Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08785 and CA264_08790 are separated by 7 nucleotides CA264_08790 and CA264_08795 overlap by 4 nucleotides CA264_08795 and CA264_08800 overlap by 4 nucleotides CA264_08800 and CA264_08805 are separated by 8 nucleotides
CA264_08785: CA264_08785 - hypothetical protein, at 2,051,432 to 2,052,622
_08785
CA264_08790: CA264_08790 - LamB/YcsF family protein, at 2,052,630 to 2,053,391
_08790
CA264_08795: CA264_08795 - KipI antagonist, at 2,053,388 to 2,054,401
_08795
CA264_08800: CA264_08800 - kinase inhibitor, at 2,054,398 to 2,055,126
_08800
CA264_08805: CA264_08805 - inosine/xanthosine triphosphatase, at 2,055,135 to 2,055,701
_08805
Position (kb)
2053
2054
2055 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2052.409 kb on + strand, within CA264_08785 at 2052.450 kb on - strand, within CA264_08785 at 2052.456 kb on - strand, within CA264_08785 at 2052.481 kb on + strand, within CA264_08785 at 2052.739 kb on - strand, within CA264_08790 at 2052.823 kb on - strand, within CA264_08790 at 2052.878 kb on + strand, within CA264_08790 at 2052.879 kb on - strand, within CA264_08790 at 2052.879 kb on - strand, within CA264_08790 at 2052.879 kb on - strand, within CA264_08790 at 2052.958 kb on + strand, within CA264_08790 at 2052.963 kb on + strand, within CA264_08790 at 2052.963 kb on + strand, within CA264_08790 at 2052.965 kb on + strand, within CA264_08790 at 2052.965 kb on + strand, within CA264_08790 at 2052.965 kb on + strand, within CA264_08790 at 2052.978 kb on + strand, within CA264_08790 at 2052.979 kb on - strand, within CA264_08790 at 2052.979 kb on - strand, within CA264_08790 at 2053.040 kb on - strand, within CA264_08790 at 2053.118 kb on - strand, within CA264_08790 at 2053.132 kb on + strand, within CA264_08790 at 2053.132 kb on + strand, within CA264_08790 at 2053.133 kb on - strand, within CA264_08790 at 2053.273 kb on + strand, within CA264_08790 at 2053.274 kb on - strand, within CA264_08790 at 2053.298 kb on + strand, within CA264_08790 at 2053.298 kb on + strand, within CA264_08790 at 2053.401 kb on - strand at 2053.401 kb on - strand at 2053.453 kb on - strand at 2053.457 kb on + strand at 2053.458 kb on - strand at 2053.458 kb on - strand at 2053.458 kb on - strand at 2053.595 kb on - strand, within CA264_08795 at 2053.638 kb on + strand, within CA264_08795 at 2053.639 kb on - strand, within CA264_08795 at 2053.639 kb on - strand, within CA264_08795 at 2053.685 kb on + strand, within CA264_08795 at 2053.687 kb on + strand, within CA264_08795 at 2053.687 kb on + strand, within CA264_08795 at 2053.687 kb on + strand, within CA264_08795 at 2053.687 kb on + strand, within CA264_08795 at 2053.687 kb on + strand, within CA264_08795 at 2053.688 kb on - strand, within CA264_08795 at 2053.688 kb on - strand, within CA264_08795 at 2053.688 kb on - strand, within CA264_08795 at 2053.691 kb on - strand, within CA264_08795 at 2053.730 kb on + strand, within CA264_08795 at 2053.731 kb on - strand, within CA264_08795 at 2053.753 kb on + strand, within CA264_08795 at 2053.753 kb on + strand, within CA264_08795 at 2053.753 kb on + strand, within CA264_08795 at 2053.754 kb on - strand, within CA264_08795 at 2053.755 kb on + strand, within CA264_08795 at 2053.775 kb on - strand, within CA264_08795 at 2053.775 kb on - strand, within CA264_08795 at 2053.786 kb on - strand, within CA264_08795 at 2053.828 kb on - strand, within CA264_08795 at 2053.911 kb on - strand, within CA264_08795 at 2054.008 kb on - strand, within CA264_08795 at 2054.011 kb on + strand, within CA264_08795 at 2054.012 kb on - strand, within CA264_08795 at 2054.065 kb on - strand, within CA264_08795 at 2054.070 kb on + strand, within CA264_08795 at 2054.071 kb on - strand, within CA264_08795 at 2054.071 kb on - strand, within CA264_08795 at 2054.385 kb on - strand at 2054.474 kb on - strand, within CA264_08800 at 2054.605 kb on + strand, within CA264_08800 at 2054.607 kb on + strand, within CA264_08800 at 2054.608 kb on - strand, within CA264_08800 at 2054.608 kb on - strand, within CA264_08800 at 2054.705 kb on + strand, within CA264_08800 at 2054.705 kb on + strand, within CA264_08800 at 2054.754 kb on + strand, within CA264_08800 at 2054.798 