Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17075 and CA264_17080 are separated by 127 nucleotides CA264_17080 and CA264_17085 are separated by 1 nucleotides CA264_17085 and CA264_17090 overlap by 4 nucleotides CA264_17090 and CA264_17095 are separated by 31 nucleotides
CA264_17075: CA264_17075 - pterin-4-alpha-carbinolamine dehydratase, at 3,975,937 to 3,976,191
_17075
CA264_17080: CA264_17080 - rRNA (cytidine-2'-O-)-methyltransferase, at 3,976,319 to 3,977,029
_17080
CA264_17085: CA264_17085 - hypothetical protein, at 3,977,031 to 3,978,263
_17085
CA264_17090: CA264_17090 - inositol monophosphatase, at 3,978,260 to 3,979,063
_17090
CA264_17095: CA264_17095 - FeoB-associated Cys-rich membrane protein, at 3,979,095 to 3,979,274
_17095
Position (kb)
3977
3978
3979 Strain fitness (log2 ratio)
-2
-1
0
1 at 3976.069 kb on + strand, within CA264_17075 at 3976.085 kb on + strand, within CA264_17075 at 3976.206 kb on + strand at 3976.235 kb on + strand at 3976.236 kb on - strand at 3976.314 kb on - strand at 3976.347 kb on - strand at 3976.390 kb on - strand, within CA264_17080 at 3976.409 kb on - strand, within CA264_17080 at 3976.423 kb on + strand, within CA264_17080 at 3976.424 kb on - strand, within CA264_17080 at 3976.425 kb on + strand, within CA264_17080 at 3976.980 kb on + strand at 3976.980 kb on + strand at 3977.040 kb on + strand at 3977.054 kb on - strand at 3978.195 kb on + strand at 3978.198 kb on - strand at 3978.203 kb on - strand at 3978.248 kb on - strand at 3978.248 kb on - strand at 3978.268 kb on - strand at 3978.294 kb on + strand at 3978.294 kb on + strand at 3978.295 kb on - strand at 3978.319 kb on + strand at 3978.322 kb on - strand at 3978.389 kb on + strand, within CA264_17090 at 3978.390 kb on - strand, within CA264_17090 at 3978.393 kb on + strand, within CA264_17090 at 3978.393 kb on + strand, within CA264_17090 at 3978.498 kb on - strand, within CA264_17090 at 3978.662 kb on + strand, within CA264_17090 at 3978.738 kb on - strand, within CA264_17090 at 3978.764 kb on + strand, within CA264_17090 at 3978.764 kb on + strand, within CA264_17090 at 3978.793 kb on + strand, within CA264_17090 at 3978.842 kb on + strand, within CA264_17090 at 3978.842 kb on + strand, within CA264_17090 at 3978.843 kb on - strand, within CA264_17090 at 3978.847 kb on - strand, within CA264_17090 at 3978.878 kb on + strand, within CA264_17090 at 3978.953 kb on - strand, within CA264_17090 at 3979.071 kb on - strand at 3979.088 kb on + strand at 3979.089 kb on - strand at 3979.094 kb on + strand at 3979.100 kb on - strand at 3979.115 kb on - strand, within CA264_17095 at 3979.115 kb on - strand, within CA264_17095
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 3,976,069 + CA264_17075 0.52 -2.6 3,976,085 + CA264_17075 0.58 -0.1 3,976,206 + +0.0 3,976,235 + -0.2 3,976,236 - +0.4 3,976,314 - -0.4 3,976,347 - -0.6 3,976,390 - CA264_17080 0.10 -1.1 3,976,409 - CA264_17080 0.13 +0.4 3,976,423 + CA264_17080 0.15 +0.1 3,976,424 - CA264_17080 0.15 +1.0 3,976,425 + CA264_17080 0.15 -0.8 3,976,980 + -1.0 3,976,980 + -1.1 3,977,040 + -1.1 3,977,054 - -0.7 3,978,195 + +0.5 3,978,198 - -0.4 3,978,203 - -1.3 3,978,248 - -0.7 3,978,248 - -0.7 3,978,268 - -0.3 3,978,294 + +0.3 3,978,294 + -0.2 3,978,295 - -1.3 3,978,319 + -0.2 3,978,322 - +0.5 3,978,389 + CA264_17090 0.16 +0.4 3,978,390 - CA264_17090 0.16 -0.3 3,978,393 + CA264_17090 0.17 +1.0 3,978,393 + CA264_17090 0.17 +0.8 3,978,498 - CA264_17090 0.30 -2.2 3,978,662 + CA264_17090 0.50 -0.7 3,978,738 - CA264_17090 0.59 +0.0 3,978,764 + CA264_17090 0.63 +0.8 3,978,764 + CA264_17090 0.63 -0.3 3,978,793 + CA264_17090 0.66 -1.6 3,978,842 + CA264_17090 0.72 -0.8 3,978,842 + CA264_17090 0.72 -1.0 3,978,843 - CA264_17090 0.73 -0.9 3,978,847 - CA264_17090 0.73 -0.7 3,978,878 + CA264_17090 0.77 -0.1 3,978,953 - CA264_17090 0.86 -1.4 3,979,071 - -0.1 3,979,088 + -0.6 3,979,089 - +0.5 3,979,094 + -0.8 3,979,100 - -0.0 3,979,115 - CA264_17095 0.11 +0.8 3,979,115 - CA264_17095 0.11 +1.5
Or see this region's nucleotide sequence