Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13040 and CA264_13045 are separated by 55 nucleotides CA264_13045 and CA264_13050 are separated by 101 nucleotides
CA264_13040: CA264_13040 - acriflavin resistance protein, at 3,037,098 to 3,040,205
_13040
CA264_13045: CA264_13045 - transporter, at 3,040,261 to 3,041,607
_13045
CA264_13050: CA264_13050 - hypothetical protein, at 3,041,709 to 3,042,986
_13050
Position (kb)
3040
3041
3042 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3039.385 kb on - strand, within CA264_13040 at 3039.388 kb on + strand, within CA264_13040 at 3039.412 kb on + strand, within CA264_13040 at 3039.412 kb on + strand, within CA264_13040 at 3039.413 kb on - strand, within CA264_13040 at 3039.729 kb on - strand, within CA264_13040 at 3040.028 kb on + strand at 3040.075 kb on - strand at 3040.075 kb on - strand at 3040.093 kb on - strand at 3040.099 kb on - strand at 3040.204 kb on - strand at 3040.222 kb on + strand at 3040.250 kb on + strand at 3040.251 kb on - strand at 3040.292 kb on + strand at 3040.384 kb on + strand at 3040.384 kb on + strand at 3040.541 kb on + strand, within CA264_13045 at 3040.624 kb on + strand, within CA264_13045 at 3040.680 kb on - strand, within CA264_13045 at 3040.680 kb on - strand, within CA264_13045 at 3040.711 kb on + strand, within CA264_13045 at 3040.714 kb on + strand, within CA264_13045 at 3040.804 kb on + strand, within CA264_13045 at 3040.812 kb on - strand, within CA264_13045 at 3040.855 kb on + strand, within CA264_13045 at 3040.920 kb on - strand, within CA264_13045 at 3041.167 kb on + strand, within CA264_13045 at 3041.167 kb on + strand, within CA264_13045 at 3041.172 kb on + strand, within CA264_13045 at 3041.172 kb on + strand, within CA264_13045 at 3041.211 kb on + strand, within CA264_13045 at 3041.238 kb on + strand, within CA264_13045 at 3041.270 kb on + strand, within CA264_13045 at 3041.292 kb on - strand, within CA264_13045 at 3041.292 kb on - strand, within CA264_13045 at 3041.532 kb on + strand at 3041.533 kb on - strand at 3041.533 kb on - strand at 3041.564 kb on + strand at 3041.565 kb on - strand at 3041.633 kb on - strand at 3041.642 kb on + strand at 3041.661 kb on - strand at 3041.662 kb on + strand at 3041.676 kb on + strand at 3041.677 kb on - strand at 3041.677 kb on - strand at 3041.708 kb on + strand at 3041.709 kb on - strand at 3041.753 kb on - strand at 3041.882 kb on - strand, within CA264_13050 at 3041.903 kb on - strand, within CA264_13050 at 3041.928 kb on + strand, within CA264_13050 at 3041.928 kb on + strand, within CA264_13050 at 3041.929 kb on - strand, within CA264_13050 at 3041.995 kb on - strand, within CA264_13050 at 3041.995 kb on - strand, within CA264_13050 at 3041.995 kb on - strand, within CA264_13050 at 3042.027 kb on - strand, within CA264_13050 at 3042.047 kb on - strand, within CA264_13050 at 3042.076 kb on + strand, within CA264_13050 at 3042.160 kb on + strand, within CA264_13050 at 3042.319 kb on + strand, within CA264_13050 at 3042.411 kb on - strand, within CA264_13050 at 3042.411 kb on - strand, within CA264_13050 at 3042.423 kb on - strand, within CA264_13050 at 3042.452 kb on + strand, within CA264_13050 at 3042.452 kb on + strand, within CA264_13050 at 3042.454 kb on + strand, within CA264_13050 at 3042.454 kb on + strand, within CA264_13050 at 3042.454 kb on + strand, within CA264_13050 at 3042.552 kb on + strand, within CA264_13050 at 3042.553 kb on - strand, within CA264_13050
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 3,039,385 - CA264_13040 0.74 +1.1 3,039,388 + CA264_13040 0.74 -1.9 3,039,412 + CA264_13040 0.74 +0.7 3,039,412 + CA264_13040 0.74 -0.3 3,039,413 - CA264_13040 0.74 +0.1 3,039,729 - CA264_13040 0.85 -0.9 3,040,028 + +1.2 3,040,075 - -0.0 3,040,075 - -0.0 3,040,093 - +0.9 3,040,099 - -0.5 3,040,204 - +1.4 3,040,222 + -0.4 3,040,250 + +1.4 3,040,251 - +0.5 3,040,292 + -0.9 3,040,384 + -0.2 3,040,384 + +0.3 3,040,541 + CA264_13045 0.21 -0.3 3,040,624 + CA264_13045 0.27 -0.2 3,040,680 - CA264_13045 0.31 +0.3 3,040,680 - CA264_13045 0.31 -0.0 3,040,711 + CA264_13045 0.33 +0.3 3,040,714 + CA264_13045 0.34 -0.2 3,040,804 + CA264_13045 0.40 +0.5 3,040,812 - CA264_13045 0.41 +0.5 3,040,855 + CA264_13045 0.44 -0.4 3,040,920 - CA264_13045 0.49 +0.5 3,041,167 + CA264_13045 0.67 -0.0 3,041,167 + CA264_13045 0.67 -0.4 3,041,172 + CA264_13045 0.68 -0.6 3,041,172 + CA264_13045 0.68 -1.5 3,041,211 + CA264_13045 0.71 -0.4 3,041,238 + CA264_13045 0.73 +1.1 3,041,270 + CA264_13045 0.75 +0.4 3,041,292 - CA264_13045 0.77 -0.4 3,041,292 - CA264_13045 0.77 +0.6 3,041,532 + -0.0 3,041,533 - +0.6 3,041,533 - -0.8 3,041,564 + +0.1 3,041,565 - +0.1 3,041,633 - +0.2 3,041,642 + -0.1 3,041,661 - -0.1 3,041,662 + -0.1 3,041,676 + +0.3 3,041,677 - +0.7 3,041,677 - +0.6 3,041,708 + -0.1 3,041,709 - +0.3 3,041,753 - +1.1 3,041,882 - CA264_13050 0.14 +1.4 3,041,903 - CA264_13050 0.15 +1.2 3,041,928 + CA264_13050 0.17 -0.1 3,041,928 + CA264_13050 0.17 +0.1 3,041,929 - CA264_13050 0.17 +0.2 3,041,995 - CA264_13050 0.22 -1.7 3,041,995 - CA264_13050 0.22 -0.1 3,041,995 - CA264_13050 0.22 -0.1 3,042,027 - CA264_13050 0.25 -0.1 3,042,047 - CA264_13050 0.26 -0.1 3,042,076 + CA264_13050 0.29 -0.0 3,042,160 + CA264_13050 0.35 -1.8 3,042,319 + CA264_13050 0.48 +0.6 3,042,411 - CA264_13050 0.55 +0.3 3,042,411 - CA264_13050 0.55 +0.9 3,042,423 - CA264_13050 0.56 -0.3 3,042,452 + CA264_13050 0.58 +1.2 3,042,452 + CA264_13050 0.58 -1.0 3,042,454 + CA264_13050 0.58 -0.1 3,042,454 + CA264_13050 0.58 +0.6 3,042,454 + CA264_13050 0.58 +1.9 3,042,552 + CA264_13050 0.66 +0.7 3,042,553 - CA264_13050 0.66 +0.1
Or see this region's nucleotide sequence