Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS20300

Experiment: an_mag_3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAMB_RS20295 and AMB_RS20300 overlap by 1 nucleotidesAMB_RS20300 and AMB_RS20305 are separated by 11 nucleotides AMB_RS20295: AMB_RS20295 - tryptophan synthase subunit beta, at 4,416,972 to 4,418,195 _RS20295 AMB_RS20300: AMB_RS20300 - tryptophan synthase subunit alpha, at 4,418,195 to 4,419,004 _RS20300 AMB_RS20305: AMB_RS20305 - acetyl-CoA carboxylase carboxyltransferase subunit beta, at 4,419,016 to 4,419,942 _RS20305 Position (kb) 4418 4419 4420Strain fitness (log2 ratio) -1 0 1at 4419.985 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction an_mag_3
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4,419,985 + +0.4

Or see this region's nucleotide sequence