Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05090 and CA264_05095 are separated by 242 nucleotides CA264_05095 and CA264_05100 are separated by 323 nucleotides CA264_05100 and CA264_05105 overlap by 4 nucleotides
CA264_05090: CA264_05090 - 3-deoxy-7-phosphoheptulonate synthase, at 1,177,957 to 1,178,967
_05090
CA264_05095: CA264_05095 - magnesium transporter, at 1,179,210 to 1,180,553
_05095
CA264_05100: CA264_05100 - imidazole glycerol phosphate synthase subunit HisH, at 1,180,877 to 1,181,458
_05100
CA264_05105: CA264_05105 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase, at 1,181,455 to 1,182,177
_05105
Position (kb)
1179
1180
1181 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1178.221 kb on - strand, within CA264_05090 at 1178.322 kb on - strand, within CA264_05090 at 1178.346 kb on + strand, within CA264_05090 at 1178.355 kb on + strand, within CA264_05090 at 1178.365 kb on + strand, within CA264_05090 at 1178.366 kb on - strand, within CA264_05090 at 1178.412 kb on + strand, within CA264_05090 at 1178.413 kb on - strand, within CA264_05090 at 1178.469 kb on - strand, within CA264_05090 at 1178.480 kb on + strand, within CA264_05090 at 1178.480 kb on + strand, within CA264_05090 at 1178.485 kb on + strand, within CA264_05090 at 1178.485 kb on + strand, within CA264_05090 at 1178.485 kb on + strand, within CA264_05090 at 1178.486 kb on - strand, within CA264_05090 at 1178.625 kb on + strand, within CA264_05090 at 1178.692 kb on + strand, within CA264_05090 at 1178.693 kb on - strand, within CA264_05090 at 1178.760 kb on - strand, within CA264_05090 at 1178.760 kb on - strand, within CA264_05090 at 1178.792 kb on - strand, within CA264_05090 at 1178.795 kb on + strand, within CA264_05090 at 1178.796 kb on - strand, within CA264_05090 at 1178.802 kb on + strand, within CA264_05090 at 1178.970 kb on + strand at 1179.003 kb on + strand at 1179.003 kb on + strand at 1179.004 kb on - strand at 1179.041 kb on + strand at 1179.045 kb on - strand at 1179.085 kb on - strand at 1179.209 kb on + strand at 1179.210 kb on - strand at 1179.360 kb on + strand, within CA264_05095 at 1179.361 kb on - strand, within CA264_05095 at 1179.372 kb on - strand, within CA264_05095 at 1179.450 kb on - strand, within CA264_05095 at 1179.481 kb on + strand, within CA264_05095 at 1179.481 kb on + strand, within CA264_05095 at 1179.482 kb on - strand, within CA264_05095 at 1179.528 kb on - strand, within CA264_05095 at 1179.588 kb on + strand, within CA264_05095 at 1179.588 kb on + strand, within CA264_05095 at 1179.617 kb on + strand, within CA264_05095 at 1179.618 kb on - strand, within CA264_05095 at 1179.679 kb on - strand, within CA264_05095 at 1179.679 kb on - strand, within CA264_05095 at 1179.774 kb on + strand, within CA264_05095 at 1179.830 kb on + strand, within CA264_05095 at 1179.837 kb on + strand, within