kb on + strand, within CA264_08800 at 2054.798 kb on + strand, within CA264_08800 at 2054.799 kb on - strand, within CA264_08800 at 2054.891 kb on + strand, within CA264_08800 at 2054.934 kb on - strand, within CA264_08800 at 2054.934 kb on - strand, within CA264_08800 at 2054.966 kb on + strand, within CA264_08800 at 2054.967 kb on - strand, within CA264_08800 at 2054.967 kb on - strand, within CA264_08800 at 2054.967 kb on - strand, within CA264_08800 at 2055.028 kb on + strand, within CA264_08800 at 2055.029 kb on - strand, within CA264_08800 at 2055.039 kb on + strand, within CA264_08800 at 2055.039 kb on + strand, within CA264_08800 at 2055.040 kb on - strand, within CA264_08800 at 2055.043 kb on + strand, within CA264_08800 at 2055.043 kb on + strand, within CA264_08800 at 2055.092 kb on - strand at 2055.126 kb on + strand at 2055.126 kb on + strand at 2055.130 kb on + strand at 2055.130 kb on + strand at 2055.130 kb on + strand at 2055.130 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 2,052,409 + CA264_08785 0.82 -0.4 2,052,450 - CA264_08785 0.85 -0.1 2,052,456 - CA264_08785 0.86 -0.5 2,052,481 + CA264_08785 0.88 +2.2 2,052,739 - CA264_08790 0.14 -0.4 2,052,823 - CA264_08790 0.25 -0.4 2,052,878 + CA264_08790 0.33 +0.2 2,052,879 - CA264_08790 0.33 -0.1 2,052,879 - CA264_08790 0.33 +1.2 2,052,879 - CA264_08790 0.33 +0.3 2,052,958 + CA264_08790 0.43 -0.1 2,052,963 + CA264_08790 0.44 -0.6 2,052,963 + CA264_08790 0.44 +0.4 2,052,965 + CA264_08790 0.44 +1.0 2,052,965 + CA264_08790 0.44 -0.4 2,052,965 + CA264_08790 0.44 +0.7 2,052,978 + CA264_08790 0.46 -0.5 2,052,979 - CA264_08790 0.46 -2.4 2,052,979 - CA264_08790 0.46 +0.1 2,053,040 - CA264_08790 0.54 -0.1 2,053,118 - CA264_08790 0.64 -0.1 2,053,132 + CA264_08790 0.66 +0.4 2,053,132 + CA264_08790 0.66 -0.4 2,053,133 - CA264_08790 0.66 +0.0 2,053,273 + CA264_08790 0.84 -1.3 2,053,274 - CA264_08790 0.85 +0.1 2,053,298 + CA264_08790 0.88 +0.1 2,053,298 + CA264_08790 0.88 -0.2 2,053,401 - -0.9 2,053,401 - +0.5 2,053,453 - -0.0 2,053,457 + -0.8 2,053,458 - +0.7 2,053,458 - -0.3 2,053,458 - -0.6 2,053,595 - CA264_08795 0.20 -0.1 2,053,638 + CA264_08795 0.25 +0.2 2,053,639 - CA264_08795 0.25 -0.2 2,053,639 - CA264_08795 0.25 +1.6 2,053,685 + CA264_08795 0.29 +0.1 2,053,687 + CA264_08795 0.29 -0.9 2,053,687 + CA264_08795 0.29 +0.0 2,053,687 + CA264_08795 0.29 +0.9 2,053,687 + CA264_08795 0.29 -0.4 2,053,687 + CA264_08795 0.29 +0.0 2,053,688 - CA264_08795 0.30 +0.3 2,053,688 - CA264_08795 0.30 -0.0 2,053,688 - CA264_08795 0.30 +0.4 2,053,691 - CA264_08795 0.30 +0.5 2,053,730 + CA264_08795 0.34 +0.6 2,053,731 - CA264_08795 0.34 +1.2 2,053,753 + CA264_08795 0.36 -0.0 2,053,753 + CA264_08795 0.36 +0.8 2,053,753 + CA264_08795 0.36 +0.0 2,053,754 - CA264_08795 0.36 -0.1 2,053,755 + CA264_08795 0.36 -0.2 2,053,775 - CA264_08795 0.38 -0.6 2,053,775 - CA264_08795 0.38 +0.2 2,053,786 - CA264_08795 0.39 +0.1 2,053,828 - CA264_08795 0.43 -0.4 2,053,911 - CA264_08795 0.52 -0.8 2,054,008 - CA264_08795 0.61 +0.8 2,054,011 + CA264_08795 0.61 -0.5 2,054,012 - CA264_08795 0.62 +0.3 2,054,065 - CA264_08795 0.67 +0.1 2,054,070 + CA264_08795 0.67 +2.0 2,054,071 - CA264_08795 0.67 +0.2 2,054,071 - CA264_08795 0.67 -0.8 2,054,385 - -0.2 2,054,474 - CA264_08800 0.10 +0.1 2,054,605 + CA264_08800 0.28 +0.7 2,054,607 + CA264_08800 0.29 +0.1 2,054,608 - CA264_08800 0.29 -0.7 2,054,608 - CA264_08800 0.29 -1.0 2,054,705 + CA264_08800 0.42 -1.0 2,054,705 + CA264_08800 0.42 +0.2 2,054,754 + CA264_08800 0.49 -0.1 2,054,798 + CA264_08800 0.55 +0.1 2,054,798 + CA264_08800 0.55 +0.7 2,054,799 - CA264_08800 0.55 +0.4 2,054,891 + CA264_08800 0.68 -0.9 2,054,934 - CA264_08800 0.74 -0.4 2,054,934 - CA264_08800 0.74 -1.2 2,054,966 + CA264_08800 0.78 +0.8 2,054,967 - CA264_08800 0.78 +0.0 2,054,967 - CA264_08800 0.78 -0.1 2,054,967 - CA264_08800 0.78 +0.6 2,055,028 + CA264_08800 0.86 -0.2 2,055,029 - CA264_08800 0.87 +0.6 2,055,039 + CA264_08800 0.88 +2.2 2,055,039 + CA264_08800 0.88 +0.2 2,055,040 - CA264_08800 0.88 +0.4 2,055,043 + CA264_08800 0.88 +0.7 2,055,043 + CA264_08800 0.88 +0.1 2,055,092 - -0.8 2,055,126 + +0.4 2,055,126 + -0.0 2,055,130 + -1.0 2,055,130 + -0.6 2,055,130 + +0.2 2,055,130 - -0.7
Or see this region's nucleotide sequence