Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00870 and CA264_00875 are separated by 20 nucleotides CA264_00875 and CA264_00880 are separated by 258 nucleotides CA264_00880 and CA264_00885 are separated by 373 nucleotides
CA264_00870: CA264_00870 - DNA translocase FtsK, at 185,314 to 187,944
_00870
CA264_00875: CA264_00875 - cell envelope biogenesis protein LolA, at 187,965 to 188,609
_00875
CA264_00880: CA264_00880 - orotidine 5'-phosphate decarboxylase, at 188,868 to 189,695
_00880
CA264_00885: CA264_00885 - hypothetical protein, at 190,069 to 190,440
_00885
Position (kb) 188
189
190 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 187.950 kb on + strand at 187.951 kb on - strand at 187.951 kb on - strand at 187.953 kb on + strand at 187.953 kb on + strand at 187.954 kb on - strand at 187.984 kb on + strand at 188.073 kb on + strand, within CA264_00875 at 188.178 kb on - strand, within CA264_00875 at 188.232 kb on + strand, within CA264_00875 at 188.232 kb on + strand, within CA264_00875 at 188.232 kb on + strand, within CA264_00875 at 188.322 kb on + strand, within CA264_00875 at 188.322 kb on + strand, within CA264_00875 at 188.324 kb on + strand, within CA264_00875 at 188.335 kb on - strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.337 kb on - strand, within CA264_00875 at 188.346 kb on + strand, within CA264_00875 at 188.390 kb on - strand, within CA264_00875 at 188.431 kb on + strand, within CA264_00875 at 188.439 kb on + strand, within CA264_00875 at 188.440 kb on - strand, within CA264_00875 at 188.504 kb on + strand, within CA264_00875 at 188.505 kb on - strand, within CA264_00875 at 188.509 kb on - strand, within CA264_00875 at 188.510 kb on + strand, within CA264_00875 at 188.559 kb on - strand at 188.578 kb on - strand at 188.578 kb on - strand at 188.579 kb on + strand at 188.603 kb on - strand at 188.608 kb on - strand at 188.622 kb on + strand at 188.623 kb on - strand at 188.627 kb on + strand at 188.665 kb on + strand at 188.669 kb on + strand at 188.757 kb on + strand at 188.757 kb on + strand at 188.758 kb on - strand at 188.758 kb on - strand at 188.780 kb on + strand at 188.780 kb on + strand at 188.843 kb on + strand at 188.844 kb on - strand at 188.914 kb on - strand at 189.036 kb on + strand, within CA264_00880 at 189.036 kb on + strand, within CA264_00880 at 189.037 kb on - strand, within CA264_00880 at 189.057 kb on + strand, within CA264_00880 at 189.058 kb on - strand, within CA264_00880 at 189.232 kb on - strand, within CA264_00880 at 189.361 kb on - strand, within CA264_00880 at 189.421 kb on - strand, within CA264_00880 at 189.448 kb on - strand, within CA264_00880 at 189.594 kb on + strand, within CA264_00880 at 189.594 kb on + strand, within CA264_00880 at 189.595 kb on - strand, within CA264_00880 at 189.699 kb on + strand at 189.699 kb on + strand at 189.699 kb on + strand at 189.699 kb on + strand at 189.700 kb on - strand at 189.714 kb on - strand at 189.773 kb on + strand at 189.774 kb on - strand at 189.774 kb on - strand at 189.779 kb on + strand at 189.779 kb on + strand at 189.779 kb on + strand at 189.782 kb on + strand at 189.783 kb on - strand at 189.792 kb on - strand at 189.798 kb on + strand at 189.798 kb on + strand at 189.911 kb on + strand at 189.912 kb on - strand at 189.921 kb on + strand at 189.982 kb on + strand at 189.982 kb on + strand at 189.983 kb on - strand at 189.983 kb on - strand at 189.989 kb on + strand at 190.047 kb on + strand at 190.047 kb on + strand at 190.048 kb on - strand at 190.048 kb on - strand at 190.048 kb on - strand at 190.052 kb on - strand at 190.063 kb on + strand at 190.097 kb on + strand at 190.098 kb on - strand at 190.099 kb on + strand at 190.100 kb on - strand at 190.102 kb on - strand at 190.122 kb on + strand, within CA264_00885 at 190.123 kb on - strand, within CA264_00885 at 190.137 kb on - strand, within CA264_00885 at 190.152 kb on - strand, within CA264_00885 at 190.157 kb on + strand, within CA264_00885 at 190.158 kb on - strand, within CA264_00885 at 190.194 kb on + strand, within CA264_00885 at 190.197 kb on + strand, within CA264_00885 at 190.250 kb on - strand, within CA264_00885 