CA264_05095 at 1179.838 kb on - strand, within CA264_05095 at 1179.887 kb on + strand, within CA264_05095 at 1179.941 kb on + strand, within CA264_05095 at 1179.942 kb on - strand, within CA264_05095 at 1179.981 kb on + strand, within CA264_05095 at 1180.148 kb on + strand, within CA264_05095 at 1180.174 kb on + strand, within CA264_05095 at 1180.181 kb on - strand, within CA264_05095 at 1180.228 kb on + strand, within CA264_05095 at 1180.228 kb on + strand, within CA264_05095 at 1180.229 kb on - strand, within CA264_05095 at 1180.269 kb on - strand, within CA264_05095 at 1180.269 kb on - strand, within CA264_05095 at 1180.270 kb on + strand, within CA264_05095 at 1180.271 kb on - strand, within CA264_05095 at 1180.271 kb on - strand, within CA264_05095 at 1180.271 kb on - strand, within CA264_05095 at 1180.324 kb on - strand, within CA264_05095 at 1180.330 kb on - strand, within CA264_05095 at 1180.358 kb on + strand, within CA264_05095 at 1180.358 kb on + strand, within CA264_05095 at 1180.413 kb on - strand, within CA264_05095 at 1180.455 kb on - strand at 1180.492 kb on + strand at 1180.492 kb on + strand at 1180.492 kb on + strand at 1180.509 kb on + strand at 1180.509 kb on + strand at 1180.565 kb on - strand at 1180.602 kb on + strand at 1180.603 kb on - strand at 1180.604 kb on + strand at 1180.616 kb on + strand at 1180.618 kb on + strand at 1180.618 kb on + strand at 1180.621 kb on - strand at 1180.621 kb on - strand at 1180.621 kb on - strand at 1180.652 kb on + strand at 1180.653 kb on - strand at 1180.713 kb on + strand at 1180.714 kb on - strand at 1180.717 kb on - strand at 1180.718 kb on + strand at 1180.718 kb on + strand at 1180.719 kb on - strand at 1180.726 kb on + strand at 1180.727 kb on - strand at 1180.727 kb on - strand at 1180.727 kb on - strand at 1180.727 kb on - strand at 1180.808 kb on - strand at 1180.884 kb on + strand at 1180.888 kb on + strand at 1180.890 kb on + strand at 1180.891 kb on - strand at 1180.898 kb on + strand at 1180.899 kb on - strand at 1180.962 kb on + strand, within CA264_05100 at 1180.962 kb on + strand, within CA264_05100 at 1180.981 kb on + strand, within CA264_05100 at 1180.984 kb on + strand, within CA264_05100 at 1181.046 kb on + strand, within CA264_05100 at 1181.103 kb on + strand, within CA264_05100 at 1181.103 kb on + strand, within CA264_05100 at 1181.104 kb on - strand, within CA264_05100 at 1181.160 kb on + strand, within CA264_05100 at 1181.167 kb on + strand, within CA264_05100 at 1181.168 kb on - strand, within CA264_05100 at 1181.280 kb on - strand, within CA264_05100 at 1181.280 kb on - strand at 1181.283 kb on + strand, within CA264_05100 at 1181.284 kb on - strand, within CA264_05100 at 1181.284 kb on - strand, within CA264_05100 at 1181.284 kb on - strand, within CA264_05100 at 1181.284 kb on - strand, within CA264_05100 at 1181.284 kb on - strand, within