Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04350 and CA264_04355 are separated by 237 nucleotides CA264_04355 and CA264_04360 are separated by 195 nucleotides
CA264_04350: CA264_04350 - alanine dehydrogenase, at 1,006,390 to 1,007,502
_04350
CA264_04355: CA264_04355 - hypothetical protein, at 1,007,740 to 1,008,525
_04355
CA264_04360: CA264_04360 - transketolase, at 1,008,721 to 1,011,129
_04360
Position (kb)
1007
1008
1009 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1006.836 kb on - strand, within CA264_04350 at 1007.060 kb on + strand, within CA264_04350 at 1007.259 kb on - strand, within CA264_04350 at 1007.259 kb on - strand, within CA264_04350 at 1007.335 kb on - strand, within CA264_04350 at 1007.335 kb on - strand, within CA264_04350 at 1007.337 kb on + strand, within CA264_04350 at 1007.354 kb on + strand, within CA264_04350 at 1007.398 kb on + strand at 1007.399 kb on - strand at 1007.497 kb on + strand at 1007.539 kb on - strand at 1007.559 kb on - strand at 1007.559 kb on - strand at 1007.572 kb on - strand at 1007.598 kb on - strand at 1007.675 kb on + strand at 1007.677 kb on + strand at 1007.677 kb on + strand at 1007.678 kb on - strand at 1007.714 kb on - strand at 1007.800 kb on + strand at 1007.801 kb on + strand at 1007.803 kb on + strand at 1007.803 kb on + strand at 1007.804 kb on - strand at 1007.804 kb on - strand at 1007.844 kb on + strand, within CA264_04355 at 1007.844 kb on + strand, within CA264_04355 at 1007.845 kb on - strand, within CA264_04355 at 1007.884 kb on + strand, within CA264_04355 at 1007.900 kb on + strand, within CA264_04355 at 1007.901 kb on - strand, within CA264_04355 at 1007.905 kb on + strand, within CA264_04355 at 1007.905 kb on + strand, within CA264_04355 at 1007.905 kb on + strand, within CA264_04355 at 1007.905 kb on + strand, within CA264_04355 at 1007.905 kb on + strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.957 kb on + strand, within CA264_04355 at 1007.961 kb on + strand, within CA264_04355 at 1007.962 kb on - strand, within CA264_04355 at 1008.127 kb on - strand, within CA264_04355 at 1008.128 kb on + strand, within CA264_04355 at 1008.129 kb on - strand, within CA264_04355 at 1008.129 kb on - strand, within CA264_04355 at 1008.199 kb on - strand, within CA264_04355 at 1008.254 kb on + strand, within CA264_04355 at 1008.385 kb on + strand, within CA264_04355 at 1008.386 kb on - strand, within CA264_04355 at 1008.386 kb on - strand, within CA264_04355 at 1008.389 kb on + strand, within CA264_04355 at 1008.389 kb on + strand, within CA264_04355 at 1008.389 kb on + strand, within CA264_04355 at 1008.390 kb on - strand, within CA264_04355 at 1008.393 kb on + strand, within CA264_04355 at 1008.418 kb on - strand, within CA264_04355 at 1008.484 kb on + strand at 1008.494 kb on - strand at 1008.497 kb on - strand at 1008.497 kb on - strand at 1008.497 kb on - strand at 1008.510 kb on - strand at 1008.556 kb on - strand at 1008.556 kb on - strand at 1008.556 kb on - strand at 1008.566 kb on - strand at 1008.567 kb on + strand at 1008.568 kb on - strand at 1008.609 kb on + strand at 1008.609 kb on + strand at 1008.609 kb on + strand at 1008.610 kb on - strand at 1008.708 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 1,006,836 - CA264_04350 0.40 -0.1 1,007,060 + CA264_04350 0.60 +0.6 1,007,259 - CA264_04350 0.78 -1.4 1,007,259 - CA264_04350 0.78 -0.2 1,007,335 - CA264_04350 0.85 +0.1 1,007,335 - CA264_04350 0.85 -0.2 1,007,337 + CA264_04350 0.85 +1.0 1,007,354 + CA264_04350 0.87 -0.3 1,007,398 + -1.0 1,007,399 - +0.8 1,007,497 + -1.7 1,007,539 - +0.2 1,007,559 - +0.3 1,007,559 - +1.7 1,007,572 - -0.3 1,007,598 - +1.7 1,007,675 + -0.1 1,007,677 + -0.1 1,007,677 + -0.2 1,007,678 - +0.6 1,007,714 - -0.4 1,007,800 + +0.0 1,007,801 + +0.2 1,007,803 + +0.4 1,007,803 + -0.3 1,007,804 - -0.8 1,007,804 - -1.1 1,007,844 + CA264_04355 0.13 -0.1 1,007,844 + CA264_04355 0.13 -0.9 1,007,845 - CA264_04355 0.13 -0.3 1,007,884 + CA264_04355 0.18 -0.2 1,007,900 + CA264_04355 0.20 +0.1 1,007,901 - CA264_04355 0.20 -0.3 1,007,905 + CA264_04355 0.21 -0.8 1,007,905 + CA264_04355 0.21 -2.5 1,007,905 + CA264_04355 0.21 -1.0 1,007,905 + CA264_04355 0.21 -0.3 1,007,905 + CA264_04355 0.21 +0.6 1,007,906 - CA264_04355 0.21 -0.6 1,007,906 - CA264_04355 0.21 -1.2 1,007,906 - CA264_04355 0.21 +1.4 1,007,906 - CA264_04355 0.21 -0.6 1,007,906 - CA264_04355 0.21 -0.5 1,007,906 - CA264_04355 0.21 -0.2 1,007,957 + CA264_04355 0.28 -0.4 1,007,961 + CA264_04355 0.28 -0.6 1,007,962 - CA264_04355 0.28 -0.9 1,008,127 - CA264_04355 0.49 -0.6 1,008,128 + CA264_04355 0.49 +0.4 1,008,129 - CA264_04355 0.49 -1.8 1,008,129 - CA264_04355 0.49 -0.7 1,008,199 - CA264_04355 0.58 -0.8 1,008,254 + CA264_04355 0.65 -1.2 1,008,385 + CA264_04355 0.82 -0.9 1,008,386 - CA264_04355 0.82 -0.2 1,008,386 - CA264_04355 0.82 -0.3 1,008,389 + CA264_04355 0.83 -1.7 1,008,389 + CA264_04355 0.83 -0.1 1,008,389 + CA264_04355 0.83 +1.7 1,008,390 - CA264_04355 0.83 -2.1 1,008,393 + CA264_04355 0.83 -1.0 1,008,418 - CA264_04355 0.86 -0.2 1,008,484 + -0.2 1,008,494 - -0.1 1,008,497 - -0.8 1,008,497 - -0.2 1,008,497 - +3.1 1,008,510 - +0.7 1,008,556 - -1.2 1,008,556 - -0.8 1,008,556 - -0.5 1,008,566 - -0.6 1,008,567 + +0.2 1,008,568 - -0.8 1,008,609 + -0.1 1,008,609 + -1.0 1,008,609 + -0.6 1,008,610 - -1.1 1,008,708 + -0.2
Or see this region's nucleotide sequence