Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17315 and CA264_17320 are separated by 876 nucleotides CA264_17320 and CA264_17325 overlap by 23 nucleotides
CA264_17315: CA264_17315 - glycine--tRNA ligase, at 4,031,427 to 4,032,929
_17315
CA264_17320: CA264_17320 - hypothetical protein, at 4,033,806 to 4,036,313
_17320
CA264_17325: CA264_17325 - isoleucine--tRNA ligase, at 4,036,291 to 4,039,644
_17325
Position (kb)
4033
4034
4035
4036
4037 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4032.928 kb on - strand at 4032.932 kb on - strand at 4032.934 kb on - strand at 4032.937 kb on + strand at 4032.939 kb on + strand at 4032.954 kb on + strand at 4032.954 kb on + strand at 4033.101 kb on + strand at 4033.121 kb on + strand at 4033.163 kb on - strand at 4033.165 kb on + strand at 4033.172 kb on - strand at 4033.175 kb on + strand at 4033.268 kb on + strand at 4033.269 kb on - strand at 4033.269 kb on - strand at 4033.312 kb on - strand at 4033.334 kb on + strand at 4033.334 kb on + strand at 4033.348 kb on - strand at 4033.380 kb on - strand at 4033.380 kb on - strand at 4033.380 kb on - strand at 4033.456 kb on + strand at 4033.460 kb on + strand at 4033.545 kb on - strand at 4033.639 kb on + strand at 4033.734 kb on + strand at 4033.734 kb on + strand at 4033.735 kb on - strand at 4033.735 kb on - strand at 4033.757 kb on + strand at 4033.758 kb on - strand at 4033.814 kb on + strand at 4033.841 kb on + strand at 4033.883 kb on + strand at 4033.891 kb on - strand at 4033.891 kb on - strand at 4033.906 kb on + strand at 4033.907 kb on - strand at 4033.977 kb on - strand at 4034.038 kb on - strand at 4034.055 kb on - strand at 4034.055 kb on - strand at 4034.092 kb on + strand, within CA264_17320 at 4034.093 kb on - strand, within CA264_17320 at 4034.093 kb on - strand, within CA264_17320 at 4034.102 kb on - strand, within CA264_17320 at 4034.110 kb on + strand, within CA264_17320 at 4034.111 kb on - strand, within CA264_17320 at 4034.166 kb on - strand, within CA264_17320 at 4034.306 kb on - strand, within CA264_17320 at 4034.354 kb on + strand, within CA264_17320 at 4034.354 kb on + strand, within CA264_17320 at 4034.355 kb on - strand, within CA264_17320 at 4034.356 kb on + strand, within CA264_17320 at 4034.357 kb on - strand, within CA264_17320 at 4034.395 kb on + strand, within CA264_17320 at 4034.449 kb on + strand, within CA264_17320 at 4034.501 kb on + strand, within CA264_17320 at 4034.502 kb on - strand, within CA264_17320 at 4034.611 kb on + strand, within CA264_17320 at 4034.629 kb on + strand, within CA264_17320 at 4034.630 kb on - strand, within CA264_17320 at 4034.632 kb on + strand, within CA264_17320 at 4034.633 kb on - strand, within CA264_17320 at 4034.633 kb on - strand, within CA264_17320 at 4034.639 kb on + strand, within CA264_17320 at 4034.640 kb on - strand, within CA264_17320 at 4034.640 kb on - strand, within CA264_17320 at 4034.640 kb on - strand, within CA264_17320 at 4034.673 kb on + strand, within CA264_17320 at 4034.673 kb on + strand, within CA264_17320 at 4034.673 kb on + strand, within CA264_17320 at 4034.673 kb on + strand, within CA264_17320 at 4034.674 kb on - strand, within CA264_17320 at 4034.674 kb on - strand, within CA264_17320 at 4034.674 kb on - strand, within CA264_17320 at 4034.674 kb on - strand, within CA264_17320 at 4034.677 kb on + strand, within CA264_17320 at 4034.677 kb on + strand, within CA264_17320 at 4034.717 kb on + strand, within CA264_17320 at 4034.718 kb on - strand, within CA264_17320 at 4034.743 kb on + strand, within CA264_17320 at 4034.780 kb on + strand, within CA264_17320 at 4034.781 kb on - strand, within CA264_17320 at 4034.807 kb on + strand, within CA264_17320 at 4034.807 kb on + strand, within CA264_17320 at 4034.808 kb on - strand, within CA264_17320 at 4034.819 kb on + strand, within CA264_17320 at 4034.827 kb on + strand, within CA264_17320 at 4034.827 kb on + strand, within CA264_17320 at 4034.828 kb on - strand, within CA264_17320 at 4034.832 kb on + strand, within CA264_17320 at 4034.833 kb on - strand, within CA264_17320 at 4034.877 kb on - strand, within CA264_17320 at 4034.880 kb on - strand, within CA264_17320 at 4034.880 kb on - strand, within CA264_17320 at 4034.881 kb on + strand, within CA264_17320 at 4034.882 kb on - strand, within CA264_17320 at 4034.882 kb on - strand, within CA264_17320 at 4034.882 kb on - strand, within CA264_17320 at 4035.021 kb on + strand, within CA264_17320 at 4035.021 kb on + strand, within CA264_17320 at 4035.039 kb on - strand, within CA264_17320 at 4035.041 kb on - strand, within CA264_17320 at 4035.066 kb on + strand, within CA264_17320 at 4035.066 kb on + strand, within CA264_17320 at 4035.067 kb on - strand, within CA264_17320 at 4035.087 kb on + strand, within CA264_17320 at 4035.087 kb on + strand, within CA264_17320 at 4035.088 kb on - strand, within CA264_17320 at 4035.088 kb on - strand, within CA264_17320 at 4035.088 kb on - strand, within CA264_17320 at 4035.088 kb on - strand, within CA264_17320 at 4035.272 kb on - strand, within CA264_17320 at 4035.285 kb on - strand, within CA264_17320 at 4035.365 kb on + strand, within CA264_17320 at 4035.394 kb on + strand, within CA264_17320 at 4035.395 kb on - strand, within CA264_17320 at 4035.476 kb on - strand, within CA264_17320 at 4035.490 kb on + strand, within CA264_17320 at 4035.491 kb on - strand, within CA264_17320 at 4035.491 kb on - strand, within CA264_17320 at 4035.530 kb on + strand, within CA264_17320 at 4035.590 kb on + strand, within CA264_17320 at 4035.701 kb on + strand, within CA264_17320 at 4035.727 kb on + strand, within CA264_17320 at 4035.752 kb on + strand, within CA264_17320 at 4035.753 kb on - strand, within CA264_17320 at 4035.767 kb on - strand, within