 4126.060 kb on + strand at 4126.070 kb on + strand at 4126.071 kb on - strand at 4126.086 kb on - strand at 4126.089 kb on + strand at 4126.089 kb on + strand at 4126.089 kb on + strand at 4126.089 kb on + strand at 4126.090 kb on - strand at 4126.090 kb on - strand at 4126.090 kb on - strand at 4126.119 kb on + strand at 4126.120 kb on - strand at 4126.150 kb on + strand at 4126.150 kb on + strand at 4126.151 kb on - strand at 4126.179 kb on + strand at 4126.179 kb on + strand at 4126.182 kb on - strand at 4126.182 kb on - strand at 4126.194 kb on + strand at 4126.242 kb on - strand at 4126.427 kb on - strand at 4126.431 kb on - strand at 4126.493 kb on + strand at 4126.494 kb on - strand at 4126.494 kb on - strand at 4126.619 kb on + strand at 4126.619 kb on + strand at 4126.619 kb on + strand at 4126.620 kb on - strand at 4126.623 kb on + strand at 4126.678 kb on + strand at 4126.678 kb on + strand at 4126.679 kb on - strand at 4126.682 kb on - strand at 4126.709 kb on + strand at 4126.709 kb on + strand at 4126.709 kb on + strand at 4126.710 kb on - strand at 4126.710 kb on - strand at 4126.758 kb on + strand at 4126.765 kb on - strand at 4126.780 kb on + strand at 4126.780 kb on + strand at 4126.781 kb on - strand at 4126.791 kb on - strand at 4126.820 kb on + strand at 4126.820 kb on + strand at 4126.821 kb on - strand at 4126.833 kb on + strand at 4126.864 kb on - strand at 4126.869 kb on + strand at 4126.876 kb on - strand at 4126.880 kb on + strand at 4126.928 kb on - strand at 4127.009 kb on - strand at 4127.015 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 4,123,765 + +0.4 4,123,804 + +0.7 4,123,810 - -0.4 4,123,820 - +0.4 4,123,821 + -1.2 4,123,822 - +1.2 4,123,822 - +0.3 4,123,822 - +0.6 4,123,960 - -0.5 4,123,990 + +0.0 4,124,071 + CA264_17725 0.13 -0.3 4,124,075 + CA264_17725 0.14 -1.0 4,124,080 + CA264_17725 0.14 -0.6 4,124,080 + CA264_17725 0.14 +0.1 4,124,124 - CA264_17725 0.20 +0.3 4,124,192 - CA264_17725 0.29 -0.8 4,124,244 + CA264_17725 0.36 -0.8 4,124,245 - CA264_17725 0.36 -0.1 4,124,301 + CA264_17725 0.44 -0.6 4,124,337 + CA264_17725 0.49 -0.4 4,124,340 + CA264_17725 0.49 -1.0 4,124,341 - CA264_17725 0.49 -0.7 4,124,397 - CA264_17725 0.57 +0.2 4,124,397 - CA264_17725 0.57 -0.3 4,124,397 - CA264_17725 0.57 +0.5 4,124,405 + CA264_17725 0.58 +0.6 4,124,406 - CA264_17725 0.58 -1.0 4,124,543 + CA264_17725 0.76 -0.6 4,124,544 - CA264_17725 0.76 -0.4 4,124,634 - CA264_17725 0.88 +1.0 4,124,671 + +1.4 4,124,672 - -0.1 4,124,673 + -0.2 4,124,674 - -0.0 4,124,702 + -0.7 4,124,702 + -0.4 4,124,703 - -0.7 4,124,708 - +0.0 4,124,734 - +1.4 4,124,739 + -0.1 4,124,740 - +0.0 4,124,740 - +0.3 4,124,740 - -0.1 4,124,740 - +1.0 4,124,743 + +0.9 4,124,744 - -0.1 4,124,751 + -1.3 4,124,751 + +0.3 4,124,778 + -0.7 4,124,786 - +1.3 4,124,808 + -0.2 4,124,863 + +1.1 4,124,863 + +0.2 4,124,864 - -1.0 4,124,864 - +0.2 4,124,867 + -0.3 