Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu1032 and Atu1033 overlap by 4 nucleotides Atu1033 and Atu1034 are separated by 206 nucleotides Atu1034 and Atu1035 overlap by 4 nucleotides Atu1035 and Atu1036 are separated by 83 nucleotides
Atu1032: Atu1032 - hypothetical protein, at 1,025,506 to 1,026,084
Atu1032
Atu1033: Atu1033 - holo-(acyl-carrier Protein) synthase, at 1,026,081 to 1,026,485
Atu1033
Atu1034: Atu1034 - prokaryotic type I signal peptidase, at 1,026,692 to 1,027,438
Atu1034
Atu1035: Atu1035 - ribonuclease III, at 1,027,435 to 1,028,154
Atu1035
Atu1036: Atu1036 - GTP-binding protein, Era family, at 1,028,238 to 1,029,179
Atu1036
Position (kb)
1026
1027
1028 Strain fitness (log2 ratio)
-1
0
1 at 1025.849 kb on + strand, within Atu1032 at 1025.855 kb on + strand, within Atu1032 at 1025.883 kb on + strand, within Atu1032 at 1025.891 kb on - strand, within Atu1032 at 1025.891 kb on - strand, within Atu1032 at 1025.915 kb on - strand, within Atu1032 at 1025.937 kb on - strand, within Atu1032 at 1025.955 kb on - strand, within Atu1032 at 1026.003 kb on - strand, within Atu1032 at 1027.427 kb on + strand at 1027.427 kb on + strand at 1027.427 kb on + strand at 1028.158 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,025,849 + Atu1032 0.59 -1.6 1,025,855 + Atu1032 0.60 +0.0 1,025,883 + Atu1032 0.65 -0.3 1,025,891 - Atu1032 0.66 +0.2 1,025,891 - Atu1032 0.66 -0.6 1,025,915 - Atu1032 0.71 -0.1 1,025,937 - Atu1032 0.74 -1.2 1,025,955 - Atu1032 0.78 +0.5 1,026,003 - Atu1032 0.86 -0.3 1,027,427 + -0.1 1,027,427 + -0.4 1,027,427 + +0.6 1,028,158 + -0.6
Or see this region's nucleotide sequence