Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07035 and CA264_07040 overlap by 23 nucleotides CA264_07040 and CA264_07045 are separated by 243 nucleotides
CA264_07035: CA264_07035 - hypothetical protein, at 1,621,722 to 1,622,843
_07035
CA264_07040: CA264_07040 - 8-amino-7-oxononanoate synthase, at 1,622,821 to 1,624,062
_07040
CA264_07045: CA264_07045 - TetR family transcriptional regulator, at 1,624,306 to 1,624,896
_07045
Position (kb)
1622
1623
1624
1625 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1621.873 kb on + strand, within CA264_07035 at 1621.965 kb on + strand, within CA264_07035 at 1621.966 kb on - strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.971 kb on - strand, within CA264_07035 at 1621.971 kb on - strand, within CA264_07035 at 1622.026 kb on - strand, within CA264_07035 at 1622.036 kb on + strand, within CA264_07035 at 1622.077 kb on - strand, within CA264_07035 at 1622.126 kb on - strand, within CA264_07035 at 1622.186 kb on - strand, within CA264_07035 at 1622.218 kb on + strand, within CA264_07035 at 1622.218 kb on + strand, within CA264_07035 at 1622.219 kb on - strand, within CA264_07035 at 1622.219 kb on - strand, within CA264_07035 at 1622.250 kb on - strand, within CA264_07035 at 1622.277 kb on + strand, within CA264_07035 at 1622.278 kb on - strand, within CA264_07035 at 1622.308 kb on + strand, within CA264_07035 at 1622.386 kb on + strand, within CA264_07035 at 1622.387 kb on - strand, within CA264_07035 at 1622.392 kb on + strand, within CA264_07035 at 1622.398 kb on + strand, within CA264_07035 at 1622.740 kb on + strand at 1622.741 kb on - strand at 1622.741 kb on - strand at 1622.755 kb on + strand at 1622.756 kb on - strand at 1622.756 kb on - strand at 1622.758 kb on + strand at 1622.774 kb on - strand at 1622.843 kb on + strand at 1622.843 kb on + strand at 1622.844 kb on - strand at 1622.844 kb on - strand at 1622.860 kb on - strand at 1622.860 kb on - strand at 1622.860 kb on - strand at 1622.877 kb on + strand at 1622.896 kb on - strand at 1622.951 kb on - strand, within CA264_07040 at 1622.958 kb on + strand, within CA264_07040 at 1623.060 kb on - strand, within CA264_07040 at 1623.063 kb on + strand, within CA264_07040 at 1623.064 kb on - strand, within CA264_07040 at 1623.064 kb on - strand, within CA264_07040 at 1623.064 kb on - strand, within CA264_07040 at 1623.064 kb on - strand, within CA264_07040 at 1623.067 kb on + strand, within CA264_07040 at 1623.067 kb on + strand, within CA264_07040 at 1623.068 kb on - strand, within CA264_07040 at 1623.274 kb on - strand, within CA264_07040 at 1623.327 kb on + strand, within CA264_07040 at 1623.422 kb on - strand, within CA264_07040 at 1623.422 kb on - strand, within CA264_07040 at 1623.422 kb on - strand, within CA264_07040 at 1623.422 kb on - strand, within CA264_07040 at 1623.492 kb on + strand, within CA264_07040 at 1623.571 kb on - strand, within CA264_07040 at 1623.584 kb on + strand, within CA264_07040 at 1623.584 kb on + strand, within CA264_07040 at 1623.628 kb on - strand, within CA264_07040 at 1623.657 kb on + strand, within CA264_07040 at 1623.658 kb on - strand, within CA264_07040 at 1623.659 kb on + strand, within CA264_07040 at 1623.660 kb on - strand, within CA264_07040 at 1623.687 kb on + strand, within CA264_07040 at 1623.847 kb on - strand, within CA264_07040 at 1623.865 kb on - strand, within CA264_07040 at 1623.877 kb on - strand, within CA264_07040 at 1623.877 kb on - strand, within CA264_07040 at 1623.877 kb on - strand, within CA264_07040 at 1623.877 kb on - strand, within CA264_07040 at 1624.207 kb on + strand at 1624.210 kb on + strand at 1624.249 kb on + strand at 1624.257 kb on + strand at 1624.258 kb on - strand at 1624.330 kb on + strand at 1624.332 kb on + strand at 1624.457 kb on + strand, within CA264_07045 at 1624.458 kb on - strand, within CA264_07045 at 1624.458 kb on - strand, within CA264_07045 