Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16765

Experiment: m.b. Cobalt chloride 0.3 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_16760 and CA264_16765 are separated by 208 nucleotidesCA264_16765 and CA264_16770 are separated by 203 nucleotidesCA264_16770 and CA264_16775 are separated by 254 nucleotides CA264_16760: CA264_16760 - hypothetical protein, at 3,907,393 to 3,909,216 _16760 CA264_16765: CA264_16765 - coproporphyrinogen III oxidase, at 3,909,425 to 3,910,552 _16765 CA264_16770: CA264_16770 - hypothetical protein, at 3,910,756 to 3,911,091 _16770 CA264_16775: CA264_16775 - metal-dependent hydrolase, at 3,911,346 to 3,912,116 _16775 Position (kb) 3909 3910 3911Strain fitness (log2 ratio) -2 -1 0 1at 3908.464 kb on + strand, within CA264_16760at 3908.464 kb on + strand, within CA264_16760at 3908.465 kb on - strand, within CA264_16760at 3908.465 kb on - strand, within CA264_16760at 3908.468 kb on + strand, within CA264_16760at 3908.469 kb on - strand, within CA264_16760at 3908.536 kb on + strand, within CA264_16760at 3908.547 kb on - strand, within CA264_16760at 3908.547 kb on - strand, within CA264_16760at 3908.598 kb on + strand, within CA264_16760at 3908.598 kb on + strand, within CA264_16760at 3908.599 kb on - strand, within CA264_16760at 3908.603 kb on + strand, within CA264_16760at 3908.603 kb on + strand, within CA264_16760at 3908.603 kb on + strand, within CA264_16760at 3908.603 kb on + strand, within CA264_16760at 3908.603 kb on + strand, within CA264_16760at 3908.604 kb on - strand, within CA264_16760at 3908.604 kb on - strand, within CA264_16760at 3908.604 kb on - strand, within CA264_16760at 3908.649 kb on + strand, within CA264_16760at 3908.659 kb on + strand, within CA264_16760at 3908.661 kb on + strand, within CA264_16760at 3908.662 kb on - strand, within CA264_16760at 3908.665 kb on + strand, within CA264_16760at 3908.740 kb on + strand, within CA264_16760at 3908.740 kb on + strand, within CA264_16760at 3908.741 kb on - strand, within CA264_16760at 3908.741 kb on - strand, within CA264_16760at 3908.744 kb on + strand, within CA264_16760at 3908.745 kb on - strand, within CA264_16760at 3908.745 kb on - strand, within CA264_16760at 3908.745 kb on - strand, within CA264_16760at 3908.898 kb on - strand, within CA264_16760at 3908.901 kb on + strand, within CA264_16760at 3908.901 kb on + strand, within CA264_16760at 3908.901 kb on + strand, within CA264_16760at 3908.902 kb on - strand, within CA264_16760at 3908.902 kb on - strand, within CA264_16760at 3908.902 kb on - strand, within CA264_16760at 3908.924 kb on + strand, within CA264_16760at 3908.925 kb on - strand, within CA264_16760at 3908.946 kb on - strand, within CA264_16760at 3909.212 kb on + strandat 3909.233 kb on + strandat 3909.234 kb on - strandat 3909.254 kb on + strandat 3909.254 kb on + strandat 3909.316 kb on + strandat 3909.382 kb on + strandat 3909.382 kb on + strandat 3909.383 kb on - strandat 3909.437 kb on + strandat 3909.590 kb on + strand, within CA264_16765at 3909.640 