at 190.251 kb on + strand, within CA264_00885 at 190.324 kb on + strand, within CA264_00885 at 190.326 kb on + strand, within CA264_00885 at 190.338 kb on + strand, within CA264_00885 at 190.338 kb on + strand, within CA264_00885 at 190.346 kb on + strand, within CA264_00885 at 190.347 kb on - strand, within CA264_00885 at 190.347 kb on - strand, within CA264_00885 at 190.357 kb on + strand, within CA264_00885 at 190.364 kb on - strand, within CA264_00885 at 190.369 kb on - strand, within CA264_00885 at 190.380 kb on - strand, within CA264_00885 at 190.384 kb on - strand, within CA264_00885 at 190.410 kb on - strand at 190.416 kb on - strand at 190.416 kb on - strand at 190.416 kb on - strand at 190.421 kb on + strand at 190.492 kb on + strand at 190.503 kb on - strand at 190.551 kb on + strand at 190.551 kb on + strand at 190.556 kb on + strand at 190.556 kb on + strand at 190.557 kb on - strand at 190.576 kb on + strand at 190.612 kb on + strand at 190.612 kb on + strand at 190.631 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 187,950 + +0.4 187,951 - -0.2 187,951 - -0.7 187,953 + -0.4 187,953 + -0.8 187,954 - -0.0 187,984 + -1.0 188,073 + CA264_00875 0.17 -1.4 188,178 - CA264_00875 0.33 -2.3 188,232 + CA264_00875 0.41 +0.7 188,232 + CA264_00875 0.41 -1.3 188,232 + CA264_00875 0.41 -0.2 188,322 + CA264_00875 0.55 -2.4 188,322 + CA264_00875 0.55 -1.2 188,324 + CA264_00875 0.56 +0.8 188,335 - CA264_00875 0.57 -2.0 188,336 + CA264_00875 0.58 -1.0 188,336 + CA264_00875 0.58 -1.7 188,336 + CA264_00875 0.58 -0.6 188,336 + CA264_00875 0.58 -1.6 188,336 + CA264_00875 0.58 +0.1 188,336 + CA264_00875 0.58 -0.9 188,337 - CA264_00875 0.58 +0.4 188,346 + CA264_00875 0.59 -2.1 188,390 - CA264_00875 0.66 -1.2 188,431 + CA264_00875 0.72 -1.8 188,439 + CA264_00875 0.73 -1.3 188,440 - CA264_00875 0.74 -0.3 188,504 + CA264_00875 0.84 -2.2 188,505 - CA264_00875 0.84 -0.7 188,509 - CA264_00875 0.84 -2.6 188,510 + CA264_00875 0.84 -1.3 188,559 - -4.1 188,578 - -1.9 188,578 - +0.3 188,579 + -0.2 188,603 - +0.1 188,608 - -0.2 188,622 + +1.1 188,623 - +0.2 188,627 + -0.2 188,665 + +0.7 188,669 + -0.5 188,757 + -1.0 188,757 + -0.7 188,758 - +0.4 188,758 - -0.4 188,780 + +1.1 188,780 + -0.7 188,843 + -1.6 188,844 - +0.7 188,914 - +0.4 189,036 + CA264_00880 0.20 -0.2 189,036 + CA264_00880 0.20 -0.2 189,037 - CA264_00880 0.20 -0.5 189,057 + CA264_00880 0.23 +0.6 189,058 - CA264_00880 0.23 +0.0 189,232 - CA264_00880 0.44 -0.4 189,361 - CA264_00880 0.60 +0.0 189,421 - CA264_00880 0.67 -0.4 189,448 - CA264_00880 0.70 +0.5 189,594 + CA264_00880 0.88 -0.3 189,594 + CA264_00880 0.88 -2.5 189,595 - CA264_00880 0.88 -0.2 189,699 + -0.6 189,699 + -1.0 189,699 + +0.0 189,699 + +0.6 189,700 - -0.3 189,714 - -0.4 189,773 + -0.1 189,774 - +0.5 189,774 - +0.3 189,779 + -0.1 189,779 + -0.6 189,779 + +0.6 189,782 + +0.1 189,783 - -0.0 189,792 - +0.8 189,798 + +0.0 189,798 + -2.0 189,911 + -0.1 189,912 - -0.6 189,921 + -0.2 189,982 + -1.0 189,982 + -0.4 189,983 - -0.6 189,983 - +0.1 189,989 + -0.2 190,047 + -0.2 190,047 + +0.1 190,048 - +0.3 190,048 - -0.5 190,048 - -0.6 190,052 - -0.1 190,063 + +0.5 190,097 + +1.2 190,098 - -0.1 190,099 + +0.3 190,100 - -0.0 190,102 - -0.2 190,122 + CA264_00885 0.14 -0.1 190,123 - CA264_00885 0.15 +0.2 190,137 - CA264_00885 0.18 -0.4 190,152 - CA264_00885 0.22 -0.3 190,157 + CA264_00885 0.24 +0.3 190,158 - CA264_00885 0.24 -0.9 190,194 + CA264_00885 0.34 -0.1 190,197 + CA264_00885 0.34 +0.5 190,250 - CA264_00885 0.49 +0.1 190,251 + CA264_00885 0.49 +0.0 190,324 + CA264_00885 0.69 +0.9 190,326 + CA264_00885 0.69 +0.8 190,338 + CA264_00885 0.72 -1.4 190,338 + CA264_00885 0.72 -0.6 190,346 + CA264_00885 0.74 -0.2 190,347 - CA264_00885 0.75 -0.5 190,347 - CA264_00885 0.75 +1.0 190,357 + CA264_00885 0.77 -0.2 190,364 - CA264_00885 0.79 +0.6 190,369 - CA264_00885 0.81 +0.5 190,380 - CA264_00885 0.84 -0.1 190,384 - CA264_00885 0.85 -1.5 190,410 - +1.3 190,416 - -0.1 190,416 - +0.3 190,416 - -1.7 190,421 + -0.3 190,492 + +0.0 190,503 - +0.1 190,551 + -0.0 190,551 + -0.1 190,556 + +0.2 190,556 + +0.1 190,557 - -0.1 190,576 + -0.3 190,612 + +0.4 190,612 + +0.2 190,631 + +0.4
Or see this region's nucleotide sequence