at 1624.548 kb on + strand, within CA264_07045 at 1624.549 kb on - strand, within CA264_07045 at 1624.549 kb on - strand, within CA264_07045 at 1624.552 kb on - strand, within CA264_07045 at 1624.632 kb on + strand, within CA264_07045 at 1624.747 kb on - strand, within CA264_07045 at 1624.752 kb on + strand, within CA264_07045 at 1624.752 kb on + strand, within CA264_07045 at 1624.752 kb on + strand, within CA264_07045 at 1624.752 kb on + strand, within CA264_07045 at 1624.754 kb on + strand, within CA264_07045 at 1624.754 kb on + strand, within CA264_07045 at 1624.755 kb on - strand, within CA264_07045 at 1624.800 kb on + strand, within CA264_07045 at 1624.829 kb on + strand, within CA264_07045 at 1625.007 kb on + strand at 1625.008 kb on - strand at 1625.008 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,621,873 + CA264_07035 0.13 -1.0 1,621,965 + CA264_07035 0.22 -1.2 1,621,966 - CA264_07035 0.22 -0.5 1,621,970 + CA264_07035 0.22 -0.7 1,621,970 + CA264_07035 0.22 +0.2 1,621,970 + CA264_07035 0.22 -1.2 1,621,971 - CA264_07035 0.22 -0.5 1,621,971 - CA264_07035 0.22 -1.2 1,622,026 - CA264_07035 0.27 +0.1 1,622,036 + CA264_07035 0.28 -0.4 1,622,077 - CA264_07035 0.32 -2.6 1,622,126 - CA264_07035 0.36 -1.1 1,622,186 - CA264_07035 0.41 -1.9 1,622,218 + CA264_07035 0.44 -0.7 1,622,218 + CA264_07035 0.44 -1.1 1,622,219 - CA264_07035 0.44 -0.9 1,622,219 - CA264_07035 0.44 -0.8 1,622,250 - CA264_07035 0.47 -1.2 1,622,277 + CA264_07035 0.49 -1.4 1,622,278 - CA264_07035 0.50 -0.4 1,622,308 + CA264_07035 0.52 +1.2 1,622,386 + CA264_07035 0.59 +0.2 1,622,387 - CA264_07035 0.59 -0.2 1,622,392 + CA264_07035 0.60 +0.2 1,622,398 + CA264_07035 0.60 +0.2 1,622,740 + -0.6 1,622,741 - -2.9 1,622,741 - -0.0 1,622,755 + +0.4 1,622,756 - -1.1 1,622,756 - -0.9 1,622,758 + -0.2 1,622,774 - -1.9 1,622,843 + -0.7 1,622,843 + -0.5 1,622,844 - -1.2 1,622,844 - -0.3 1,622,860 - +0.2 1,622,860 - -0.3 1,622,860 - -2.4 1,622,877 + -1.0 1,622,896 - -0.7 1,622,951 - CA264_07040 0.10 -2.5 1,622,958 + CA264_07040 0.11 -0.9 1,623,060 - CA264_07040 0.19 -0.7 1,623,063 + CA264_07040 0.19 -0.9 1,623,064 - CA264_07040 0.20 -1.3 1,623,064 - CA264_07040 0.20 -2.0 1,623,064 - CA264_07040 0.20 +0.8 1,623,064 - CA264_07040 0.20 -1.7 1,623,067 + CA264_07040 0.20 +0.1 1,623,067 + CA264_07040 0.20 -0.7 1,623,068 - CA264_07040 0.20 +0.6 1,623,274 - CA264_07040 0.36 -1.4 1,623,327 + CA264_07040 0.41 +0.8 1,623,422 - CA264_07040 0.48 -1.7 1,623,422 - CA264_07040 0.48 +0.8 1,623,422 - CA264_07040 0.48 -0.7 1,623,422 - CA264_07040 0.48 -0.3 1,623,492 + CA264_07040 0.54 -1.2 1,623,571 - CA264_07040 0.60 -0.4 1,623,584 + CA264_07040 0.61 -1.9 1,623,584 + CA264_07040 0.61 -0.2 1,623,628 - CA264_07040 0.65 -0.6 1,623,657 + CA264_07040 0.67 +0.1 1,623,658 - CA264_07040 0.67 -0.9 1,623,659 + CA264_07040 0.67 +0.4 1,623,660 - CA264_07040 0.68 +0.7 1,623,687 + CA264_07040 0.70 -0.7 1,623,847 - CA264_07040 0.83 -1.4 1,623,865 - CA264_07040 0.84 +0.8 1,623,877 - CA264_07040 0.85 -1.4 1,623,877 - CA264_07040 0.85 -0.9 1,623,877 - CA264_07040 0.85 -1.2 1,623,877 - CA264_07040 0.85 +0.0 1,624,207 + -0.7 1,624,210 + -0.9 1,624,249 + -0.1 1,624,257 + -0.4 1,624,258 - -0.5 1,624,330 + -0.3 1,624,332 + -0.4 1,624,457 + CA264_07045 0.26 -0.8 1,624,458 - CA264_07045 0.26 -2.8 1,624,458 - CA264_07045 0.26 -3.2 1,624,548 + CA264_07045 0.41 +0.1 1,624,549 - CA264_07045 0.41 -2.1 1,624,549 - CA264_07045 0.41 -1.1 1,624,552 - CA264_07045 0.42 -1.2 1,624,632 + CA264_07045 0.55 -0.3 1,624,747 - CA264_07045 0.75 -2.2 1,624,752 + CA264_07045 0.75 -0.9 1,624,752 + CA264_07045 0.75 -0.8 1,624,752 + CA264_07045 0.75 -1.0 1,624,752 + CA264_07045 0.75 -1.0 1,624,754 + CA264_07045 0.76 -0.3 1,624,754 + CA264_07045 0.76 -0.3 1,624,755 - CA264_07045 0.76 -1.1 1,624,800 + CA264_07045 0.84 -0.4 1,624,829 + CA264_07045 0.88 -0.6 1,625,007 + +1.1 1,625,008 - -0.3 1,625,008 - -0.8
Or see this region's nucleotide sequence