Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12985 and CA264_12990 are separated by 60 nucleotides CA264_12990 and CA264_12995 are separated by 182 nucleotides CA264_12995 and CA264_13000 are separated by 154 nucleotides CA264_13000 and CA264_13005 are separated by 114 nucleotides
CA264_12985: CA264_12985 - hypothetical protein, at 3,028,880 to 3,029,173
_12985
CA264_12990: CA264_12990 - ferritin, at 3,029,234 to 3,029,770
_12990
CA264_12995: CA264_12995 - hypothetical protein, at 3,029,953 to 3,030,306
_12995
CA264_13000: CA264_13000 - cupin, at 3,030,461 to 3,030,835
_13000
CA264_13005: CA264_13005 - hypothetical protein, at 3,030,950 to 3,031,996
_13005
Position (kb)
3029
3030
3031 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3029.063 kb on - strand, within CA264_12985 at 3029.068 kb on + strand, within CA264_12985 at 3029.069 kb on - strand, within CA264_12985 at 3029.069 kb on - strand, within CA264_12985 at 3029.218 kb on + strand at 3029.229 kb on + strand at 3029.289 kb on + strand, within CA264_12990 at 3029.349 kb on + strand, within CA264_12990 at 3029.350 kb on - strand, within CA264_12990 at 3029.350 kb on - strand, within CA264_12990 at 3029.350 kb on - strand, within CA264_12990 at 3029.384 kb on + strand, within CA264_12990 at 3029.404 kb on - strand, within CA264_12990 at 3029.460 kb on - strand, within CA264_12990 at 3029.525 kb on + strand, within CA264_12990 at 3029.526 kb on - strand, within CA264_12990 at 3029.615 kb on - strand, within CA264_12990 at 3029.673 kb on + strand, within CA264_12990 at 3029.673 kb on + strand, within CA264_12990 at 3029.673 kb on + strand, within CA264_12990 at 3029.674 kb on - strand, within CA264_12990 at 3029.726 kb on + strand at 3029.726 kb on + strand at 3029.727 kb on - strand at 3029.728 kb on + strand at 3029.750 kb on - strand at 3029.771 kb on - strand at 3029.785 kb on - strand at 3029.788 kb on + strand at 3029.791 kb on + strand at 3029.792 kb on - strand at 3029.792 kb on - strand at 3029.831 kb on - strand at 3029.831 kb on - strand at 3029.839 kb on - strand at 3029.841 kb on - strand at 3029.841 kb on - strand at 3029.939 kb on - strand at 3030.006 kb on + strand, within CA264_12995 at 3030.007 kb on - strand, within CA264_12995 at 3030.065 kb on + strand, within CA264_12995 at 3030.065 kb on + strand, within CA264_12995 at 3030.065 kb on + strand, within CA264_12995 at 3030.066 kb on - strand, within CA264_12995 at 3030.066 kb on - strand, within CA264_12995 at 3030.145 kb on - strand, within CA264_12995 at 3030.250 kb on + strand, within CA264_12995 at 3030.250 kb on + strand, within CA264_12995 at 3030.318 kb on + strand at 3030.318 kb on + strand at 3030.319 kb on - strand at 3030.357 kb on + strand at 3030.388 kb on - strand at 3030.474 kb on + strand at 3030.475 kb on - strand at 3030.475 kb on - strand at 3030.562 kb on + strand, within CA264_13000 at 3030.857 kb on - strand at 3030.892 kb on + strand at 3030.895 kb on - strand at 3030.895 kb on - strand at 3030.895 kb on - strand at 3030.895 kb on - strand at 3030.895 kb on - strand at 3030.895 kb on - strand at 3030.898 kb on + strand at 3030.899 kb on - strand at 3030.899 kb on - strand at 3030.899 kb on - strand at 3030.901 kb on - strand at 3030.901 kb on - strand at 3030.904 