Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17460 and CA264_17465 are separated by 273 nucleotides CA264_17465 and CA264_17470 are separated by 104 nucleotides CA264_17470 and CA264_17475 are separated by 33 nucleotides
CA264_17460: CA264_17460 - hypothetical protein, at 4,069,460 to 4,070,974
_17460
CA264_17465: CA264_17465 - hypothetical protein, at 4,071,248 to 4,071,571
_17465
CA264_17470: CA264_17470 - hypothetical protein, at 4,071,676 to 4,072,308
_17470
CA264_17475: CA264_17475 - DNA replication and repair protein RecF, at 4,072,342 to 4,073,454
_17475
Position (kb)
4071
4072
4073 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4070.769 kb on + strand, within CA264_17460 at 4070.774 kb on - strand, within CA264_17460 at 4070.774 kb on - strand, within CA264_17460 at 4070.846 kb on - strand at 4070.922 kb on + strand at 4070.957 kb on - strand at 4070.957 kb on - strand at 4070.961 kb on - strand at 4071.017 kb on + strand at 4071.018 kb on - strand at 4071.018 kb on - strand at 4071.027 kb on + strand at 4071.027 kb on + strand at 4071.142 kb on + strand at 4071.184 kb on - strand at 4071.184 kb on - strand at 4071.196 kb on + strand at 4071.197 kb on - strand at 4071.585 kb on - strand at 4071.585 kb on - strand at 4071.617 kb on + strand at 4071.619 kb on + strand at 4071.641 kb on - strand at 4071.645 kb on + strand at 4071.645 kb on + strand at 4071.645 kb on + strand at 4071.645 kb on + strand at 4071.646 kb on - strand at 4071.650 kb on + strand at 4071.650 kb on + strand at 4071.650 kb on + strand at 4071.650 kb on + strand at 4071.650 kb on + strand at 4071.651 kb on - strand at 4071.651 kb on - strand at 4071.651 kb on - strand at 4071.651 kb on - strand at 4071.714 kb on + strand at 4071.714 kb on + strand at 4071.715 kb on - strand at 4071.727 kb on + strand at 4071.727 kb on + strand at 4071.727 kb on + strand at 4071.735 kb on + strand at 4071.751 kb on + strand, within CA264_17470 at 4071.751 kb on + strand, within CA264_17470 at 4071.752 kb on - strand, within CA264_17470 at 4071.818 kb on - strand, within CA264_17470 at 4071.820 kb on - strand, within CA264_17470 at 4071.820 kb on - strand, within CA264_17470 at 4071.820 kb on - strand, within CA264_17470 at 4071.862 kb on - strand, within CA264_17470 at 4071.874 kb on + strand, within CA264_17470 at 4071.874 kb on + strand, within CA264_17470 at 4071.875 kb on - strand, within CA264_17470 at 4071.875 kb on - strand, within CA264_17470 at 4071.880 kb on + strand, within CA264_17470 at 4071.902 kb on + strand, within CA264_17470 at 4071.931 kb on - strand, within CA264_17470 at 4071.944 kb on - strand, within CA264_17470 at 4071.944 kb on - strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.954 kb on + strand, within CA264_17470 at 4071.955 kb on - strand, within CA264_17470 at 4071.955 kb on - strand, within CA264_17470 at 4071.955 kb on - strand, within CA264_17470 at 4071.955 kb on - strand, within CA264_17470 at 4071.955 kb on - strand, within CA264_17470 at 4071.993 kb on + strand, within CA264_17470 at 4071.993 kb on + strand, within CA264_17470 at 4071.994 kb on - strand, within CA264_17470 at 4072.009 kb on + strand, within CA264_17470 at 4072.039 kb on - strand, within CA264_17470 at 4072.042 kb on + strand, within CA264_17470 at 4072.043 kb on - strand, within CA264_17470 at 4072.043 kb on - strand, within CA264_17470 at 4072.043 kb on - strand, within CA264_17470 at 4072.065 kb on + strand, within CA264_17470 at 4072.066 kb on - strand, within CA264_17470 at 4072.090 kb on + strand, within CA264_17470 at 4072.090 kb on + strand, within CA264_17470 at 4072.091 kb on - strand, within CA264_17470 at 4072.147 kb on + strand, within CA264_17470 at 4072.147 kb on + strand, within CA264_17470 at 4072.147 kb on + strand, within CA264_17470 at 4072.147 kb on + strand, within CA264_17470 at 4072.148 kb on - strand, within CA264_17470 at 4072.148 kb on - strand, within CA264_17470 at 4072.149 kb on + strand, within CA264_17470 at 4072.150 kb on - strand, within