Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01245 and CA264_01250 are separated by 125 nucleotides CA264_01250 and CA264_01255 are separated by 177 nucleotides
CA264_01245: CA264_01245 - serine hydrolase, at 295,349 to 296,530
_01245
CA264_01250: CA264_01250 - amidohydrolase, at 296,656 to 299,955
_01250
CA264_01255: CA264_01255 - thioredoxin domain-containing protein, at 300,133 to 302,196
_01255
Position (kb) 296
297
298
299
300 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 295.677 kb on - strand, within CA264_01245 at 295.677 kb on - strand, within CA264_01245 at 295.677 kb on - strand, within CA264_01245 at 295.684 kb on - strand, within CA264_01245 at 295.721 kb on + strand, within CA264_01245 at 295.721 kb on + strand, within CA264_01245 at 295.721 kb on + strand, within CA264_01245 at 295.722 kb on - strand, within CA264_01245 at 295.753 kb on - strand, within CA264_01245 at 295.811 kb on + strand, within CA264_01245 at 295.812 kb on - strand, within CA264_01245 at 295.812 kb on - strand, within CA264_01245 at 295.843 kb on + strand, within CA264_01245 at 295.855 kb on + strand, within CA264_01245 at 295.926 kb on + strand, within CA264_01245 at 295.930 kb on + strand, within CA264_01245 at 295.971 kb on + strand, within CA264_01245 at 295.971 kb on + strand, within CA264_01245 at 296.342 kb on + strand, within CA264_01245 at 296.390 kb on - strand, within CA264_01245 at 296.400 kb on - strand, within CA264_01245 at 296.452 kb on + strand at 296.453 kb on - strand at 296.454 kb on + strand at 296.454 kb on + strand at 296.454 kb on + strand at 296.455 kb on - strand at 296.455 kb on - strand at 296.459 kb on - strand at 296.459 kb on - strand at 296.460 kb on + strand at 296.460 kb on + strand at 296.461 kb on - strand at 296.520 kb on + strand at 296.520 kb on + strand at 296.564 kb on + strand at 296.588 kb on - strand at 296.639 kb on + strand at 296.646 kb on + strand at 296.738 kb on + strand at 296.738 kb on + strand at 296.738 kb on + strand at 296.739 kb on - strand at 296.739 kb on - strand at 296.739 kb on - strand at 296.775 kb on + strand at 296.780 kb on + strand at 296.780 kb on + strand at 296.788 kb on + strand at 296.837 kb on + strand at 296.838 kb on - strand at 296.949 kb on - strand at 296.977 kb on + strand at 296.978 kb on - strand at 297.183 kb on + strand, within CA264_01250 at 297.196 kb on - strand, within CA264_01250 at 297.245 kb on + strand, within CA264_01250 at 297.246 kb on + strand, within CA264_01250 at 297.248 kb on + strand, within CA264_01250 at 297.270 kb on - strand, within CA264_01250 at 297.286 kb on - strand, within CA264_01250 at 297.336 kb on - strand, within CA264_01250 at 297.337 kb on + strand, within CA264_01250 at 297.352 kb on + strand, within CA264_01250 at 297.385 kb on + strand, within CA264_01250 at 297.498 kb on - strand, within CA264_01250 at 297.635 kb on - strand, within CA264_01250 at 297.719 kb on + strand, within CA264_01250 at 297.720 kb on - strand, within CA264_01250 at 297.720 kb on - strand, within CA264_01250 at 297.734 kb on + strand, within CA264_01250 at 297.735 kb on - strand, within CA264_01250 at 297.737 kb on + strand, within CA264_01250 at 297.737 kb on + strand, within CA264_01250 at 297.781 kb on + strand, within CA264_01250 at 297.782 kb on - strand, within CA264_01250 at 297.799 kb on + strand, within CA264_01250 at 297.919 kb on + strand, within CA264_01250 at 297.919 kb on + strand, within CA264_01250 at 297.920 kb on - strand, within CA264_01250 at 297.920 kb on - strand, within CA264_01250 at 297.920 kb on - strand, within CA264_01250 at 297.923 kb on - strand, within CA264_01250 at 297.923 kb on - strand, within CA264_01250 at 297.923 kb on - strand, within CA264_01250 at 297.942 kb on + strand, within CA264_01250 at 297.943 kb on - strand, within CA264_01250 at 298.015 kb on - strand, within CA264_01250 at 298.094 kb on + strand, within CA264_01250 at 298.094 kb on + strand, within CA264_01250 at 298.095 kb on - strand, within CA264_01250 at 298.095 kb on - strand, within CA264_01250 at 298.270 kb on + strand, within CA264_01250 at 298.296 kb on - strand, within CA264_01250 at 298.310 kb on + strand, within CA264_01250 at 298.320 kb on + strand, within CA264_01250 at 298.320 kb on + strand, within CA264_01250 at 298.320 kb on + strand, within CA264_01250 at 298.320 kb on + strand, within CA264_01250 at 298.320 kb on + strand, within CA264_01250 at 298.320 kb on + strand, within CA264_01250 at 298.370 kb on + strand, within CA264_01250 at 298.370 kb on + strand, within CA264_01250 at 298.479 kb on + strand, within CA264_01250 at 298.479 kb on + strand, within CA264_01250 at 298.480 kb on - strand, within CA264_01250 at 298.480 kb on - strand, within CA264_01250 at 298.481 kb on + strand, within CA264_01250 at 298.481 kb on + strand, within CA264_01250 at 298.481 kb on + strand, within CA264_01250 at 298.481 kb on + strand, within CA264_01250 at 298.482 kb on - strand, within CA264_01250 at 298.482 kb on - strand, within CA264_01250 at 298.482 kb on - strand, within CA264_01250 at 298.482 kb on - strand, within CA264_01250 at 298.484 kb on + strand, within CA264_01250 at 298.485 kb on - strand, within CA264_01250 at 298.485 kb on - strand, within CA264_01250 at 298.485 kb on - strand, within CA264_01250 at 298.545 kb on - strand, within CA264_01250 at 298.553 kb on + strand, within CA264_01250 at 298.553 kb on + strand, within CA264_01250 at 298.554 kb on - strand, within CA264_01250 at 298.554 kb on - strand, within CA264_01250 at 298.575 kb on + strand, within CA264_01250 at 298.576 kb on - strand, within CA264_01250 at 298.576 kb on - strand, within CA264_01250 at 298.576 kb on - strand, within CA264_01250 at 298.576 kb on - strand, within CA264_01250 at 298.584 kb on + strand, within CA264_01250 at 298.649 kb on + strand, within CA264_01250 at 298.649 kb on + strand, within CA264_01250 at 298.685 kb on + strand, within CA264_01250 at 298.722 kb on - strand, within CA264_01250 at 298.784 kb on + strand, within CA264_01250 at 