kb on + strand at 3030.904 kb on + strand at 3030.905 kb on - strand at 3030.905 kb on - strand at 3030.905 kb on - strand at 3030.906 kb on + strand at 3030.906 kb on + strand at 3030.906 kb on + strand at 3030.906 kb on + strand at 3030.907 kb on - strand at 3030.907 kb on - strand at 3030.907 kb on - strand at 3030.910 kb on + strand at 3030.912 kb on + strand at 3030.912 kb on + strand at 3030.912 kb on + strand at 3030.913 kb on - strand at 3030.916 kb on + strand at 3030.916 kb on + strand at 3030.916 kb on + strand at 3030.916 kb on + strand at 3030.916 kb on + strand at 3030.917 kb on - strand at 3030.917 kb on - strand at 3030.917 kb on - strand at 3030.918 kb on + strand at 3030.918 kb on + strand at 3030.922 kb on + strand at 3030.922 kb on + strand at 3030.924 kb on + strand at 3031.079 kb on + strand, within CA264_13005 at 3031.282 kb on - strand, within CA264_13005
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 3,029,063 - CA264_12985 0.62 +0.2 3,029,068 + CA264_12985 0.64 -0.0 3,029,069 - CA264_12985 0.64 -1.3 3,029,069 - CA264_12985 0.64 +0.2 3,029,218 + +1.0 3,029,229 + -0.2 3,029,289 + CA264_12990 0.10 +1.5 3,029,349 + CA264_12990 0.21 +0.7 3,029,350 - CA264_12990 0.22 +1.8 3,029,350 - CA264_12990 0.22 +1.5 3,029,350 - CA264_12990 0.22 -0.7 3,029,384 + CA264_12990 0.28 -0.3 3,029,404 - CA264_12990 0.32 -0.1 3,029,460 - CA264_12990 0.42 -0.0 3,029,525 + CA264_12990 0.54 -0.4 3,029,526 - CA264_12990 0.54 +0.2 3,029,615 - CA264_12990 0.71 +0.7 3,029,673 + CA264_12990 0.82 +0.7 3,029,673 + CA264_12990 0.82 -2.1 3,029,673 + CA264_12990 0.82 -1.2 3,029,674 - CA264_12990 0.82 +0.6 3,029,726 + -0.4 3,029,726 + -1.0 3,029,727 - +0.4 3,029,728 + +2.8 3,029,750 - +1.4 3,029,771 - -0.3 3,029,785 - -0.4 3,029,788 + -0.3 3,029,791 + -0.6 3,029,792 - -1.2 3,029,792 - -0.5 3,029,831 - -0.9 3,029,831 - -0.1 3,029,839 - -0.4 3,029,841 - +0.8 3,029,841 - -1.0 3,029,939 - +0.8 3,030,006 + CA264_12995 0.15 -0.0 3,030,007 - CA264_12995 0.15 -0.4 3,030,065 + CA264_12995 0.32 -1.1 3,030,065 + CA264_12995 0.32 +0.8 3,030,065 + CA264_12995 0.32 -0.3 3,030,066 - CA264_12995 0.32 -0.1 3,030,066 - CA264_12995 0.32 -1.0 3,030,145 - CA264_12995 0.54 -1.1 3,030,250 + CA264_12995 0.84 -0.8 3,030,250 + CA264_12995 0.84 -1.9 3,030,318 + +2.4 3,030,318 + -0.5 3,030,319 - +0.3 3,030,357 + -0.4 3,030,388 - +1.6 3,030,474 + +0.2 3,030,475 - -0.7 3,030,475 - -0.2 3,030,562 + CA264_13000 0.27 -0.2 3,030,857 - -0.3 3,030,892 + -2.4 3,030,895 - -0.7 3,030,895 - -0.7 3,030,895 - +0.1 3,030,895 - -1.4 3,030,895 - +0.0 3,030,895 - -1.4 3,030,898 + -0.6 3,030,899 - -1.5 3,030,899 - -0.3 3,030,899 - -0.0 3,030,901 - +0.2 3,030,901 - -1.0 3,030,904 + -0.4 3,030,904 + +1.4 3,030,905 - +0.1 3,030,905 - +0.1 3,030,905 - -0.4 3,030,906 + +0.2 3,030,906 + +0.8 3,030,906 + -1.2 3,030,906 + +0.3 3,030,907 - -0.5 3,030,907 - +1.4 3,030,907 - -0.8 3,030,910 + -1.7 3,030,912 + -0.4 3,030,912 + -0.6 3,030,912 + -0.6 3,030,913 - -0.9 3,030,916 + -1.0 3,030,916 + -0.3 3,030,916 + -1.2 3,030,916 + -1.5 3,030,916 + -1.0 3,030,917 - -0.1 3,030,917 - +0.3 3,030,917 - -0.7 3,030,918 + -1.5 3,030,918 + -1.8 3,030,922 + -1.2 3,030,922 + -0.9 3,030,924 + -0.5 3,031,079 + CA264_13005 0.12 -0.7 3,031,282 - CA264_13005 0.32 -0.3
Or see this region's nucleotide sequence