kb on - strand, within CA264_16765at 3909.669 kb on + strand, within CA264_16765at 3909.874 kb on + strand, within CA264_16765at 3909.875 kb on - strand, within CA264_16765at 3909.884 kb on - strand, within CA264_16765at 3910.043 kb on - strand, within CA264_16765at 3910.121 kb on + strand, within CA264_16765at 3910.194 kb on - strand, within CA264_16765at 3910.194 kb on - strand, within CA264_16765at 3910.194 kb on - strand, within CA264_16765at 3910.194 kb on - strand, within CA264_16765at 3910.203 kb on + strand, within CA264_16765at 3910.244 kb on + strand, within CA264_16765at 3910.245 kb on - strand, within CA264_16765at 3910.352 kb on - strand, within CA264_16765at 3910.352 kb on - strand, within CA264_16765at 3910.403 kb on + strand, within CA264_16765at 3910.410 kb on - strand, within CA264_16765at 3910.490 kb on + strandat 3910.551 kb on - strandat 3910.551 kb on - strandat 3910.562 kb on + strandat 3910.563 kb on - strandat 3910.563 kb on - strandat 3910.567 kb on - strandat 3910.568 kb on + strandat 3910.585 kb on - strandat 3910.601 kb on + strandat 3910.606 kb on - strandat 3910.608 kb on - strandat 3910.646 kb on + strandat 3910.656 kb on + strandat 3910.717 kb on + strandat 3910.718 kb on - strandat 3910.718 kb on - strandat 3910.720 kb on - strandat 3910.721 kb on + strandat 3910.721 kb on + strandat 3910.805 kb on + strand, within CA264_16770at 3910.913 kb on - strand, within CA264_16770at 3910.915 kb on + strand, within CA264_16770at 3910.915 kb on + strand, within CA264_16770at 3910.916 kb on - strand, within CA264_16770at 3910.936 kb on - strand, within CA264_16770at 3910.936 kb on - strand, within CA264_16770at 3911.090 kb on - strandat 3911.141 kb on - strandat 3911.144 kb on + strandat 3911.144 kb on + strandat 3911.144 kb on + strandat 3911.144 kb on + strandat 3911.145 kb on - strandat 3911.146 kb on + strandat 3911.147 kb on - strandat 3911.189 kb on - strandat 3911.189 kb on - strandat 3911.316 kb on + strandat 3911.317 kb on - strandat 3911.320 kb on + strandat 3911.321 kb on - strandat 3911.321 kb on - strandat 3911.321 kb on - strandat 3911.323 kb on - strandat 3911.357 kb on + strandat 3911.361 kb on - strandat 3911.364 kb on + strandat 3911.380 kb on - strandat 3911.388 kb on - strandat 3911.472 kb on + strand, within CA264_16775at 3911.532 kb on + strand, within CA264_16775at 3911.532 kb on + strand, within CA264_16775at 3911.533 kb on - strand, within CA264_16775at 3911.533 kb on - strand, within CA264_16775

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM
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3,908,464 + CA264_16760 0.59 +0.2
3,908,464 + CA264_16760 0.59 +0.4
3,908,465 - CA264_16760 0.59 -0.1
3,908,465 - CA264_16760 0.59 +1.0
3,908,468 + CA264_16760 0.59 +0.0
3,908,469 - CA264_16760 0.59 +0.1
3,908,536 + CA264_16760 0.63 +0.4
3,908,547 - CA264_16760 0.63 +1.2
3,908,547 - CA264_16760 0.63 +0.7
3,908,598 + CA264_16760 0.66 +0.3
3,908,598 + CA264_16760 0.66 -0.1
3,908,599 - CA264_16760 0.66 -0.8
3,908,603 + CA264_16760 0.66 -0.5