298.784 kb on + strand, within CA264_01250 at 298.785 kb on - strand, within CA264_01250 at 298.785 kb on - strand, within CA264_01250 at 298.922 kb on + strand, within CA264_01250 at 298.922 kb on + strand, within CA264_01250 at 298.923 kb on - strand, within CA264_01250 at 298.973 kb on - strand, within CA264_01250 at 299.234 kb on - strand, within CA264_01250 at 299.305 kb on - strand, within CA264_01250 at 299.307 kb on - strand, within CA264_01250 at 299.343 kb on - strand, within CA264_01250 at 299.345 kb on + strand, within CA264_01250 at 299.345 kb on + strand, within CA264_01250 at 299.346 kb on - strand, within CA264_01250 at 299.346 kb on - strand, within CA264_01250 at 299.346 kb on - strand, within CA264_01250 at 299.346 kb on - strand, within CA264_01250 at 299.346 kb on - strand, within CA264_01250 at 299.351 kb on + strand, within CA264_01250 at 299.351 kb on + strand, within CA264_01250 at 299.352 kb on - strand, within CA264_01250 at 299.444 kb on + strand, within CA264_01250 at 299.445 kb on - strand, within CA264_01250 at 299.445 kb on - strand, within CA264_01250 at 299.507 kb on + strand, within CA264_01250 at 299.562 kb on + strand, within CA264_01250 at 299.631 kb on + strand at 299.732 kb on + strand at 299.733 kb on - strand at 299.733 kb on - strand at 299.733 kb on - strand at 299.733 kb on - strand at 299.785 kb on + strand at 299.799 kb on + strand at 299.800 kb on - strand at 299.800 kb on - strand at 299.929 kb on + strand at 299.930 kb on - strand at 299.931 kb on + strand at 299.932 kb on - strand at 299.940 kb on - strand at 299.960 kb on - strand at 299.972 kb on - strand at 299.988 kb on + strand at 299.989 kb on - strand at 300.001 kb on + strand at 300.043 kb on + strand at 300.043 kb on + strand at 300.075 kb on - strand at 300.092 kb on + strand at 300.092 kb on + strand at 300.092 kb on + strand at 300.093 kb on - strand at 300.093 kb on - strand at 300.093 kb on - strand at 300.096 kb on + strand at 300.109 kb on - strand at 300.128 kb on + strand at 300.134 kb on + strand at 300.135 kb on - strand at 300.172 kb on + strand at 300.236 kb on + strand at 300.236 kb on + strand at 300.236 kb on + strand at 300.236 kb on + strand at 300.237 kb on - strand at 300.402 kb on + strand, within CA264_01255 at 300.402 kb on + strand, within CA264_01255 at 300.402 kb on + strand, within CA264_01255 at 300.403 kb on - strand, within CA264_01255 at 300.403 kb on - strand, within CA264_01255 at 300.521 kb on + strand, within CA264_01255 at 300.522 kb on - strand, within CA264_01255 at 300.522 kb on - strand, within CA264_01255 at 300.543 kb on + strand, within CA264_01255 at 300.544 kb on - strand, within CA264_01255 at 300.635 kb on + strand, within CA264_01255 at 300.654 kb on + strand, within CA264_01255 at 300.678 kb on - strand, within CA264_01255 at 300.732 kb on - strand, within CA264_01255 at 300.806 kb on + strand, within CA264_01255 at 300.807 kb on - strand, within CA264_01255 at 300.840 kb on + strand, within CA264_01255 at 300.841 kb on - strand, within CA264_01255 at 300.903 kb on - strand, within CA264_01255 at 300.906 kb on - strand, within CA264_01255
