Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00560 and CA264_00565 are separated by 59 nucleotides CA264_00565 and CA264_00570 are separated by 219 nucleotides CA264_00570 and CA264_00575 are separated by 122 nucleotides
CA264_00560: CA264_00560 - hypothetical protein, at 124,527 to 124,868
_00560
CA264_00565: CA264_00565 - hypothetical protein, at 124,928 to 125,161
_00565
CA264_00570: CA264_00570 - methionine--tRNA ligase, at 125,381 to 127,420
_00570
CA264_00575: CA264_00575 - MFS transporter, at 127,543 to 128,811
_00575
Position (kb)
125
126
127
128 Strain fitness (log2 ratio)
-2
-1
0
1 at 124.407 kb on - strand at 124.463 kb on - strand at 124.463 kb on - strand at 124.468 kb on + strand at 124.469 kb on - strand at 124.469 kb on - strand at 124.469 kb on - strand at 124.473 kb on + strand at 124.475 kb on + strand at 124.479 kb on + strand at 124.479 kb on + strand at 124.504 kb on + strand at 124.504 kb on + strand at 124.505 kb on - strand at 124.505 kb on - strand at 124.537 kb on - strand at 124.537 kb on - strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.544 kb on - strand at 124.544 kb on - strand at 124.544 kb on - strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.548 kb on - strand at 124.565 kb on - strand, within CA264_00560 at 124.650 kb on + strand, within CA264_00560 at 124.821 kb on + strand, within CA264_00560 at 124.821 kb on + strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.833 kb on + strand, within CA264_00560 at 124.834 kb on - strand at 124.894 kb on - strand at 125.012 kb on + strand, within CA264_00565 at 125.016 kb on + strand, within CA264_00565 at 125.146 kb on + strand at 125.147 kb on - strand at 125.161 kb on + strand at 125.161 kb on + strand at 125.162 kb on - strand at 125.162 kb on - strand at 125.226 kb on - strand at 125.226 kb on - strand at 125.292 kb on + strand at 125.293 kb on - strand at 125.301 kb on - strand at 125.302 kb on + strand at 125.303 kb on - strand at 125.303 kb on - strand at 125.351 kb on - strand at 125.351 kb on - strand at 125.359 kb on - strand at 127.102 kb on + strand, within CA264_00570 at 127.102 kb on + strand, within CA264_00570 at 127.102 kb on + strand, within CA264_00570 at 127.443 kb on + strand at 127.496 kb on + strand at 127.497 kb on - strand at 127.517 kb on - strand at 127.518 kb on + strand at 127.519 kb on - strand at 127.519 kb on - strand at 127.519 kb on - strand at 127.522 kb on + strand at 127.522 kb on + strand at 127.523 kb on - strand at 127.523 kb on - strand at 127.523 kb on - strand at 127.527 kb on + strand at 127.610 kb on - strand at 127.628 kb on + strand at 127.628 kb on + strand at 127.758 kb on - strand, within CA264_00575 at 127.769 kb on + strand, within CA264_00575 at 127.769 kb on + strand, within CA264_00575 at 127.770 kb on - strand, within CA264_00575 at 127.770 kb on - strand, within CA264_00575 at 127.807 kb on - strand, within CA264_00575 at 127.845 kb on + strand, within CA264_00575 at 127.846 kb on - strand, within CA264_00575 at 127.846 kb on - strand, within CA264_00575 at 127.875 kb on + strand, within CA264_00575 at 127.879 kb on + strand, within CA264_00575 at 127.924 kb on + strand, within CA264_00575 at 127.942 kb on - strand, within CA264_00575 at 127.977 kb on - strand, within