Experiment: an_mag_3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AMB_RS22070 and AMB_RS22075 are separated by 13 nucleotides AMB_RS22075 and AMB_RS23810 are separated by 13 nucleotides AMB_RS23810 and AMB_RS22080 are separated by 2 nucleotides
AMB_RS22070: AMB_RS22070 - cytochrome-c oxidase, cbb3-type subunit I, at 4,765,943 to 4,767,397
_RS22070
AMB_RS22075: AMB_RS22075 - cytochrome-c oxidase, cbb3-type subunit II, at 4,767,411 to 4,768,133
_RS22075
AMB_RS23810: AMB_RS23810 - CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone, at 4,768,147 to 4,768,308
_RS23810
AMB_RS22080: AMB_RS22080 - cytochrome-c oxidase, cbb3-type subunit III, at 4,768,311 to 4,769,171
_RS22080
Position (kb)
4768
4769 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4768.131 kb on + strand at 4768.131 kb on + strand at 4768.131 kb on + strand at 4768.131 kb on + strand at 4768.306 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.169 kb on + strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.170 kb on - strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.177 kb on + strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.178 kb on - strand at 4769.235 kb on - strand at 4769.302 kb on - strand at 4769.302 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction an_mag_3 remove 4,768,131 + -1.6 4,768,131 + +0.7 4,768,131 + -3.0 4,768,131 + -0.0 4,768,306 + -2.2 4,769,169 + -0.6 4,769,169 + -1.2 4,769,169 + -0.1 4,769,169 + -3.1 4,769,169 + +0.4 4,769,169 + -0.6 4,769,169 + -0.2 4,769,169 + -1.6 4,769,169 + -2.0 4,769,169 + -1.2 4,769,169 + +1.4 4,769,169 + -3.4 4,769,169 + +0.4 4,769,169 + -0.6 4,769,169 + +0.4 4,769,169 + -4.4 4,769,169 + -0.2 4,769,169 + -1.8 4,769,169 + +0.4 4,769,169 + +0.4 4,769,169 + -0.6 4,769,169 + -2.4 4,769,169 + -2.2 4,769,169 + -0.4 4,769,169 + -2.2 4,769,169 + +0.4 4,769,169 + -0.8 4,769,169 + -0.6 4,769,169 + -4.5 4,769,169 + -0.6 4,769,169 + +0.4 4,769,169 + -0.4 4,769,169 + -0.1 4,769,169 + -1.6 4,769,169 + -1.2 4,769,169 + -2.0 4,769,169 + -0.2 4,769,169 + -1.1 4,769,169 + -1.6 4,769,169 + -2.2 4,769,169 + -1.8 4,769,169 + -1.2 4,769,170 - -2.6 4,769,170 - +0.4 4,769,170 - -0.6 4,769,170 - -0.6 4,769,170 - -3.8 4,769,170 - -1.6 4,769,170 - -2.0 4,769,170 - -1.6 4,769,170 - -2.0 4,769,170 - -0.6 4,769,170 - -1.0 4,769,170 - -4.3 4,769,170 - -3.2 4,769,170 - -2.4 4,769,170 - -1.2 4,769,170 - -0.6 4,769,170 - -2.9 4,769,170 - +0.5 4,769,170 - -2.4 4,769,177 + +0.4 4,769,177 + -0.6 4,769,177 + -0.6 4,769,177 + +0.2 4,769,177 + -0.6 4,769,177 + -3.0 4,769,177 + -1.6 4,769,177 + -1.6 4,769,177 + +0.4 4,769,177 + -0.5 4,769,177 + -3.0 4,769,177 + +0.4 4,769,177 + -0.2 4,769,177 + -4.6 4,769,177 + +0.1 4,769,177 + -0.2 4,769,177 + +0.4 4,769,177 + +0.1 4,769,177 + -3.7 4,769,177 + -2.2 4,769,177 + -2.9 4,769,177 + -1.2 4,769,177 + -3.4 4,769,177 + +0.4 4,769,177 + -0.6 4,769,177 + -3.1 4,769,177 + -2.6 4,769,177 + -3.3 4,769,177 + +0.9 4,769,177 + -2.0 4,769,177 + -3.0 4,769,177 + -2.8 4,769,177 + -2.4 4,769,177 + -3.4 4,769,177 + -0.4 4,769,177 + -2.8 4,769,178 - +0.2 4,769,178 - -2.4 4,769,178 - +0.4 4,769,178 - -2.4 4,769,178 - +1.4 4,769,178 - -1.2 4,769,178 - +0.4 4,769,178 - -1.2 4,769,178 - -2.6 4,769,178 - -3.2 4,769,178 - +0.1 4,769,178 - +0.1 4,769,178 - -0.2 4,769,178 - -2.4 4,769,178 - +0.2 4,769,178 - -4.1 4,769,178 - -0.6 4,769,178 - -2.6 4,769,178 - -2.9 4,769,178 - -0.6 4,769,178 - -1.8 4,769,178 - -0.6 4,769,178 - +0.4 4,769,178 - -2.6 4,769,178 - -3.2 4,769,178 - +0.4 4,769,178 - -1.2 4,769,178 - +0.4 4,769,178 - -2.6 4,769,235 - -3.0 4,769,302 - -0.2 4,769,302 - -3.0
Or see this region's nucleotide sequence