Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_01570

Experiment: m.b. Cobalt chloride 0.3 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_01565 and CA264_01570 are separated by 223 nucleotidesCA264_01570 and CA264_01575 are separated by 17 nucleotides CA264_01565: CA264_01565 - tellurium resistance protein TerC, at 369,749 to 370,690 _01565 CA264_01570: CA264_01570 - dolichyl-phosphate beta-D-mannosyltransferase, at 370,914 to 371,648 _01570 CA264_01575: CA264_01575 - protoporphyrinogen oxidase, at 371,666 to 373,012 _01575 Position (kb) 370 371 372Strain fitness (log2 ratio) -1 0 1 2 3at 369.949 kb on + strand, within CA264_01565at 369.969 kb on + strand, within CA264_01565at 369.969 kb on + strand, within CA264_01565at 369.969 kb on + strand, within CA264_01565at 370.011 kb on + strand, within CA264_01565at 370.226 kb on + strand, within CA264_01565at 370.267 kb on + strand, within CA264_01565at 370.268 kb on - strand, within CA264_01565at 370.293 kb on + strand, within CA264_01565at 370.293 kb on + strand, within CA264_01565at 370.294 kb on - strand, within CA264_01565at 370.300 kb on + strand, within CA264_01565at 370.300 kb on + strand, within CA264_01565at 370.300 kb on + strand, within CA264_01565at 370.301 kb on - strand, within CA264_01565at 370.301 kb on - strand, within CA264_01565at 370.325 kb on + strand, within CA264_01565at 370.325 kb on + strand, within CA264_01565at 370.332 kb on - strand, within CA264_01565at 370.338 kb on - strand, within CA264_01565at 370.454 kb on + strand, within CA264_01565at 370.691 kb on - strandat 370.734 kb on + strandat 370.734 kb on + strandat 370.734 kb on + strandat 370.735 kb on - strandat 370.735 kb on - strandat 370.737 kb on - strandat 370.737 kb on - strandat 370.737 kb on - strandat 370.737 kb on - strandat 370.737 kb on - strandat 370.739 kb on + strandat 370.740 kb on - strandat 370.740 kb on - strandat 370.760 kb on - strandat 370.900 kb on + strandat 370.900 kb on + strandat 370.916 kb on - strandat 371.657 kb on + strandat 371.658 kb on - strandat 371.663 kb on + strandat 371.664 kb on - strandat 371.672 kb on - strandat 371.705 kb on - strandat 371.936 kb on - strand, within CA264_01575at 371.995 kb on + strand, within CA264_01575at 372.002 kb on + strand, within CA264_01575at 372.132 kb on + strand, within CA264_01575at 372.132 kb on + strand, within CA264_01575at 372.132 kb on + strand, within CA264_01575at 372.133 kb on - strand, within CA264_01575at 372.133 kb on - strand, within CA264_01575at 372.133 kb on - strand, within CA264_01575at 372.133 kb on - strand, within CA264_01575at 372.133 kb on - strand, within CA264_01575at 372.203 kb on - strand, within CA264_01575at 372.203 kb on - strand, within CA264_01575at 372.204 kb on + strand, within CA264_01575at 372.205 kb on - strand, within CA264_01575at 372.258 kb on + strand, within CA264_01575at 372.259 kb on - strand, within CA264_01575at 372.388 kb on + strand, within CA264_01575at 372.388 kb on + strand, within CA264_01575at 372.388 kb on + strand, within CA264_01575at 372.389 kb on - strand, within CA264_01575at 372.389 kb on - strand, within CA264_01575at 372.389 kb on - strand, within CA264_01575at 372.389 kb on - strand, within CA264_01575at 372.471 kb on + strand, within CA264_01575at 372.564 kb on - strand, within CA264_01575at 372.624 kb on + strand, within CA264_01575at 372.625 kb on - strand, within CA264_01575

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM
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369,949 + CA264_01565 0.21 -0.2
369,969 + CA264_01565 0.23 +0.4
369,969 + CA264_01565 0.23 +3.7
369,969 + CA264_01565 0.23 +0.8
370,011 + CA264_01565 0.28 +0.3
370,226 + CA264_01565 0.51 +0.3
370,267 + CA264_01565 0.55 +0.3
370,268 - CA264_01565 0.55 -0.6
370,293 + CA264_01565 0.58 +0.3
370,293 + CA264_01565 0.58 -0.7
370,294 - CA264_01565 0.58 -1.1
370,300 + CA264_01565 0.58 +0.2
370,300 + CA264_01565 0.58 +0.0
370,300 + CA264_01565 0.58 -0.5
370,301 - CA264_01565 0.59 -0.3
370,301 - CA264_01565 0.59 -0.2
370,325 + CA264_01565 0.61 -0.9
370,325 + CA264_01565 0.61 -0.2
370,332 - CA264_01565 0.62 +0.0
370,338 - CA264_01565 0.63 -0.7
370,454 + CA264_01565 0.75 +0.3
370,691 - -0.3
370,734 + -0.9
370,734 + +1.6
370,734 + -0.3
370,735 - +0.7
370,735 - -0.4
370,737 - -0.6
370,737 - -0.2
370,737 - -0.5
370,737 - -0.6
370,737 - -0.7
370,739 + -1.5
370,740 - -0.5
370,740 - -0.1
370,760 - -0.7
370,900 + +0.3
370,900 + -0.1
370,916 - -1.2
371,657 + -0.4
371,658 - -0.8
371,663 + +0.2
371,664 - -0.5
371,672 - -0.7
371,705 - -0.3
371,936 - CA264_01575 0.20 -0.9
371,995 + CA264_01575 0.24 -0.5
372,002 + CA264_01575 0.25 +0.0
372,132 + CA264_01575 0.35 -1.2
372,132 + CA264_01575 0.35 -0.2
372,132 + CA264_01575 0.35 -0.3
372,133 - CA264_01575 0.35 -0.8
372,133 - CA264_01575 0.35 -0.8
372,133 - CA264_01575 0.35 +0.7
372,133 - CA264_01575 0.35 -1.0
372,133 - CA264_01575 0.35 -0.5
372,203 - CA264_01575 0.40 -0.2
372,203 - CA264_01575 0.40 -1.5
372,204 + CA264_01575 0.40 -0.5
372,205 - CA264_01575 0.40 +0.0
372,258 + CA264_01575 0.44 -0.1
372,259 - CA264_01575 0.44 +0.2
372,388 + CA264_01575 0.54 +0.2
372,388 + CA264_01575 0.54 -0.2
372,388 + CA264_01575 0.54 +0.0
372,389 - CA264_01575 0.54 +0.2
372,389 - CA264_01575 0.54 +0.3
372,389 - CA264_01575 0.54 +0.2
372,389 - CA264_01575 0.54 -0.1
372,471 + CA264_01575 0.60 +0.3
372,564 - CA264_01575 0.67 +0.3
372,624 + CA264_01575 0.71 +0.1
372,625 - CA264_01575 0.71 +0.0

Or see this region's nucleotide sequence