Strain Fitness in Agrobacterium fabrum C58 around Atu1115

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,105,524	+		Atu1114	0.57	+0.4
1,105,601	+		Atu1114	0.61	+0.5
1,105,847	+		Atu1114	0.73	-1.1
1,105,937	+		Atu1114	0.78	+0.1
1,106,081	+		Atu1114	0.86	-1.7
1,106,100	-		Atu1114	0.87	+0.2
1,106,126	+		Atu1114	0.88	-0.7
1,106,126	+		Atu1114	0.88	-0.7
1,106,126	+		Atu1114	0.88	-0.6
1,106,134	-		Atu1114	0.88	-0.1
1,106,134	-		Atu1114	0.88	-0.2
1,106,177	-				+0.4
1,106,184	+				-0.1
1,106,297	+				-0.4
1,106,305	-				+0.1
1,106,319	+				+0.7
1,106,362	-				-0.6
1,106,430	+				-0.2
1,106,430	+				-0.4
1,106,435	+				-0.0
1,106,606	-				+0.1
1,106,753	-		Atu1115	0.19	+0.6
1,106,889	-		Atu1115	0.27	+0.0
1,107,033	+		Atu1115	0.35	-0.2
1,107,070	+		Atu1115	0.38	-0.9
1,107,161	+		Atu1115	0.43	+0.7
1,107,270	-		Atu1115	0.50	-0.8
1,107,406	+		Atu1115	0.58	+1.5
1,107,445	-		Atu1115	0.60	+0.0
1,107,511	+		Atu1115	0.64	+0.1
1,107,564	-		Atu1115	0.67	+1.0
1,107,586	-		Atu1115	0.69	+0.6
1,107,654	+		Atu1115	0.73	+0.6
1,107,761	+		Atu1115	0.79	+1.3
1,107,821	-		Atu1115	0.83	+0.1
1,107,978	+				+0.1
1,107,979	+				-0.0
1,107,986	-				-0.8
1,107,986	-				+0.2
1,107,986	-				+0.5
1,107,987	-				+0.1
1,107,987	-				-0.1
1,108,003	+				+1.6
1,108,101	+				-0.0
1,108,163	+				+0.6
1,108,272	-		Atu1116	0.28	+0.3
1,108,313	-		Atu1116	0.34	-0.4
1,108,313	-		Atu1116	0.34	-0.5
1,108,419	-		Atu1116	0.52	-0.5
1,108,562	-		Atu1116	0.75	-0.2
1,108,572	-		Atu1116	0.77	-2.5
1,108,601	-		Atu1116	0.82	-0.5
1,108,681	+				-0.8
1,108,689	-				+0.9
1,108,822	-				+0.2
1,108,871	-		Atu1117	0.14	+1.5
1,108,921	-		Atu1117	0.25	-0.7
1,108,929	-		Atu1117	0.27	+0.2
1,108,941	+		Atu1117	0.29	+0.4
1,108,941	+		Atu1117	0.29	-0.5
1,108,955	+		Atu1117	0.32	-0.0
1,108,956	-		Atu1117	0.32	-0.2
1,108,970	+		Atu1117	0.35	+0.2
1,108,991	-		Atu1117	0.39	+0.3
1,109,009	+		Atu1117	0.43	-0.2
1,109,009	+		Atu1117	0.43	+0.9
1,109,064	+		Atu1117	0.54	+0.3
1,109,072	-		Atu1117	0.56	-0.2
1,109,077	-		Atu1117	0.57	-0.0