Strain Fitness in Agrobacterium fabrum C58 around Atu4638

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,789,150	-		Atu4637	0.31	-0.0
1,789,184	-		Atu4637	0.34	+0.8
1,789,285	+		Atu4637	0.42	-0.3
1,789,359	-		Atu4637	0.49	-0.3
1,789,425	-		Atu4637	0.54	+0.8
1,789,425	-		Atu4637	0.54	+0.1
1,789,462	+		Atu4637	0.58	-1.5
1,789,498	+		Atu4637	0.61	+0.4
1,789,508	+		Atu4637	0.61	-0.0
1,789,508	+		Atu4637	0.61	-0.1
1,789,508	+		Atu4637	0.61	+0.1
1,789,508	+		Atu4637	0.61	+0.3
1,789,508	+		Atu4637	0.61	-2.1
1,789,508	+		Atu4637	0.61	+0.3
1,789,508	+		Atu4637	0.61	+0.3
1,789,516	-		Atu4637	0.62	+0.3
1,789,516	-		Atu4637	0.62	-0.8
1,789,516	-		Atu4637	0.62	-1.6
1,789,516	-		Atu4637	0.62	-1.0
1,789,516	-		Atu4637	0.62	+0.6
1,789,516	-		Atu4637	0.62	+0.2
1,789,516	-		Atu4637	0.62	-0.4
1,789,516	-		Atu4637	0.62	-0.3
1,789,516	-		Atu4637	0.62	-0.8
1,789,627	+		Atu4637	0.72	+0.7
1,789,636	+		Atu4637	0.73	+0.4
1,789,690	+		Atu4637	0.77	-0.1
1,789,913	+				-0.1
1,789,931	+				+0.2
1,790,027	+				-1.4
1,790,030	-				+0.0
1,790,059	-				+0.3
1,790,061	+				+0.2
1,790,069	-				+0.8
1,790,261	+		Atu4638	0.19	+0.3
1,790,310	-		Atu4638	0.26	+0.2
1,790,320	+		Atu4638	0.28	-2.0
1,790,320	+		Atu4638	0.28	-0.2
1,790,328	-		Atu4638	0.29	+0.3
1,790,483	-		Atu4638	0.52	+0.2
1,790,483	-		Atu4638	0.52	+0.0
1,790,588	-		Atu4638	0.67	+0.0
1,790,595	+		Atu4638	0.68	+0.1
1,790,713	+		Atu4638	0.86	-0.5
1,790,721	-		Atu4638	0.87	-0.2
1,790,721	-		Atu4638	0.87	+0.5
1,790,738	-		Atu4638	0.90	-0.2
1,790,738	-		Atu4638	0.90	-0.2
1,790,810	+				-0.0
1,790,815	+				-0.5
1,790,823	-				+1.0
1,790,834	+				-0.6
1,790,910	-				-0.3
1,790,957	+		Atu4639	0.11	+0.1
1,790,975	-		Atu4639	0.13	-0.6
1,791,058	+		Atu4639	0.19	-0.0
1,791,151	+		Atu4639	0.26	-0.4
1,791,159	-		Atu4639	0.27	+0.3
1,791,184	-		Atu4639	0.28	-2.5
1,791,210	-		Atu4639	0.30	+0.3
1,791,274	+		Atu4639	0.35	-1.1
1,791,332	-		Atu4639	0.40	+0.5
1,791,332	-		Atu4639	0.40	+0.1
1,791,337	-		Atu4639	0.40	-0.1
1,791,383	+		Atu4639	0.43	-0.4
1,791,410	+		Atu4639	0.45	+0.4
1,791,453	+		Atu4639	0.49	+0.8
1,791,490	+		Atu4639	0.51	+0.1
1,791,490	+		Atu4639	0.51	-0.4
1,791,565	+		Atu4639	0.57	-0.5
1,791,598	+		Atu4639	0.59	-0.6
1,791,606	-		Atu4639	0.60	-0.1
1,791,663	+		Atu4639	0.64	-2.3
1,791,701	-		Atu4639	0.67	+0.0
1,791,798	-		Atu4639	0.74	-0.3