CA264_17470 at 4072.156 kb on + strand, within CA264_17470 at 4072.186 kb on + strand, within CA264_17470 at 4072.199 kb on + strand, within CA264_17470 at 4072.203 kb on + strand, within CA264_17470 at 4072.204 kb on - strand, within CA264_17470 at 4072.204 kb on - strand, within CA264_17470 at 4072.262 kb on - strand at 4072.270 kb on + strand at 4072.270 kb on + strand at 4072.344 kb on - strand at 4072.396 kb on - strand at 4072.577 kb on - strand, within CA264_17475 at 4072.610 kb on + strand, within CA264_17475 at 4072.778 kb on + strand, within CA264_17475 at 4072.789 kb on + strand, within CA264_17475 at 4072.820 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.989 kb on - strand, within CA264_17475 at 4073.201 kb on - strand, within CA264_17475
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 4,070,769 + CA264_17460 0.86 -0.3 4,070,774 - CA264_17460 0.87 -0.3 4,070,774 - CA264_17460 0.87 -0.2 4,070,846 - -0.7 4,070,922 + -1.2 4,070,957 - +0.0 4,070,957 - -0.6 4,070,961 - +0.4 4,071,017 + +0.5 4,071,018 - +0.3 4,071,018 - -0.2 4,071,027 + -0.1 4,071,027 + -0.3 4,071,142 + +0.0 4,071,184 - -0.7 4,071,184 - -0.4 4,071,196 + -0.0 4,071,197 - +0.4 4,071,585 - +1.2 4,071,585 - -0.4 4,071,617 + -2.3 4,071,619 + +0.7 4,071,641 - +0.5 4,071,645 + -0.1 4,071,645 + -1.0 4,071,645 + +0.2 4,071,645 + +0.7 4,071,646 - -0.0 4,071,650 + -0.3 4,071,650 + +0.3 4,071,650 + -0.6 4,071,650 + -0.0 4,071,650 + +0.4 4,071,651 - +0.2 4,071,651 - +0.0 4,071,651 - +0.1 4,071,651 - -0.5 4,071,714 + +0.2 4,071,714 + -0.7 4,071,715 - -1.2 4,071,727 + +0.6 4,071,727 + -0.6 4,071,727 + +0.2 4,071,735 + +0.6 4,071,751 + CA264_17470 0.12 +0.3 4,071,751 + CA264_17470 0.12 +0.2 4,071,752 - CA264_17470 0.12 -0.9 4,071,818 - CA264_17470 0.22 +0.6 4,071,820 - CA264_17470 0.23 -0.2 4,071,820 - CA264_17470 0.23 +0.0 4,071,820 - CA264_17470 0.23 +0.6 4,071,862 - CA264_17470 0.29 +0.7 4,071,874 + CA264_17470 0.31 -0.5 4,071,874 + CA264_17470 0.31 +0.9 4,071,875 - CA264_17470 0.31 -1.1 4,071,875 - CA264_17470 0.31 +1.4 4,071,880 + CA264_17470 0.32 +2.4 4,071,902 + CA264_17470 0.36 +0.9 4,071,931 - CA264_17470 0.40 +0.3 4,071,944 - CA264_17470 0.42 +0.3 4,071,944 - CA264_17470 0.42 +0.3 4,071,954 + CA264_17470 0.44 -1.0 4,071,954 + CA264_17470 0.44 -0.7 4,071,954 + CA264_17470 0.44 -0.4 4,071,954 + CA264_17470 0.44 +0.3 4,071,954 + CA264_17470 0.44 +0.1 4,071,954 + CA264_17470 0.44 -0.1 4,071,954 + CA264_17470 0.44 +0.2 4,071,955 - CA264_17470 0.44 +0.3 4,071,955 - CA264_17470 0.44 +0.7 4,071,955 - CA264_17470 0.44 +0.8 4,071,955 - CA264_17470 0.44 +2.6 4,071,955 - CA264_17470 0.44 +0.6 4,071,993 + CA264_17470 0.50 -0.1 4,071,993 + CA264_17470 0.50 +0.9 4,071,994 - CA264_17470 0.50 +0.9 4,072,009 + CA264_17470 0.53 -0.2 4,072,039 - CA264_17470 0.57 +0.4 4,072,042 + CA264_17470 0.58 +1.2 4,072,043 - CA264_17470 0.58 +0.4 4,072,043 - CA264_17470 0.58 -0.2 4,072,043 - CA264_17470 0.58 -1.1 4,072,065 + CA264_17470 0.61 +0.8 4,072,066 - CA264_17470 0.62 -0.1 4,072,090 + CA264_17470 0.65 +0.2 4,072,090 + CA264_17470 0.65 -0.2 4,072,091 - CA264_17470 0.66 -0.7 4,072,147 + CA264_17470 0.74 +0.5 4,072,147 + CA264_17470 0.74 +0.5 4,072,147 + CA264_17470 0.74 -0.3 4,072,147 + CA264_17470 0.74 -0.3 4,072,148 - CA264_17470 0.75 -0.7 4,072,148 - CA264_17470 0.75 +0.2 4,072,149 + CA264_17470 0.75 +0.6 4,072,150 - CA264_17470 0.75 -0.3 4,072,156 + CA264_17470 0.76 -0.5 4,072,186 + CA264_17470 0.81 -0.5 4,072,199 + CA264_17470 0.83 -0.8 4,072,203 + CA264_17470 0.83 +0.0 4,072,204 - CA264_17470 0.83 -0.2 4,072,204 - CA264_17470 0.83 +0.1 4,072,262 - -0.3 4,072,270 + -0.8 4,072,270 + -0.1 4,072,344 - -0.3 4,072,396 - -0.5 4,072,577 - CA264_17475 0.21 -1.4 4,072,610 + CA264_17475 0.24 +0.5 4,072,778 + CA264_17475 0.39 +0.2 4,072,789 + CA264_17475 0.40 -1.3 4,072,820 + CA264_17475 0.43 -0.0 4,072,988 + CA264_17475 0.58 +0.3 4,072,988 + CA264_17475 0.58 -0.5 4,072,988 + CA264_17475 0.58 -1.0 4,072,989 - CA264_17475 0.58 +0.6 4,073,201 - CA264_17475 0.77 +1.2
Or see this region's nucleotide sequence