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 295,677 - CA264_01245 0.28 -0.2 295,677 - CA264_01245 0.28 -0.3 295,677 - CA264_01245 0.28 -0.0 295,684 - CA264_01245 0.28 +0.6 295,721 + CA264_01245 0.31 +0.1 295,721 + CA264_01245 0.31 +0.5 295,721 + CA264_01245 0.31 +0.2 295,722 - CA264_01245 0.32 -0.1 295,753 - CA264_01245 0.34 -0.8 295,811 + CA264_01245 0.39 +0.3 295,812 - CA264_01245 0.39 -0.2 295,812 - CA264_01245 0.39 -0.3 295,843 + CA264_01245 0.42 +0.0 295,855 + CA264_01245 0.43 +0.0 295,926 + CA264_01245 0.49 +0.3 295,930 + CA264_01245 0.49 -0.2 295,971 + CA264_01245 0.53 +0.4 295,971 + CA264_01245 0.53 +0.2 296,342 + CA264_01245 0.84 +0.4 296,390 - CA264_01245 0.88 +0.0 296,400 - CA264_01245 0.89 -0.7 296,452 + -0.0 296,453 - -0.1 296,454 + -0.5 296,454 + +0.0 296,454 + -1.0 296,455 - -1.8 296,455 - -0.3 296,459 - -0.9 296,459 - -0.2 296,460 + -0.8 296,460 + -0.9 296,461 - -0.2 296,520 + -0.5 296,520 + +0.2 296,564 + +0.0 296,588 - -0.3 296,639 + -0.9 296,646 + +0.1 296,738 + -0.4 296,738 + +0.5 296,738 + -2.9 296,739 - -0.8 296,739 - +0.3 296,739 - -0.3 296,775 + -0.4 296,780 + -1.4 296,780 + -1.6 296,788 + -0.1 296,837 + -0.6 296,838 - -0.2 296,949 - -0.3 296,977 + +0.0 296,978 - -0.7 297,183 + CA264_01250 0.16 +0.7 297,196 - CA264_01250 0.16 +2.1 297,245 + CA264_01250 0.18 -0.2 297,246 + CA264_01250 0.18 +0.1 297,248 + CA264_01250 0.18 +0.4 297,270 - CA264_01250 0.19 +0.3 297,286 - CA264_01250 0.19 -0.0 297,336 - CA264_01250 0.21 -0.2 297,337 + CA264_01250 0.21 +0.6 297,352 + CA264_01250 0.21 -1.9 297,385 + CA264_01250 0.22 +0.1 297,498 - CA264_01250 0.26 +0.3 297,635 - CA264_01250 0.30 +0.2 297,719 + CA264_01250 0.32 -0.5 297,720 - CA264_01250 0.32 -0.5 297,720 - CA264_01250 0.32 -1.9 297,734 + CA264_01250 0.33 -0.6 297,735 - CA264_01250 0.33 +0.0 297,737 + CA264_01250 0.33 -0.6 297,737 + CA264_01250 0.33 +1.7 297,781 + CA264_01250 0.34 -0.0 297,782 - CA264_01250 0.34 -0.1 297,799 + CA264_01250 0.35 -0.6 297,919 + CA264_01250 0.38 -0.2 297,919 + CA264_01250 0.38 +0.3 297,920 - CA264_01250 0.38 +0.2 297,920 - CA264_01250 0.38 +0.6 297,920 - CA264_01250 0.38 +1.0 297,923 - CA264_01250 0.38 -0.7 297,923 - CA264_01250 0.38 +1.1 297,923 - CA264_01250 0.38 -0.4 297,942 + CA264_01250 0.39 -0.5 297,943 - CA264_01250 0.39 -0.3 298,015 - CA264_01250 0.41 -0.4 298,094 + CA264_01250 0.44 +0.1 298,094 + CA264_01250 0.44 -0.3 298,095 - CA264_01250 0.44 -0.5 298,095 - CA264_01250 0.44 -0.4 298,270 + CA264_01250 0.49 -0.3 298,296 - CA264_01250 0.50 -1.7 298,310 + CA264_01250 0.50 +0.0 298,320 + CA264_01250 0.50 +0.1 298,320 + CA264_01250 0.50 -1.2 298,320 + CA264_01250 0.50 -0.6 298,320 + CA264_01250 0.50 -1.2 298,320 + CA264_01250 0.50 +0.1 298,320 + CA264_01250 0.50 +0.4 298,370 + CA264_01250 0.52 -0.2 298,370 + CA264_01250 0.52 +0.5 298,479 + CA264_01250 0.55 +0.0 298,479 + CA264_01250 0.55 -0.3 298,480 - CA264_01250 0.55 -0.0 298,480 - CA264_01250 0.55 -2.5 298,481 + CA264_01250 0.55 -0.3 298,481 + CA264_01250 0.55 -0.4 298,481 + CA264_01250 0.55 +1.4 298,481 + CA264_01250 0.55 -0.2 298,482 - CA264_01250 0.55 -0.2 298,482 - CA264_01250 0.55 -0.2 298,482 - CA264_01250 0.55 +0.9 298,482 - CA264_01250 0.55 +1.1 298,484 + CA264_01250 0.55 -0.8 298,485 - CA264_01250 0.55 -0.9 298,485 - CA264_01250 0.55 -0.8 298,485 - CA264_01250 0.55 -0.3 298,545 - CA264_01250 0.57 -0.6 298,553 + CA264_01250 0.57 -0.8 298,553 + CA264_01250 0.57 -0.2 298,554 - CA264_01250 0.58 +0.2 298,554 - CA264_01250 0.58 +0.5 298,575 + CA264_01250 0.58 -0.2 298,576 - CA264_01250 0.58 -0.4 298,576 - CA264_01250 0.58 -1.0 298,576 - CA264_01250 0.58 +0.3 298,576 - CA264_01250 0.58 -0.1 298,584 + CA264_01250 0.58 -0.4 298,649 + CA264_01250 0.60 -0.1 298,649 + CA264_01250 0.60 -0.3 298,685 + CA264_01250 0.61 -0.3 298,722 - CA264_01250 0.63 -0.9 298,784 + CA264_01250 0.64 -0.2 298,784 + CA264_01250 0.64 -0.1 298,785 - CA264_01250 0.65 +0.1 298,785 - CA264_01250 0.65 -0.7 298,922 + CA264_01250 0.69 +0.1 298,922 + CA264_01250 0.69 +0.0 298,923 - CA264_01250 0.69 +0.4 298,973 - CA264_01250 0.70 -0.1 299,234 - CA264_01250 0.78 -0.7 299,305 - CA264_01250 0.80 +1.4 299,307 - CA264_01250 0.80 -1.5 299,343 - CA264_01250 0.81 -0.1 299,345 + CA264_01250 0.81 +0.4 299,345 + CA264_01250 0.81 -0.5 299,346 - CA264_01250 0.82 -0.1 299,346 - CA264_01250 0.82 -1.2 299,346 - CA264_01250 0.82 +0.5 299,346 - CA264_01250 0.82 -0.1 299,346 - CA264_01250 0.82 -0.4 299,351 + CA264_01250 0.82 -0.1 299,351 + CA264_01250 0.82 +0.6 299,352 - CA264_01250 0.82 -0.2 299,444 + CA264_01250 0.84 -0.8 299,445 - CA264_01250 0.85 -0.1 299,445 - CA264_01250 0.85 -0.7 299,507 + CA264_01250 0.86 -0.4 299,562 + CA264_01250 0.88 -0.8 299,631 + +1.4 299,732 + -0.1 299,733 - -0.8 299,733 - -0.2 299,733 - +0.6 299,733 - -0.8 299,785 + -0.7 299,799 + -0.4 299,800 - -1.3 299,800 - -0.2 299,929 + -1.5 299,930 - -1.9 299,931 + -0.8 299,932 - -0.2 299,940 - -0.6 299,960 - -0.5 299,972 - -1.0 299,988 + -0.5 299,989 - +0.1 300,001 + -0.5 300,043 + +1.0 300,043 + +0.9 300,075 - -0.6 300,092 + +0.8 300,092 + -0.0 300,092 + +0.0 300,093 - -0.8 300,093 - -0.3 300,093 - +0.4 300,096 + -0.9 300,109 - -0.0 300,128 + -0.3 300,134 + +0.2 300,135 - -0.3 300,172 + -0.1 300,236 + -0.9 300,236 + +0.4 300,236 + -0.4 300,236 + -0.4 300,237 - +0.2 300,402 + CA264_01255 0.13 -1.3 300,402 + CA264_01255 0.13 -0.2 300,402 + CA264_01255 0.13 +2.1 300,403 - CA264_01255 0.13 +0.9 300,403 - CA264_01255 0.13 -1.8 300,521 + CA264_01255 0.19 -0.2 300,522 - CA264_01255 0.19 +1.8 300,522 - CA264_01255 0.19 +1.6 300,543 + CA264_01255 0.20 -0.1 300,544 - CA264_01255 0.20 -1.0 300,635 + CA264_01255 0.24 -0.7 300,654 + CA264_01255 0.25 -0.3 300,678 - CA264_01255 0.26 -0.3 300,732 - CA264_01255 0.29 -0.1 300,806 + CA264_01255 0.33 -0.8 300,807 - CA264_01255 0.33 -0.5 300,840 + CA264_01255 0.34 -0.7 300,841 - CA264_01255 0.34 +0.1 300,903 - CA264_01255 0.37 -0.6 300,906 - CA264_01255 0.37 -0.8
Or see this region's nucleotide sequence