Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02015 and CA264_02020 are separated by 144 nucleotides CA264_02020 and CA264_02025 are separated by 302 nucleotides CA264_02025 and CA264_02030 are separated by 22 nucleotides
CA264_02015: CA264_02015 - thiamine-phosphate kinase, at 463,647 to 464,672
_02015
CA264_02020: CA264_02020 - histidinol-phosphate transaminase, at 464,817 to 466,964
_02020
CA264_02025: CA264_02025 - nitroreductase, at 467,267 to 467,851
_02025
CA264_02030: CA264_02030 - hypothetical protein, at 467,874 to 468,587
_02030
Position (kb)
464
465
466
467 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 464.672 kb on + strand at 464.676 kb on + strand at 464.677 kb on - strand at 464.677 kb on - strand at 464.793 kb on + strand at 464.819 kb on - strand at 464.819 kb on - strand at 464.925 kb on + strand at 464.925 kb on + strand at 465.082 kb on - strand, within CA264_02020 at 465.140 kb on - strand, within CA264_02020 at 465.140 kb on - strand, within CA264_02020 at 465.366 kb on + strand, within CA264_02020 at 465.366 kb on + strand, within CA264_02020 at 465.367 kb on - strand, within CA264_02020 at 465.398 kb on - strand, within CA264_02020 at 465.435 kb on + strand, within CA264_02020 at 465.436 kb on - strand, within CA264_02020 at 465.436 kb on - strand, within CA264_02020 at 465.436 kb on - strand, within CA264_02020 at 465.510 kb on - strand, within CA264_02020 at 465.592 kb on - strand, within CA264_02020 at 465.600 kb on + strand, within CA264_02020 at 465.734 kb on - strand, within CA264_02020 at 465.793 kb on + strand, within CA264_02020 at 465.960 kb on + strand, within CA264_02020 at 465.960 kb on + strand, within CA264_02020 at 465.963 kb on - strand, within CA264_02020 at 466.097 kb on + strand, within CA264_02020 at 466.161 kb on + strand, within CA264_02020 at 466.161 kb on + strand, within CA264_02020 at 466.293 kb on + strand, within CA264_02020 at 466.328 kb on - strand, within CA264_02020 at 466.354 kb on + strand, within CA264_02020 at 466.380 kb on + strand, within CA264_02020 at 466.380 kb on + strand, within CA264_02020 at 466.406 kb on - strand, within CA264_02020 at 466.450 kb on + strand, within CA264_02020 at 466.450 kb on + strand, within CA264_02020 at 466.471 kb on - strand, within CA264_02020 at 466.516 kb on + strand, within CA264_02020 at 466.525 kb on + strand, within CA264_02020 at 466.526 kb on - strand, within CA264_02020 at 466.616 kb on - strand, within CA264_02020 at 466.675 kb on + strand, within CA264_02020 at 466.852 kb on + strand at 466.869 kb on + strand at 466.915 kb on - strand at 466.987 kb on + strand at 466.994 kb on + strand at 467.024 kb on + strand at 467.025 kb on - strand at 467.025 kb on - strand at 467.027 kb on + strand at 467.027 kb on + strand at 467.028 kb on - strand at 467.028 kb on - strand at 467.033 kb on + strand at 467.034 kb on - strand at 467.034 kb on - strand at 467.034 kb on - strand at 467.038 kb on - strand at 467.038 kb on - strand at 467.043 kb on + strand at 467.043 kb on + strand at 467.044 kb on - strand at 467.047 kb on + strand at 467.047 kb on + strand at 467.207 kb on + strand at 467.242 kb on - strand at 467.288 kb on - strand at 467.432 kb on - strand, within CA264_02025 at 467.435 kb on + strand, within CA264_02025 at 467.436 kb on - strand, within CA264_02025 at 467.476 kb on + strand, within CA264_02025 at 467.476 kb on + strand, within CA264_02025 at 467.549 kb on + strand, within CA264_02025 at 467.550 kb on - strand, within CA264_02025 at 467.613 kb on + strand, within CA264_02025 at 467.647 kb on - strand, within CA264_02025 at 467.739 kb on - strand, within CA264_02025 at 467.849 kb on + strand at 467.849 kb on + strand at 467.852 kb on + strand at 467.853 kb on - strand at 467.853 kb on - strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.873 kb on + strand at 467.874 kb on - strand at 467.874 kb on - strand at 467.887 kb on + strand at 467.888 kb on - strand at 467.894 kb on + strand at 467.895 kb on - strand at 467.945 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 464,672 + +1.0 464,676 + -0.7 464,677 - +0.1 464,677 - +0.7 464,793 + +0.2 464,819 - -0.0 464,819 - +0.4 464,925 + +0.5 464,925 + +0.1 465,082 - CA264_02020 0.12 -0.5 465,140 - CA264_02020 0.15 -1.9 465,140 - CA264_02020 0.15 -0.1 465,366 + CA264_02020 0.26 +0.2 465,366 + CA264_02020 0.26 +1.3 465,367 - CA264_02020 0.26 -0.6 465,398 - CA264_02020 0.27 -0.7 465,435 + CA264_02020 0.29 -0.4 465,436 - CA264_02020 0.29 -0.1 465,436 - CA264_02020 0.29 +0.4 465,436 - CA264_02020 0.29 -0.5 465,510 - CA264_02020 0.32 -0.8 465,592 - CA264_02020 0.36 -0.6 465,600 + CA264_02020 0.36 -0.0 465,734 - CA264_02020 0.43 -0.3 465,793 + CA264_02020 0.45 -1.2 465,960 + CA264_02020 0.53 +0.6 465,960 + CA264_02020 0.53 -0.8 465,963 - CA264_02020 0.53 -1.5 466,097 + CA264_02020 0.60 -0.3 466,161 + CA264_02020 0.63 -0.7 466,161 + CA264_02020 0.63 -0.4 466,293 + CA264_02020 0.69 +0.9 466,328 - CA264_02020 0.70 -1.4 466,354 + CA264_02020 0.72 +1.1 466,380 + CA264_02020 0.73 -0.0 466,380 + CA264_02020 0.73 -1.1 466,406 - CA264_02020 0.74 -1.1 466,450 + CA264_02020 0.76 -0.0 466,450 + CA264_02020 0.76 -0.1 466,471 - CA264_02020 0.77 -0.1 466,516 + CA264_02020 0.79 -0.9 466,525 + CA264_02020 0.80 +0.1 466,526 - CA264_02020 0.80 -1.0 466,616 - CA264_02020 0.84 +0.2 466,675 + CA264_02020 0.86 -0.5 466,852 + -0.5 466,869 + -0.7 466,915 - -0.1 466,987 + +1.6 466,994 + -0.0 467,024 + +0.3 467,025 - +0.4 467,025 - +0.1 467,027 + +0.5 467,027 + +0.3 467,028 - +1.1 467,028 - +0.8 467,033 + +1.5 467,034 - +1.5 467,034 - +0.7 467,034 - +0.4 467,038 - +0.6 467,038 - +1.1 467,043 + +0.7 467,043 + -0.0 467,044 - +1.2 467,047 + +0.6 467,047 + +0.2 467,207 + +1.6 467,242 - +2.1 467,288 - +1.7 467,432 - CA264_02025 0.28 +2.2 467,435 + CA264_02025 0.29 +1.2 467,436 - CA264_02025 0.29 +1.9 467,476 + CA264_02025 0.36 +1.0 467,476 + CA264_02025 0.36 -0.5 467,549 + CA264_02025 0.48 +1.0 467,550 - CA264_02025 0.48 +1.5 467,613 + CA264_02025 0.59 +0.5 467,647 - CA264_02025 0.65 +2.0 467,739 - CA264_02025 0.81 +1.8 467,849 + +0.3 467,849 + +2.3 467,852 + +0.1 467,853 - +1.2 467,853 - +1.5 467,873 + +0.1 467,873 + +0.5 467,873 + +0.2 467,873 + +1.1 467,873 + +0.2 467,873 + +1.1 467,873 + +0.2 467,873 + +0.5 467,873 + +0.3 467,874 - -1.0 467,874 - +1.7 467,887 + +1.2 467,888 - +1.7 467,894 + +0.3 467,895 - +2.1 467,945 + +0.3
Or see this region's nucleotide sequence