3,908,603 + CA264_16760 0.66 -1.2
3,908,603 + CA264_16760 0.66 -0.9
3,908,603 + CA264_16760 0.66 +0.4
3,908,603 + CA264_16760 0.66 +0.3
3,908,604 - CA264_16760 0.66 -0.1
3,908,604 - CA264_16760 0.66 +0.6
3,908,604 - CA264_16760 0.66 +0.7
3,908,649 + CA264_16760 0.69 -0.7
3,908,659 + CA264_16760 0.69 +0.9
3,908,661 + CA264_16760 0.70 +0.2
3,908,662 - CA264_16760 0.70 -0.1
3,908,665 + CA264_16760 0.70 +0.3
3,908,740 + CA264_16760 0.74 -0.0
3,908,740 + CA264_16760 0.74 -0.1
3,908,741 - CA264_16760 0.74 -0.6
3,908,741 - CA264_16760 0.74 +0.0
3,908,744 + CA264_16760 0.74 +0.4
3,908,745 - CA264_16760 0.74 +0.1
3,908,745 - CA264_16760 0.74 +1.1
3,908,745 - CA264_16760 0.74 +0.1
3,908,898 - CA264_16760 0.83 +0.8
3,908,901 + CA264_16760 0.83 -0.4
3,908,901 + CA264_16760 0.83 +0.1
3,908,901 + CA264_16760 0.83 +0.4
3,908,902 - CA264_16760 0.83 +0.1
3,908,902 - CA264_16760 0.83 +0.1
3,908,902 - CA264_16760 0.83 +0.3
3,908,924 + CA264_16760 0.84 -0.4
3,908,925 - CA264_16760 0.84 -0.2
3,908,946 - CA264_16760 0.85 -1.5
3,909,212 + +0.2
3,909,233 + -0.1
3,909,234 - +0.7
3,909,254 + -1.1
3,909,254 + -0.9
3,909,316 + +0.4
3,909,382 + +0.2
3,909,382 + -0.6
3,909,383 - -0.1
3,909,437 + +1.4
3,909,590 + CA264_16765 0.15 -0.6
3,909,640 - CA264_16765 0.19 -0.7
3,909,669 + CA264_16765 0.22 -0.4
3,909,874 + CA264_16765 0.40 -1.8
3,909,875 - CA264_16765 0.40 -0.1
3,909,884 - CA264_16765 0.41 -1.7
3,910,043 - CA264_16765 0.55 -0.4
3,910,121 + CA264_16765 0.62 -0.5
3,910,194 - CA264_16765 0.68 -0.3
3,910,194 - CA264_16765 0.68 -1.0
3,910,194 - CA264_16765 0.68 -0.5
3,910,194 - CA264_16765 0.68 +0.3
3,910,203 + CA264_16765 0.69 -0.3
3,910,244 + CA264_16765 0.73 +1.6
3,910,245 - CA264_16765 0.73 -0.5
3,910,352 - CA264_16765 0.82 -1.9
3,910,352 - CA264_16765 0.82 -0.8
3,910,403 + CA264_16765 0.87 -0.6
3,910,410 - CA264_16765 0.87 -0.5
3,910,490 + +0.2
3,910,551 - +1.5
3,910,551 - +1.6
3,910,562 + -0.6
3,910,563 - +0.4
3,910,563 - +0.3
3,910,567 - -0.9
3,910,568 + -0.1
3,910,585 - -0.5
3,910,601 + +0.2
3,910,606 - -0.3
3,910,608 - -0.4
3,910,646 + +1.1
3,910,656 + +0.6
3,910,717 + -0.0
3,910,718 - -0.0
3,910,718 - -0.4
3,910,720 - -0.8
3,910,721 + +0.5
3,910,721 + +0.0
3,910,805 + CA264_16770 0.15 -0.2
3,910,913 - CA264_16770 0.47 +0.5
3,910,915 + CA264_16770 0.47 -0.7
3,910,915 + CA264_16770 0.47 -0.6
3,910,916 - CA264_16770 0.48 -0.2
3,910,936 - CA264_16770 0.54 +0.4
3,910,936 - CA264_16770 0.54 -0.4
3,911,090 - -0.5
3,911,141 - -1.0
3,911,144 + -0.0
3,911,144 + -0.5
3,911,144 + +0.2
3,911,144 + +0.4
3,911,145 - -0.1
3,911,146 + -0.4
3,911,147 - -0.1
3,911,189 - -0.4
3,911,189 - -1.6
3,911,316 + +0.6
3,911,317 - -0.1
3,911,320 + +0.5
3,911,321 - +0.0
3,911,321 - +0.3
3,911,321 - -0.8
3,911,323 - +0.2
3,911,357 + +0.1
3,911,361 - -0.3
3,911,364 + +0.2
3,911,380 - -0.2
3,911,388 - +0.1
3,911,472 + CA264_16775 0.16 +0.4
3,911,532 + CA264_16775 0.24 +1.1
3,911,532 + CA264_16775 0.24 -0.2
3,911,533 - CA264_16775 0.24 -0.2
3,911,533 - CA264_16775 0.24 -0.4

Or see this region's nucleotide sequence