Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS08145

Experiment: an_mag_3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAMB_RS08140 and AMB_RS08145 are separated by 9 nucleotidesAMB_RS08145 and AMB_RS08150 are separated by 154 nucleotides AMB_RS08140: AMB_RS08140 - aspartate kinase, at 1,737,840 to 1,739,060 _RS08140 AMB_RS08145: AMB_RS08145 - 2-nitropropane dioxygenase, at 1,739,070 to 1,740,119 _RS08145 AMB_RS08150: AMB_RS08150 - phosphoenolpyruvate--protein phosphotransferase, at 1,740,274 to 1,742,547 _RS08150 Position (kb) 1739 1740 1741Strain fitness (log2 ratio) -1 0 1at 1740.422 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction an_mag_3
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1,740,422 - +1.1

Or see this region's nucleotide sequence