CA264_00575 at 128.055 kb on + strand, within CA264_00575 at 128.055 kb on + strand, within CA264_00575 at 128.056 kb on - strand, within CA264_00575 at 128.056 kb on - strand, within CA264_00575 at 128.056 kb on - strand, within CA264_00575 at 128.057 kb on + strand, within CA264_00575 at 128.057 kb on + strand, within CA264_00575 at 128.057 kb on + strand, within CA264_00575 at 128.058 kb on - strand, within CA264_00575 at 128.058 kb on - strand, within CA264_00575 at 128.072 kb on + strand, within CA264_00575 at 128.140 kb on + strand, within CA264_00575 at 128.307 kb on - strand, within CA264_00575 at 128.311 kb on + strand, within CA264_00575 at 128.415 kb on - strand, within CA264_00575
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 124,407 - -0.0 124,463 - +0.4 124,463 - +0.6 124,468 + -0.6 124,469 - -0.6 124,469 - +1.1 124,469 - -0.3 124,473 + +0.1 124,475 + +0.3 124,479 + -0.3 124,479 + +0.7 124,504 + +0.6 124,504 + +0.2 124,505 - +1.0 124,505 - +0.5 124,537 - +0.2 124,537 - +0.6 124,543 + +0.6 124,543 + +0.0 124,543 + +0.5 124,543 + -0.2 124,543 + -0.8 124,543 + -0.1 124,543 + +0.1 124,544 - +0.3 124,544 - +0.4 124,544 - +0.5 124,545 + +0.4 124,545 + -0.1 124,545 + +0.7 124,545 + -0.3 124,545 + -0.7 124,546 - +1.0 124,546 - +0.2 124,546 - +0.5 124,546 - -0.5 124,546 - +1.6 124,546 - +0.4 124,546 - +0.3 124,548 - +0.3 124,565 - CA264_00560 0.11 -0.2 124,650 + CA264_00560 0.36 -0.1 124,821 + CA264_00560 0.86 +0.7 124,821 + CA264_00560 0.86 +0.7 124,822 - CA264_00560 0.86 -0.2 124,822 - CA264_00560 0.86 +1.0 124,822 - CA264_00560 0.86 +0.9 124,833 + CA264_00560 0.89 +0.5 124,834 - +0.4 124,894 - -0.3 125,012 + CA264_00565 0.36 -2.4 125,016 + CA264_00565 0.38 -0.5 125,146 + -0.2 125,147 - -0.1 125,161 + -0.4 125,161 + +0.3 125,162 - -0.5 125,162 - +0.7 125,226 - -1.0 125,226 - +1.0 125,292 + -0.1 125,293 - +0.1 125,301 - -1.3 125,302 + -0.1 125,303 - -0.8 125,303 - +0.7 125,351 - -0.3 125,351 - +0.3 125,359 - +1.0 127,102 + CA264_00570 0.84 -1.3 127,102 + CA264_00570 0.84 -0.9 127,102 + CA264_00570 0.84 -0.6 127,443 + -0.8 127,496 + +0.8 127,497 - -1.7 127,517 - +0.9 127,518 + -2.2 127,519 - +0.8 127,519 - -0.6 127,519 - +0.1 127,522 + -0.8 127,522 + -1.8 127,523 - +0.2 127,523 - -0.9 127,523 - +0.1 127,527 + -1.2 127,610 - -0.5 127,628 + -1.0 127,628 + -0.8 127,758 - CA264_00575 0.17 +0.3 127,769 + CA264_00575 0.18 -1.3 127,769 + CA264_00575 0.18 -1.9 127,770 - CA264_00575 0.18 -0.2 127,770 - CA264_00575 0.18 -0.2 127,807 - CA264_00575 0.21 -0.4 127,845 + CA264_00575 0.24 -1.4 127,846 - CA264_00575 0.24 -0.0 127,846 - CA264_00575 0.24 +0.2 127,875 + CA264_00575 0.26 -2.0 127,879 + CA264_00575 0.26 -1.7 127,924 + CA264_00575 0.30 -2.3 127,942 - CA264_00575 0.31 +0.4 127,977 - CA264_00575 0.34 -0.2 128,055 + CA264_00575 0.40 -1.0 128,055 + CA264_00575 0.40 -1.8 128,056 - CA264_00575 0.40 -0.1 128,056 - CA264_00575 0.40 -0.2 128,056 - CA264_00575 0.40 +0.2 128,057 + CA264_00575 0.41 -0.5 128,057 + CA264_00575 0.41 -2.2 128,057 + CA264_00575 0.41 -2.3 128,058 - CA264_00575 0.41 +1.2 128,058 - CA264_00575 0.41 -0.6 128,072 + CA264_00575 0.42 -1.4 128,140 + CA264_00575 0.47 -1.9 128,307 - CA264_00575 0.60 +0.4 128,311 + CA264_00575 0.61 -1.4 128,415 - CA264_00575 0.69 -0.6
Or see this region's nucleotide sequence