Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07030 and CA264_07035 overlap by 4 nucleotides CA264_07035 and CA264_07040 overlap by 23 nucleotides
CA264_07030: CA264_07030 - UDP-glucose 4-epimerase, at 1,620,733 to 1,621,725
_07030
CA264_07035: CA264_07035 - hypothetical protein, at 1,621,722 to 1,622,843
_07035
CA264_07040: CA264_07040 - 8-amino-7-oxononanoate synthase, at 1,622,821 to 1,624,062
_07040
Position (kb)
1621
1622
1623 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1620.724 kb on - strand at 1620.745 kb on - strand at 1620.763 kb on + strand at 1620.986 kb on - strand, within CA264_07030 at 1621.025 kb on + strand, within CA264_07030 at 1621.049 kb on + strand, within CA264_07030 at 1621.050 kb on - strand, within CA264_07030 at 1621.050 kb on - strand, within CA264_07030 at 1621.050 kb on - strand, within CA264_07030 at 1621.113 kb on - strand, within CA264_07030 at 1621.149 kb on - strand, within CA264_07030 at 1621.149 kb on - strand, within CA264_07030 at 1621.149 kb on - strand, within CA264_07030 at 1621.186 kb on - strand, within CA264_07030 at 1621.211 kb on + strand, within CA264_07030 at 1621.265 kb on + strand, within CA264_07030 at 1621.266 kb on - strand, within CA264_07030 at 1621.296 kb on - strand, within CA264_07030 at 1621.331 kb on - strand, within CA264_07030 at 1621.332 kb on + strand, within CA264_07030 at 1621.406 kb on - strand, within CA264_07030 at 1621.514 kb on + strand, within CA264_07030 at 1621.520 kb on + strand, within CA264_07030 at 1621.543 kb on + strand, within CA264_07030 at 1621.579 kb on - strand, within CA264_07030 at 1621.580 kb on + strand, within CA264_07030 at 1621.581 kb on - strand, within CA264_07030 at 1621.581 kb on - strand, within CA264_07030 at 1621.585 kb on + strand, within CA264_07030 at 1621.586 kb on - strand, within CA264_07030 at 1621.637 kb on + strand at 1621.639 kb on + strand at 1621.639 kb on + strand at 1621.640 kb on - strand at 1621.648 kb on - strand at 1621.726 kb on - strand at 1621.748 kb on - strand at 1621.756 kb on + strand at 1621.756 kb on + strand at 1621.757 kb on - strand at 1621.873 kb on + strand, within CA264_07035 at 1621.965 kb on + strand, within CA264_07035 at 1621.966 kb on - strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.971 kb on - strand, within CA264_07035 at 1621.971 kb on - strand, within CA264_07035 at 1622.026 kb on - strand, within CA264_07035 at 1622.036 kb on + strand, within CA264_07035 at 1622.077 kb on - strand, within CA264_07035 at 1622.126 kb on - strand, within CA264_07035 at 1622.186 kb on - strand, within CA264_07035 at 1622.218 kb on + strand, within CA264_07035 at 1622.218 kb on + strand, within CA264_07035 at 1622.219 kb on - strand, within CA264_07035 at 1622.219 kb on - strand, within CA264_07035 at 1622.250 kb on - strand, within CA264_07035 at 1622.277 kb on + strand, within CA264_07035 at 1622.278 kb on - strand, within CA264_07035 at 1622.308 kb on + strand, within CA264_07035 at 1622.386 kb on + strand, within CA264_07035 at 1622.387 kb on - strand, within CA264_07035 at 1622.392 kb on + strand, within CA264_07035 at 1622.398 kb on + strand, within CA264_07035 at 1622.740 kb on + strand at 1622.741 kb on - strand at 1622.741 kb on - strand at 1622.755 kb on + strand at 1622.756 kb on - strand at 1622.756 kb on - strand at 1622.758 kb on + strand at 1622.774 kb on - strand at 1622.843 kb on + strand at 1622.843 kb on + strand at 1622.844 kb on - strand at 1622.844 kb on - strand at 1622.860 kb on - strand at 1622.860 kb on - strand at 1622.860 kb on - strand at 1622.877 kb on + strand at 1622.896 kb on - strand at 1622.951 kb on - strand, within CA264_07040 at 1622.958 kb on + strand, within CA264_07040 at 1623.060 kb on - strand, within CA264_07040 at 1623.063 kb on + strand, within CA264_07040 at 1623.064 kb on - strand, within CA264_07040 at 1623.064 kb on - strand, within CA264_07040 at 1623.064 kb on - strand, within CA264_07040 at 1623.064 kb on - strand, within CA264_07040 at 1623.067 kb on + strand, within CA264_07040 at 1623.067 kb on + strand, within CA264_07040 