CA264_17320 at 4035.797 kb on - strand, within CA264_17320 at 4035.807 kb on - strand, within CA264_17320 at 4035.854 kb on + strand, within CA264_17320 at 4035.854 kb on + strand, within CA264_17320 at 4035.863 kb on - strand, within CA264_17320 at 4035.874 kb on + strand, within CA264_17320 at 4035.874 kb on + strand, within CA264_17320 at 4035.874 kb on + strand, within CA264_17320 at 4035.875 kb on - strand, within CA264_17320 at 4035.921 kb on + strand, within CA264_17320 at 4035.923 kb on + strand, within CA264_17320 at 4035.923 kb on + strand, within CA264_17320 at 4035.924 kb on - strand, within CA264_17320 at 4035.924 kb on - strand, within CA264_17320 at 4036.012 kb on - strand, within CA264_17320 at 4036.081 kb on + strand at 4036.082 kb on - strand at 4036.136 kb on + strand at 4036.136 kb on + strand at 4036.137 kb on - strand at 4036.137 kb on - strand at 4036.167 kb on + strand at 4036.167 kb on + strand at 4036.167 kb on + strand at 4036.171 kb on + strand at 4036.171 kb on + strand at 4036.171 kb on + strand at 4036.172 kb on - strand at 4036.172 kb on - strand at 4036.172 kb on - strand at 4036.172 kb on - strand at 4036.264 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 4,032,928 - -1.0 4,032,932 - +1.4 4,032,934 - -0.3 4,032,937 + -0.6 4,032,939 + +0.6 4,032,954 + +1.7 4,032,954 + -0.0 4,033,101 + +0.6 4,033,121 + -0.0 4,033,163 - -0.1 4,033,165 + +0.2 4,033,172 - -0.7 4,033,175 + -0.1 4,033,268 + +1.6 4,033,269 - -0.0 4,033,269 - +1.0 4,033,312 - -1.9 4,033,334 + +0.0 4,033,334 + -0.8 4,033,348 - +0.2 4,033,380 - +0.0 4,033,380 - +0.8 4,033,380 - -0.5 4,033,456 + -0.8 4,033,460 + +0.6 4,033,545 - +0.1 4,033,639 + -0.0 4,033,734 + +0.2 4,033,734 + +1.3 4,033,735 - +0.6 4,033,735 - +0.3 4,033,757 + +0.6 4,033,758 - -2.0 4,033,814 + -0.3 4,033,841 + -0.1 4,033,883 + -1.1 4,033,891 - -0.5 4,033,891 - +1.2 4,033,906 + -0.5 4,033,907 - +0.3 4,033,977 - -1.8 4,034,038 - -0.6 4,034,055 - +0.5 4,034,055 - -1.7 4,034,092 + CA264_17320 0.11 +1.3 4,034,093 - CA264_17320 0.11 -0.0 4,034,093 - CA264_17320 0.11 +0.9 4,034,102 - CA264_17320 0.12 -0.4 4,034,110 + CA264_17320 0.12 -0.1 4,034,111 - CA264_17320 0.12 -0.2 4,034,166 - CA264_17320 0.14 -0.5 4,034,306 - CA264_17320 0.20 -0.2 4,034,354 + CA264_17320 0.22 +0.1 4,034,354 + CA264_17320 0.22 -0.1 4,034,355 - CA264_17320 0.22 -0.4 4,034,356 + CA264_17320 0.22 +0.3 4,034,357 - CA264_17320 0.22 -0.0 4,034,395 + CA264_17320 0.23 +0.3 4,034,449 + CA264_17320 0.26 -0.3 4,034,501 + CA264_17320 0.28 +2.5 4,034,502 - CA264_17320 0.28 -0.4 4,034,611 + CA264_17320 0.32 +0.2 4,034,629 + CA264_17320 0.33 +0.2 4,034,630 - CA264_17320 0.33 -0.2 4,034,632 + CA264_17320 0.33 -0.5 4,034,633 - CA264_17320 0.33 +1.9 4,034,633 - CA264_17320 0.33 +0.5 4,034,639 + CA264_17320 0.33 +0.0 4,034,640 - CA264_17320 0.33 -1.2 4,034,640 - CA264_17320 0.33 +0.3 4,034,640 - CA264_17320 0.33 +0.4 