Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00830 and CA264_00835 are separated by 205 nucleotides CA264_00835 and CA264_00840 are separated by 84 nucleotides CA264_00840 and CA264_00845 are separated by 86 nucleotides CA264_00845 and CA264_00850 are separated by 171 nucleotides
CA264_00830: CA264_00830 - ribonuclease HI, at 177,621 to 178,091
_00830
CA264_00835: CA264_00835 - hypothetical protein, at 178,297 to 178,857
_00835
CA264_00840: CA264_00840 - phosphoserine aminotransferase, at 178,942 to 180,003
_00840
CA264_00845: CA264_00845 - type II 3-dehydroquinate dehydratase, at 180,090 to 180,536
_00845
CA264_00850: CA264_00850 - site-specific tyrosine recombinase XerD, at 180,708 to 181,607
_00850
Position (kb) 178
179
180
181 Strain fitness (log2 ratio) -2
-1
0
1
2 at 178.081 kb on - strand at 178.081 kb on - strand at 178.123 kb on + strand at 178.161 kb on + strand at 178.162 kb on - strand at 178.170 kb on + strand at 178.170 kb on + strand at 178.170 kb on + strand at 178.170 kb on + strand at 178.171 kb on - strand at 178.177 kb on - strand at 178.198 kb on + strand at 178.199 kb on - strand at 178.215 kb on + strand at 178.259 kb on - strand at 178.291 kb on + strand at 178.301 kb on - strand at 178.414 kb on + strand, within CA264_00835 at 178.418 kb on - strand, within CA264_00835 at 178.425 kb on - strand, within CA264_00835 at 178.454 kb on - strand, within CA264_00835 at 178.456 kb on + strand, within CA264_00835 at 178.457 kb on - strand, within CA264_00835 at 178.457 kb on - strand, within CA264_00835 at 178.475 kb on + strand, within CA264_00835 at 178.623 kb on + strand, within CA264_00835 at 178.623 kb on + strand, within CA264_00835 at 178.800 kb on + strand, within CA264_00835 at 178.847 kb on - strand at 178.883 kb on + strand at 178.883 kb on + strand at 178.929 kb on + strand at 178.929 kb on + strand at 178.930 kb on - strand at 178.930 kb on - strand at 178.932 kb on - strand at 178.938 kb on + strand at 178.938 kb on + strand at 178.939 kb on - strand at 178.939 kb on - strand at 178.939 kb on - strand at 178.939 kb on - strand at 178.940 kb on + strand at 180.004 kb on - strand at 180.004 kb on - strand at 180.029 kb on - strand at 180.064 kb on + strand at 180.064 kb on + strand at 180.067 kb on + strand at 180.067 kb on + strand at 180.067 kb on + strand at 180.068 kb on - strand at 180.068 kb on - strand at 180.092 kb on - strand at 180.548 kb on + strand at 180.565 kb on + strand at 180.565 kb on + strand at 180.574 kb on - strand at 180.585 kb on - strand at 180.617 kb on - strand at 180.628 kb on - strand at 180.641 kb on + strand at 180.646 kb on - strand at 180.647 kb on + strand at 180.647 kb on + strand at 180.651 kb on + strand at 180.675 kb on + strand at 180.676 kb on - strand at 180.682 kb on + strand at 180.683 kb on - strand at 180.726 kb on - strand at 180.728 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 178,081 - -0.7 178,081 - +0.1 178,123 + -0.3 178,161 + +0.0 178,162 - +1.8 178,170 + +0.6 178,170 + +0.6 178,170 + +0.0 178,170 + +1.4 178,171 - +0.9 178,177 - +0.1 178,198 + -1.6 178,199 - -0.4 178,215 + +0.4 178,259 - -0.1 178,291 + -0.2 178,301 - -1.0 178,414 + CA264_00835 0.21 +0.5 178,418 - CA264_00835 0.22 -0.8 178,425 - CA264_00835 0.23 +0.2 178,454 - CA264_00835 0.28 +1.1 178,456 + CA264_00835 0.28 +0.6 178,457 - CA264_00835 0.29 +2.0 178,457 - CA264_00835 0.29 +0.3 178,475 + CA264_00835 0.32 -0.0 178,623 + CA264_00835 0.58 +1.3 178,623 + CA264_00835 0.58 -0.0 178,800 + CA264_00835 0.90 -0.4 178,847 - +0.7 178,883 + -0.3 178,883 + -0.7 178,929 + -0.7 178,929 + -0.4 178,930 - -0.3 178,930 - +0.3 178,932 - -0.3 178,938 + +0.2 178,938 + -0.2 178,939 - -0.1 178,939 - -0.2 178,939 - +0.0 178,939 - -0.5 178,940 + +0.7 180,004 - -1.5 180,004 - +0.4 180,029 - -0.5 180,064 + -0.0 180,064 + -1.8 180,067 + -0.0 180,067 + -0.3 180,067 + +0.2 180,068 - -0.3 180,068 - +0.2 180,092 - +0.2 180,548 + -0.2 180,565 + +0.5 180,565 + +1.4 180,574 - +0.2 180,585 - -0.7 180,617 - +0.3 180,628 - -0.5 180,641 + +0.6 180,646 - -0.6 180,647 + -0.8 180,647 + -0.1 180,651 + -1.6 180,675 + -0.4 180,676 - -0.2 180,682 + +0.1 180,683 - -0.8 180,726 - -1.6 180,728 - -2.6
Or see this region's nucleotide sequence