at 1623.068 kb on - strand, within CA264_07040 at 1623.274 kb on - strand, within CA264_07040 at 1623.327 kb on + strand, within CA264_07040 at 1623.422 kb on - strand, within CA264_07040 at 1623.422 kb on - strand, within CA264_07040 at 1623.422 kb on - strand, within CA264_07040 at 1623.422 kb on - strand, within CA264_07040 at 1623.492 kb on + strand, within CA264_07040 at 1623.571 kb on - strand, within CA264_07040 at 1623.584 kb on + strand, within CA264_07040 at 1623.584 kb on + strand, within CA264_07040 at 1623.628 kb on - strand, within CA264_07040 at 1623.657 kb on + strand, within CA264_07040 at 1623.658 kb on - strand, within CA264_07040 at 1623.659 kb on + strand, within CA264_07040 at 1623.660 kb on - strand, within CA264_07040 at 1623.687 kb on + strand, within CA264_07040
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,620,724 - -0.1 1,620,745 - +1.2 1,620,763 + +2.6 1,620,986 - CA264_07030 0.25 +1.4 1,621,025 + CA264_07030 0.29 +2.4 1,621,049 + CA264_07030 0.32 +1.8 1,621,050 - CA264_07030 0.32 +2.3 1,621,050 - CA264_07030 0.32 +0.7 1,621,050 - CA264_07030 0.32 +1.5 1,621,113 - CA264_07030 0.38 +1.7 1,621,149 - CA264_07030 0.42 +1.9 1,621,149 - CA264_07030 0.42 +1.1 1,621,149 - CA264_07030 0.42 +1.5 1,621,186 - CA264_07030 0.46 +1.8 1,621,211 + CA264_07030 0.48 +2.0 1,621,265 + CA264_07030 0.54 +1.5 1,621,266 - CA264_07030 0.54 +2.1 1,621,296 - CA264_07030 0.57 +1.9 1,621,331 - CA264_07030 0.60 +1.4 1,621,332 + CA264_07030 0.60 +1.0 1,621,406 - CA264_07030 0.68 +2.2 1,621,514 + CA264_07030 0.79 +1.8 1,621,520 + CA264_07030 0.79 +1.1 1,621,543 + CA264_07030 0.82 +1.2 1,621,579 - CA264_07030 0.85 +0.8 1,621,580 + CA264_07030 0.85 +2.7 1,621,581 - CA264_07030 0.85 +2.0 1,621,581 - CA264_07030 0.85 +1.5 1,621,585 + CA264_07030 0.86 +1.8 1,621,586 - CA264_07030 0.86 +1.5 1,621,637 + +2.0 1,621,639 + +1.9 1,621,639 + +1.2 1,621,640 - +2.3 1,621,648 - +1.6 1,621,726 - -0.9 1,621,748 - -2.1 1,621,756 + -1.0 1,621,756 + -0.2 1,621,757 - +0.5 1,621,873 + CA264_07035 0.13 -1.0 1,621,965 + CA264_07035 0.22 -1.2 1,621,966 - CA264_07035 0.22 -0.5 1,621,970 + CA264_07035 0.22 -0.7 1,621,970 + CA264_07035 0.22 +0.2 1,621,970 + CA264_07035 0.22 -1.2 1,621,971 - CA264_07035 0.22 -0.5 1,621,971 - CA264_07035 0.22 -1.2 1,622,026 - CA264_07035 0.27 +0.1 1,622,036 + CA264_07035 0.28 -0.4 1,622,077 - CA264_07035 0.32 -2.6 1,622,126 - CA264_07035 0.36 -1.1 1,622,186 - CA264_07035 0.41 -1.9 1,622,218 + CA264_07035 0.44 -0.7 1,622,218 + CA264_07035 0.44 -1.1 1,622,219 - CA264_07035 0.44 -0.9 1,622,219 - CA264_07035 0.44 -0.8 1,622,250 - CA264_07035 0.47 -1.2 1,622,277 + CA264_07035 0.49 -1.4 1,622,278 - CA264_07035 0.50 -0.4 1,622,308 + CA264_07035 0.52 +1.2 1,622,386 + CA264_07035 0.59 +0.2 1,622,387 - CA264_07035 0.59 -0.2 1,622,392 + CA264_07035 0.60 +0.2 1,622,398 + CA264_07035 0.60 +0.2 1,622,740 + -0.6 1,622,741 - -2.9 1,622,741 - -0.0 1,622,755 + +0.4 1,622,756 - -1.1 1,622,756 - -0.9 1,622,758 + -0.2 1,622,774 - -1.9 1,622,843 + -0.7 1,622,843 + -0.5 1,622,844 - -1.2 1,622,844 - -0.3 1,622,860 - +0.2 1,622,860 - -0.3 1,622,860 - -2.4 1,622,877 + -1.0 1,622,896 - -0.7 1,622,951 - CA264_07040 0.10 -2.5 1,622,958 + CA264_07040 0.11 -0.9 1,623,060 - CA264_07040 0.19 -0.7 1,623,063 + CA264_07040 0.19 -0.9 1,623,064 - CA264_07040 0.20 -1.3 1,623,064 - CA264_07040 0.20 -2.0 1,623,064 - CA264_07040 0.20 +0.8 1,623,064 - CA264_07040 0.20 -1.7 1,623,067 + CA264_07040 0.20 +0.1 1,623,067 + CA264_07040 0.20 -0.7 1,623,068 - CA264_07040 0.20 +0.6 1,623,274 - CA264_07040 0.36 -1.4 1,623,327 + CA264_07040 0.41 +0.8 1,623,422 - CA264_07040 0.48 -1.7 1,623,422 - CA264_07040 0.48 +0.8 1,623,422 - CA264_07040 0.48 -0.7 1,623,422 - CA264_07040 0.48 -0.3 1,623,492 + CA264_07040 0.54 -1.2 1,623,571 - CA264_07040 0.60 -0.4 1,623,584 + CA264_07040 0.61 -1.9 1,623,584 + CA264_07040 0.61 -0.2 1,623,628 - CA264_07040 0.65 -0.6 1,623,657 + CA264_07040 0.67 +0.1 1,623,658 - CA264_07040 0.67 -0.9 1,623,659 + CA264_07040 0.67 +0.4 1,623,660 - CA264_07040 0.68 +0.7 1,623,687 + CA264_07040 0.70 -0.7
Or see this region's nucleotide sequence