Strain Fitness in Agrobacterium fabrum C58 around Atu1003

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
999,854	+		Atu1002	0.43	+0.1
999,862	-		Atu1002	0.43	+0.3
1,000,001	-		Atu1002	0.53	-0.6
1,000,058	-		Atu1002	0.57	-1.0
1,000,336	-		Atu1002	0.77	-0.4
1,000,385	-		Atu1002	0.80	-0.6
1,000,457	+		Atu1002	0.85	+0.0
1,000,547	+				+0.4
1,000,581	-				-0.2
1,000,594	+				+0.1
1,000,878	-		Atu1003	0.30	+0.5
1,000,934	+		Atu1003	0.42	+0.3
1,000,944	+		Atu1003	0.44	+0.7
1,001,041	-		Atu1003	0.65	-0.5
1,001,048	+		Atu1003	0.66	-0.1
1,001,056	-		Atu1003	0.68	+0.5
1,001,107	-		Atu1003	0.79	+0.3
1,001,200	+				+0.2
1,001,208	-				+0.0
1,001,319	+		Atu1004	0.28	-0.5
1,001,343	-		Atu1004	0.34	+0.2
1,001,358	-		Atu1004	0.38	-0.5
1,001,358	-		Atu1004	0.38	-1.0
1,001,530	+		Atu1004	0.82	+0.0
1,001,583	-				+0.0
1,001,616	+				+0.3
1,001,660	-		Atu1005	0.28	+0.4
1,001,704	-		Atu1005	0.47	-0.4