Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS22040

Experiment: an_mag_3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAMB_RS22035 and AMB_RS22040 are separated by 1 nucleotidesAMB_RS22040 and AMB_RS22045 are separated by 13 nucleotides AMB_RS22035: AMB_RS22035 - membrane protein insertase YidC, at 4,758,330 to 4,760,069 _RS22035 AMB_RS22040: AMB_RS22040 - YihA family ribosome biogenesis GTP-binding protein, at 4,760,071 to 4,760,721 _RS22040 AMB_RS22045: AMB_RS22045 - acetylglutamate kinase, at 4,760,735 to 4,761,637 _RS22045 Position (kb) 4760 4761Strain fitness (log2 ratio) -1 0 1at 4760.067 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction an_mag_3
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4,760,067 + -1.6

Or see this region's nucleotide sequence