4,124,930 + CA264_17730 0.14 +1.9 4,124,964 + CA264_17730 0.17 -0.3 4,124,964 + CA264_17730 0.17 -0.2 4,124,964 + CA264_17730 0.17 -0.9 4,124,965 - CA264_17730 0.17 -0.3 4,125,006 + CA264_17730 0.20 +0.4 4,125,118 + CA264_17730 0.29 +0.6 4,125,136 + CA264_17730 0.30 -0.4 4,125,136 + CA264_17730 0.30 +0.3 4,125,137 - CA264_17730 0.30 -0.1 4,125,140 + CA264_17730 0.30 -0.5 4,125,140 + CA264_17730 0.30 -0.1 4,125,141 - CA264_17730 0.30 -0.4 4,125,158 + CA264_17730 0.32 -0.0 4,125,159 - CA264_17730 0.32 -0.1 4,125,159 - CA264_17730 0.32 -0.3 4,125,170 - CA264_17730 0.33 +0.6 4,125,179 - CA264_17730 0.33 -0.0 4,125,187 + CA264_17730 0.34 +1.3 4,125,196 + CA264_17730 0.35 +0.0 4,125,232 - CA264_17730 0.37 +0.9 4,125,279 + CA264_17730 0.41 -0.2 4,125,280 - CA264_17730 0.41 -0.2 4,125,280 - CA264_17730 0.41 -0.0 4,125,281 + CA264_17730 0.41 -0.2 4,125,281 + CA264_17730 0.41 +0.8 4,125,282 - CA264_17730 0.41 +0.4 4,125,282 - CA264_17730 0.41 -0.7 4,125,337 - CA264_17730 0.45 -0.1 4,125,378 + CA264_17730 0.48 -1.0 4,125,378 + CA264_17730 0.48 +0.6 4,125,379 - CA264_17730 0.49 -0.7 4,125,391 + CA264_17730 0.49 +0.2 4,125,391 + CA264_17730 0.49 -0.2 4,125,391 + CA264_17730 0.49 +0.4 4,125,394 + CA264_17730 0.50 -0.3 4,125,395 - CA264_17730 0.50 +0.5 4,125,450 + CA264_17730 0.54 -0.2 4,125,451 - CA264_17730 0.54 -0.0 4,125,452 + CA264_17730 0.54 +0.4 4,125,452 + CA264_17730 0.54 -0.4 4,125,468 - CA264_17730 0.55 +0.5 4,125,695 + CA264_17730 0.73 +0.1 4,125,696 - CA264_17730 0.73 -0.8 4,125,698 + CA264_17730 0.73 +0.3 4,125,699 - CA264_17730 0.73 +0.5 4,125,736 + CA264_17730 0.76 -0.8 4,125,849 + CA264_17730 0.84 -0.1 4,125,949 + +0.0 4,125,949 + -0.5 4,125,950 - +0.3 4,125,950 - +0.5 4,125,950 - -0.1 4,125,955 - -0.8 4,125,972 + -0.5 4,125,973 - -0.0 4,126,001 - +0.7 4,126,054 + +0.1 4,126,055 - +0.4 4,126,055 - +0.4 4,126,056 + -1.6 4,126,057 - +0.0 4,126,060 + +0.9 4,126,070 + +0.2 4,126,071 - +0.0 4,126,086 - +1.0 4,126,089 + -0.9 4,126,089 + +0.3 4,126,089 + -1.1 4,126,089 + -0.0 4,126,090 - +0.3 4,126,090 - -0.1 4,126,090 - -0.2 4,126,119 + -0.3 4,126,120 - +0.6 4,126,150 + -0.5 4,126,150 + +0.3 4,126,151 - -0.0 4,126,179 + -0.2 4,126,179 + +0.1 4,126,182 - -0.4 4,126,182 - -0.3 4,126,194 + -0.5 4,126,242 - -0.5 4,126,427 - -0.5 4,126,431 - -0.2 4,126,493 + -1.0 4,126,494 - -0.1 4,126,494 - -0.9 4,126,619 + -0.8 4,126,619 + -1.1 4,126,619 + +0.5 4,126,620 - -1.2 4,126,623 + -0.7 4,126,678 + -0.8 4,126,678 + -0.8 4,126,679 - -0.5 4,126,682 - -0.8 4,126,709 + -0.7 4,126,709 + -0.6 4,126,709 + +0.2 4,126,710 - +0.1 4,126,710 - -0.9 4,126,758 + -1.2 4,126,765 - -0.2 4,126,780 + -0.1 4,126,780 + +0.1 4,126,781 - -0.4 4,126,791 - -0.5 4,126,820 + -0.6 4,126,820 + +0.2 4,126,821 - -0.3 4,126,833 + -0.7 4,126,864 - -1.5 4,126,869 + -1.0 4,126,876 - -0.4 4,126,880 + -1.0 4,126,928 - -1.1 4,127,009 - -0.8 4,127,015 + -3.6
Or see this region's nucleotide sequence