CA264_05100 at 1181.285 kb on + strand, within CA264_05100 at 1181.286 kb on - strand, within CA264_05100 at 1181.288 kb on + strand, within CA264_05100 at 1181.288 kb on + strand, within CA264_05100 at 1181.288 kb on + strand, within CA264_05100 at 1181.288 kb on + strand, within CA264_05100 at 1181.289 kb on - strand, within CA264_05100 at 1181.289 kb on - strand, within CA264_05100 at 1181.289 kb on - strand, within CA264_05100 at 1181.289 kb on - strand, within CA264_05100 at 1181.300 kb on + strand, within CA264_05100 at 1181.304 kb on - strand, within CA264_05100 at 1181.321 kb on + strand, within CA264_05100 at 1181.321 kb on + strand, within CA264_05100 at 1181.323 kb on + strand, within CA264_05100 at 1181.367 kb on + strand, within CA264_05100 at 1181.372 kb on + strand, within CA264_05100 at 1181.437 kb on + strand at 1181.454 kb on + strand at 1181.454 kb on + strand at 1181.454 kb on + strand at 1181.455 kb on - strand at 1181.476 kb on - strand at 1181.476 kb on - strand at 1181.477 kb on + strand at 1181.477 kb on + strand at 1181.478 kb on - strand at 1181.478 kb on - strand at 1181.478 kb on - strand at 1181.478 kb on - strand at 1181.539 kb on + strand, within CA264_05105 at 1181.540 kb on - strand, within CA264_05105
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,178,221 - CA264_05090 0.26 -0.2 1,178,322 - CA264_05090 0.36 -1.0 1,178,346 + CA264_05090 0.38 +2.2 1,178,355 + CA264_05090 0.39 +0.7 1,178,365 + CA264_05090 0.40 +0.6 1,178,366 - CA264_05090 0.40 +0.2 1,178,412 + CA264_05090 0.45 -0.3 1,178,413 - CA264_05090 0.45 -0.1 1,178,469 - CA264_05090 0.51 +0.6 1,178,480 + CA264_05090 0.52 +0.6 1,178,480 + CA264_05090 0.52 -0.3 1,178,485 + CA264_05090 0.52 -0.0 1,178,485 + CA264_05090 0.52 -0.4 1,178,485 + CA264_05090 0.52 -0.5 1,178,486 - CA264_05090 0.52 -0.6 1,178,625 + CA264_05090 0.66 +0.1 1,178,692 + CA264_05090 0.73 -0.1 1,178,693 - CA264_05090 0.73 +0.1 1,178,760 - CA264_05090 0.79 +0.1 1,178,760 - CA264_05090 0.79 +0.8 1,178,792 - CA264_05090 0.83 -1.3 1,178,795 + CA264_05090 0.83 -0.2 1,178,796 - CA264_05090 0.83 -0.4 1,178,802 + CA264_05090 0.84 -0.2 1,178,970 + +0.0 1,179,003 + +1.2 1,179,003 + -0.4 1,179,004 - +0.6 1,179,041 + +1.6 1,179,045 - -0.4 1,179,085 - +0.1 1,179,209 + -0.2 1,179,210 - -0.0 1,179,360 + CA264_05095 0.11 -0.4 1,179,361 - CA264_05095 0.11 -0.8 1,179,372 - CA264_05095 0.12 -1.2 1,179,450 - CA264_05095 0.18 -0.6 1,179,481 + CA264_05095 0.20 -0.8 1,179,481 + CA264_05095 0.20 -0.0 1,179,482 - CA264_05095 0.20 -0.9 1,179,528 - CA264_05095 0.24 +0.1 1,179,588 + CA264_05095 0.28 -0.5 1,179,588 + CA264_05095 0.28 -0.3 1,179,617 + CA264_05095 0.30 +1.0 1,179,618 - CA264_05095 0.30 -0.1 1,179,679 - CA264_05095 0.35 -0.4 1,179,679 - CA264_05095 0.35 +0.3 1,179,774 + CA264_05095 0.42 -0.1 1,179,830 + CA264_05095 0.46 +0.6 1,179,837 + CA264_05095 0.47 -0.1 1,179,838 - CA264_05095 