4,034,673 + CA264_17320 0.35 -1.0 4,034,673 + CA264_17320 0.35 +0.6 4,034,673 + CA264_17320 0.35 -1.1 4,034,673 + CA264_17320 0.35 +0.2 4,034,674 - CA264_17320 0.35 +0.4 4,034,674 - CA264_17320 0.35 +0.1 4,034,674 - CA264_17320 0.35 +0.1 4,034,674 - CA264_17320 0.35 -1.1 4,034,677 + CA264_17320 0.35 +1.6 4,034,677 + CA264_17320 0.35 +0.4 4,034,717 + CA264_17320 0.36 +0.7 4,034,718 - CA264_17320 0.36 +0.0 4,034,743 + CA264_17320 0.37 -0.4 4,034,780 + CA264_17320 0.39 +0.5 4,034,781 - CA264_17320 0.39 -0.1 4,034,807 + CA264_17320 0.40 +0.4 4,034,807 + CA264_17320 0.40 +0.3 4,034,808 - CA264_17320 0.40 -0.2 4,034,819 + CA264_17320 0.40 +1.2 4,034,827 + CA264_17320 0.41 -0.4 4,034,827 + CA264_17320 0.41 +0.2 4,034,828 - CA264_17320 0.41 +0.5 4,034,832 + CA264_17320 0.41 -0.3 4,034,833 - CA264_17320 0.41 +0.1 4,034,877 - CA264_17320 0.43 -1.3 4,034,880 - CA264_17320 0.43 -1.0 4,034,880 - CA264_17320 0.43 +0.2 4,034,881 + CA264_17320 0.43 -0.0 4,034,882 - CA264_17320 0.43 -0.4 4,034,882 - CA264_17320 0.43 +0.3 4,034,882 - CA264_17320 0.43 +0.2 4,035,021 + CA264_17320 0.48 +0.1 4,035,021 + CA264_17320 0.48 -0.3 4,035,039 - CA264_17320 0.49 -0.4 4,035,041 - CA264_17320 0.49 -0.4 4,035,066 + CA264_17320 0.50 -0.2 4,035,066 + CA264_17320 0.50 +0.0 4,035,067 - CA264_17320 0.50 -1.1 4,035,087 + CA264_17320 0.51 -0.8 4,035,087 + CA264_17320 0.51 -0.9 4,035,088 - CA264_17320 0.51 -0.2 4,035,088 - CA264_17320 0.51 +0.6 4,035,088 - CA264_17320 0.51 -0.7 4,035,088 - CA264_17320 0.51 +0.2 4,035,272 - CA264_17320 0.58 +0.7 4,035,285 - CA264_17320 0.59 -1.0 4,035,365 + CA264_17320 0.62 -0.1 4,035,394 + CA264_17320 0.63 -0.1 4,035,395 - CA264_17320 0.63 +1.1 4,035,476 - CA264_17320 0.67 +0.3 4,035,490 + CA264_17320 0.67 +0.2 4,035,491 - CA264_17320 0.67 +1.0 4,035,491 - CA264_17320 0.67 -0.1 4,035,530 + CA264_17320 0.69 -0.8 4,035,590 + CA264_17320 0.71 +0.7 4,035,701 + CA264_17320 0.76 +1.7 4,035,727 + CA264_17320 0.77 +0.7 4,035,752 + CA264_17320 0.78 -0.1 4,035,753 - CA264_17320 0.78 -2.1 4,035,767 - CA264_17320 0.78 -0.2 4,035,797 - CA264_17320 0.79 +0.3 4,035,807 - CA264_17320 0.80 +0.9 4,035,854 + CA264_17320 0.82 -0.1 4,035,854 + CA264_17320 0.82 +0.9 4,035,863 - CA264_17320 0.82 +0.5 4,035,874 + CA264_17320 0.82 -0.9 4,035,874 + CA264_17320 0.82 -0.6 4,035,874 + CA264_17320 0.82 -0.4 4,035,875 - CA264_17320 0.82 +1.1 4,035,921 + CA264_17320 0.84 -2.2 4,035,923 + CA264_17320 0.84 +0.2 4,035,923 + CA264_17320 0.84 -2.0 4,035,924 - CA264_17320 0.84 +0.1 4,035,924 - CA264_17320 0.84 +0.3 4,036,012 - CA264_17320 0.88 +0.8 4,036,081 + -1.2 4,036,082 - +0.6 4,036,136 + +0.6 4,036,136 + +0.3 4,036,137 - +0.3 4,036,137 - -2.7 4,036,167 + +0.6 4,036,167 + +0.4 4,036,167 + -0.3 4,036,171 + +0.4 4,036,171 + +0.3 4,036,171 + -0.1 4,036,172 - -0.2 4,036,172 - -0.0 4,036,172 - +1.3 4,036,172 - +0.1 4,036,264 + +0.4
Or see this region's nucleotide sequence