Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS02750

Experiment: an_mag_3

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAMB_RS02745 and AMB_RS02750 overlap by 4 nucleotidesAMB_RS02750 and AMB_RS02755 are separated by 321 nucleotides AMB_RS02745: AMB_RS02745 - nitrite reductase large subunit, at 576,100 to 578,559 _RS02745 AMB_RS02750: AMB_RS02750 - nitrate ABC transporter, at 578,556 to 579,779 _RS02750 AMB_RS02755: AMB_RS02755 - nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein, at 580,101 to 581,762 _RS02755 Position (kb) 578 579 580Strain fitness (log2 ratio) -1 0 1at 580.133 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction an_mag_3
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580,133 - -1.2

Or see this region's nucleotide sequence