0.47 +0.9 1,179,887 + CA264_05095 0.50 -1.6 1,179,941 + CA264_05095 0.54 -1.4 1,179,942 - CA264_05095 0.54 -0.2 1,179,981 + CA264_05095 0.57 +0.2 1,180,148 + CA264_05095 0.70 -0.7 1,180,174 + CA264_05095 0.72 -0.0 1,180,181 - CA264_05095 0.72 -1.1 1,180,228 + CA264_05095 0.76 +0.2 1,180,228 + CA264_05095 0.76 -1.3 1,180,229 - CA264_05095 0.76 +1.0 1,180,269 - CA264_05095 0.79 -0.6 1,180,269 - CA264_05095 0.79 -0.4 1,180,270 + CA264_05095 0.79 +0.4 1,180,271 - CA264_05095 0.79 -0.1 1,180,271 - CA264_05095 0.79 -0.6 1,180,271 - CA264_05095 0.79 +0.1 1,180,324 - CA264_05095 0.83 -0.1 1,180,330 - CA264_05095 0.83 -0.7 1,180,358 + CA264_05095 0.85 -0.8 1,180,358 + CA264_05095 0.85 -0.6 1,180,413 - CA264_05095 0.90 -1.0 1,180,455 - -0.7 1,180,492 + -0.4 1,180,492 + -0.3 1,180,492 + -0.1 1,180,509 + -0.6 1,180,509 + -0.5 1,180,565 - +1.5 1,180,602 + -0.2 1,180,603 - +0.4 1,180,604 + -0.3 1,180,616 + -0.5 1,180,618 + -0.6 1,180,618 + -1.1 1,180,621 - +0.1 1,180,621 - -0.2 1,180,621 - -0.3 1,180,652 + -1.4 1,180,653 - +0.2 1,180,713 + +0.5 1,180,714 - +0.5 1,180,717 - +0.2 1,180,718 + -0.1 1,180,718 + +0.1 1,180,719 - +0.9 1,180,726 + -0.0 1,180,727 - +1.0 1,180,727 - -0.5 1,180,727 - +0.1 1,180,727 - -0.1 1,180,808 - -0.1 1,180,884 + -1.5 1,180,888 + +0.1 1,180,890 + -0.5 1,180,891 - -0.3 1,180,898 + -0.5 1,180,899 - +0.5 1,180,962 + CA264_05100 0.15 -1.5 1,180,962 + CA264_05100 0.15 +1.2 1,180,981 + CA264_05100 0.18 -0.6 1,180,984 + CA264_05100 0.18 -0.4 1,181,046 + CA264_05100 0.29 +0.3 1,181,103 + CA264_05100 0.39 -0.4 1,181,103 + CA264_05100 0.39 +0.3 1,181,104 - CA264_05100 0.39 -1.3 1,181,160 + CA264_05100 0.49 -1.6 1,181,167 + CA264_05100 0.50 -0.4 1,181,168 - CA264_05100 0.50 +0.0 1,181,280 - CA264_05100 0.69 +0.1 1,181,280 - +0.6 1,181,283 + CA264_05100 0.70 -0.6 1,181,284 - CA264_05100 0.70 -0.2 1,181,284 - CA264_05100 0.70 -0.9 1,181,284 - CA264_05100 0.70 -0.4 1,181,284 - CA264_05100 0.70 -0.0 1,181,284 - CA264_05100 0.70 -0.5 1,181,285 + CA264_05100 0.70 +0.1 1,181,286 - CA264_05100 0.70 -0.1 1,181,288 + CA264_05100 0.71 -0.5 1,181,288 + CA264_05100 0.71 -0.0 1,181,288 + CA264_05100 0.71 +0.0 1,181,288 + CA264_05100 0.71 -0.3 1,181,289 - CA264_05100 0.71 +0.1 1,181,289 - CA264_05100 0.71 -0.9 1,181,289 - CA264_05100 0.71 -0.5 1,181,289 - CA264_05100 0.71 -1.2 1,181,300 + CA264_05100 0.73 -1.9 1,181,304 - CA264_05100 0.73 -0.3 1,181,321 + CA264_05100 0.76 +0.8 1,181,321 + CA264_05100 0.76 -0.1 1,181,323 + CA264_05100 0.77 -1.4 1,181,367 + CA264_05100 0.84 -0.4 1,181,372 + CA264_05100 0.85 +0.0 1,181,437 + +0.1 1,181,454 + -0.3 1,181,454 + -0.5 1,181,454 + +0.2 1,181,455 - -0.8 1,181,476 - -1.2 1,181,476 - -0.5 1,181,477 + -1.1 1,181,477 + +0.0 1,181,478 - -0.4 1,181,478 - +0.1 1,181,478 - +0.3 1,181,478 - -1.0 1,181,539 + CA264_05105 0.12 -1.6 1,181,540 - CA264_05105 0.12 -0.5
Or see this region's nucleotide sequence