Experiment: m.b. Cobalt chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00190 and CA264_00195 are separated by 88 nucleotides CA264_00195 and CA264_00200 are separated by 41 nucleotides CA264_00200 and CA264_00205 are separated by 43 nucleotides
CA264_00190: CA264_00190 - RagB/SusD family nutrient uptake outer membrane protein, at 49,376 to 50,896
_00190
CA264_00195: CA264_00195 - ribonuclease HII, at 50,985 to 51,584
_00195
CA264_00200: CA264_00200 - response regulator, at 51,626 to 52,060
_00200
CA264_00205: CA264_00205 - histidine kinase, at 52,104 to 53,585
_00205
Position (kb)
50
51
52 Strain fitness (log2 ratio)
-1
0
1
2 at 50.021 kb on - strand, within CA264_00190 at 50.039 kb on - strand, within CA264_00190 at 50.099 kb on - strand, within CA264_00190 at 50.159 kb on + strand, within CA264_00190 at 50.163 kb on + strand, within CA264_00190 at 50.163 kb on + strand, within CA264_00190 at 50.164 kb on - strand, within CA264_00190 at 50.164 kb on - strand, within CA264_00190 at 50.164 kb on - strand, within CA264_00190 at 50.217 kb on + strand, within CA264_00190 at 50.217 kb on + strand, within CA264_00190 at 50.218 kb on - strand, within CA264_00190 at 50.218 kb on - strand, within CA264_00190 at 50.234 kb on + strand, within CA264_00190 at 50.247 kb on - strand, within CA264_00190 at 50.247 kb on - strand, within CA264_00190 at 50.247 kb on - strand, within CA264_00190 at 50.255 kb on + strand, within CA264_00190 at 50.255 kb on + strand, within CA264_00190 at 50.255 kb on + strand, within CA264_00190 at 50.273 kb on - strand, within CA264_00190 at 50.287 kb on + strand, within CA264_00190 at 50.288 kb on - strand, within CA264_00190 at 50.321 kb on + strand, within CA264_00190 at 50.322 kb on - strand, within CA264_00190 at 50.322 kb on - strand, within CA264_00190 at 50.350 kb on + strand, within CA264_00190 at 50.350 kb on + strand, within CA264_00190 at 50.386 kb on - strand, within CA264_00190 at 50.430 kb on - strand, within CA264_00190 at 50.434 kb on + strand, within CA264_00190 at 50.434 kb on + strand, within CA264_00190 at 50.434 kb on + strand, within CA264_00190 at 50.434 kb on + strand, within CA264_00190 at 50.434 kb on + strand, within CA264_00190 at 50.434 kb on + strand, within CA264_00190 at 50.435 kb on - strand, within CA264_00190 at 50.435 kb on - strand, within CA264_00190 at 50.435 kb on - strand, within CA264_00190 at 50.435 kb on - strand, within CA264_00190 at 50.436 kb on + strand, within CA264_00190 at 50.436 kb on + strand, within CA264_00190 at 50.462 kb on + strand, within CA264_00190 at 50.463 kb on - strand, within CA264_00190 at 50.463 kb on - strand, within CA264_00190 at 50.519 kb on + strand, within CA264_00190 at 50.520 kb on - strand, within CA264_00190 at 50.598 kb on + strand, within CA264_00190 at 50.599 kb on - strand, within CA264_00190 at 50.601 kb on + strand, within CA264_00190 at 50.641 kb on + strand, within CA264_00190 at 50.666 kb on - strand, within CA264_00190 at 50.666 kb on - strand, within CA264_00190 at 50.753 kb on - strand at 50.753 kb on - strand at 50.753 kb on - strand at 50.894 kb on + strand at 50.894 kb on + strand at 50.894 kb on + strand at 50.894 kb on + strand at 50.898 kb on - strand at 50.970 kb on - strand at 50.971 kb on + strand at 50.972 kb on - strand at 50.972 kb on - strand at 51.010 kb on - strand at 51.010 kb on - strand at 51.082 kb on + strand, within CA264_00195 at 51.083 kb on - strand, within CA264_00195 at 51.083 kb on - strand, within CA264_00195 at 51.083 kb on - strand, within CA264_00195 at 51.113 kb on - strand, within CA264_00195 at 51.227 kb on + strand, within CA264_00195 at 51.228 kb on - strand, within CA264_00195 at 51.235 kb on + strand, within CA264_00195 at 51.235 kb on + strand, within CA264_00195 at 51.235 kb on + strand, within CA264_00195 at 51.236 kb on - strand, within CA264_00195 at 51.295 kb on - strand, within CA264_00195 at 51.373 kb on - strand, within CA264_00195 at 51.373 kb on - strand, within CA264_00195 at 51.457 kb on - strand, within CA264_00195 at 51.694 kb on + strand, within CA264_00200 at 51.796 kb on + strand, within CA264_00200 at 51.862 kb on + strand, within CA264_00200 at 51.863 kb on - strand, within CA264_00200 at 51.897 kb on - strand, within CA264_00200 at 51.957 kb on + strand, within CA264_00200 at 52.040 kb on - strand at 52.062 kb on - strand at 52.064 kb on - strand at 52.064 kb on - strand at 52.064 kb on - strand at 52.283 kb on + strand, within CA264_00205 at 52.284 kb on - strand, within CA264_00205 at 52.397 kb on - strand, within CA264_00205 at 52.400 kb on + strand, within CA264_00205 at 52.401 kb on - strand, within CA264_00205 at 52.401 kb on - strand, within CA264_00205 at 52.444 kb on - strand, within CA264_00205 at 52.444 kb on - strand, within CA264_00205 at 52.446 kb on - strand, within CA264_00205 at 52.467 kb on + strand, within CA264_00205
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.3 mM remove 50,021 - CA264_00190 0.42 +0.6 50,039 - CA264_00190 0.44 -0.4 50,099 - CA264_00190 0.48 -0.0 50,159 + CA264_00190 0.51 +0.1 50,163 + CA264_00190 0.52 -1.2 50,163 + CA264_00190 0.52 -0.3 50,164 - CA264_00190 0.52 +0.8 50,164 - CA264_00190 0.52 +0.3 50,164 - CA264_00190 0.52 +1.0 50,217 + CA264_00190 0.55 +0.2 50,217 + CA264_00190 0.55 -1.0 50,218 - CA264_00190 0.55 +1.8 50,218 - CA264_00190 0.55 -0.1 50,234 + CA264_00190 0.56 -0.0 50,247 - CA264_00190 0.57 -1.2 50,247 - CA264_00190 0.57 +1.0 50,247 - CA264_00190 0.57 +0.9 50,255 + CA264_00190 0.58 +1.1 50,255 + CA264_00190 0.58 +0.2 50,255 + CA264_00190 0.58 +0.4 50,273 - CA264_00190 0.59 +0.2 50,287 + CA264_00190 0.60 +2.4 50,288 - CA264_00190 0.60 +0.1 50,321 + CA264_00190 0.62 +0.6 50,322 - CA264_00190 0.62 +1.1 50,322 - CA264_00190 0.62 +0.1 50,350 + CA264_00190 0.64 +0.3 50,350 + CA264_00190 0.64 -0.8 50,386 - CA264_00190 0.66 +0.2 50,430 - CA264_00190 0.69 +0.1 50,434 + CA264_00190 0.70 +0.1 50,434 + CA264_00190 0.70 +0.2 50,434 + CA264_00190 0.70 -0.1 50,434 + CA264_00190 0.70 +1.1 50,434 + CA264_00190 0.70 +0.4 50,434 + CA264_00190 0.70 +0.5 50,435 - CA264_00190 0.70 +1.1 50,435 - CA264_00190 0.70 +1.4 50,435 - CA264_00190 0.70 -0.0 50,435 - CA264_00190 0.70 -0.6 50,436 + CA264_00190 0.70 +0.8 50,436 + CA264_00190 0.70 +1.0 50,462 + CA264_00190 0.71 -0.6 50,463 - CA264_00190 0.71 +0.0 50,463 - CA264_00190 0.71 -0.0 50,519 + CA264_00190 0.75 +1.3 50,520 - CA264_00190 0.75 +0.0 50,598 + CA264_00190 0.80 +0.1 50,599 - CA264_00190 0.80 +0.1 50,601 + CA264_00190 0.81 +0.2 50,641 + CA264_00190 0.83 +1.0 50,666 - CA264_00190 0.85 +0.5 50,666 - CA264_00190 0.85 +0.1 50,753 - -1.4 50,753 - +0.9 50,753 - -0.4 50,894 + -0.1 50,894 + +0.5 50,894 + -0.7 50,894 + +0.5 50,898 - +0.8 50,970 - -1.6 50,971 + +0.1 50,972 - +0.3 50,972 - -0.0 51,010 - -0.4 51,010 - -0.9 51,082 + CA264_00195 0.16 +1.3 51,083 - CA264_00195 0.16 +0.8 51,083 - CA264_00195 0.16 +0.4 51,083 - CA264_00195 0.16 -0.1 51,113 - CA264_00195 0.21 +0.5 51,227 + CA264_00195 0.40 +0.1 51,228 - CA264_00195 0.41 +1.4 51,235 + CA264_00195 0.42 -0.3 51,235 + CA264_00195 0.42 -0.3 51,235 + CA264_00195 0.42 -0.1 51,236 - CA264_00195 0.42 -0.6 51,295 - CA264_00195 0.52 -0.8 51,373 - CA264_00195 0.65 +1.3 51,373 - CA264_00195 0.65 -0.4 51,457 - CA264_00195 0.79 -1.6 51,694 + CA264_00200 0.16 -0.3 51,796 + CA264_00200 0.39 -0.5 51,862 + CA264_00200 0.54 -0.4 51,863 - CA264_00200 0.54 -0.3 51,897 - CA264_00200 0.62 -0.1 51,957 + CA264_00200 0.76 -1.2 52,040 - -0.1 52,062 - -0.2 52,064 - +1.2 52,064 - +0.2 52,064 - -0.2 52,283 + CA264_00205 0.12 -0.8 52,284 - CA264_00205 0.12 -0.9 52,397 - CA264_00205 0.20 -1.0 52,400 + CA264_00205 0.20 +0.5 52,401 - CA264_00205 0.20 -0.5 52,401 - CA264_00205 0.20 +0.0 52,444 - CA264_00205 0.23 +1.1 52,444 - CA264_00205 0.23 -1.0 52,446 - CA264_00205 0.23 -1.0 52,467 + CA264_00205 0.24 +1.0
Or see this region's nucleotide sequence