Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS00475

Experiment: an_mag_3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	an_mag_3
103,912	+				-3.8
103,912	+				+0.3
103,912	+				+0.0
103,912	+				+0.3
103,912	+				+0.3
103,912	+				-1.5
103,912	+				-2.8
103,912	+				-1.7
103,913	-				-1.7
103,913	-				+0.3
103,913	-				-1.7
103,913	-				-0.7
103,913	-				-1.7
103,913	-				-0.7
103,913	-				-0.7
103,913	-				-2.5
103,913	-				-0.7
103,913	-				+0.6
103,913	-				-1.7
103,981	+				-1.3
103,981	+				-0.7
103,982	-				-2.3
103,982	-				-1.3
103,988	+				-1.0
103,989	-				+0.3
103,989	-				-0.7
103,989	-				-1.3
103,989	-				-0.4
103,989	-				-1.3
103,989	-				-0.1
103,989	-				-1.3
104,026	+		AMB_RS00470	0.12	+0.3
104,026	+		AMB_RS00470	0.12	-0.7
104,027	-		AMB_RS00470	0.13	+0.3
104,027	-		AMB_RS00470	0.13	-2.0
104,027	-		AMB_RS00470	0.13	+0.3
104,090	+		AMB_RS00470	0.19	-1.0
104,090	+		AMB_RS00470	0.19	-1.7
104,090	+		AMB_RS00470	0.19	-3.0
104,090	+		AMB_RS00470	0.19	-1.3
104,090	+		AMB_RS00470	0.19	-1.0
104,090	+		AMB_RS00470	0.19	-0.7
104,091	-		AMB_RS00470	0.19	+0.3
104,091	-		AMB_RS00470	0.19	-2.0
104,091	-		AMB_RS00470	0.19	-1.3
104,091	-		AMB_RS00470	0.19	-2.0
104,170	+		AMB_RS00470	0.28	-0.7
104,171	-		AMB_RS00470	0.28	-1.7
104,171	-		AMB_RS00470	0.28	-1.3
104,245	-		AMB_RS00470	0.36	-1.3
104,245	-		AMB_RS00470	0.36	-0.7
104,248	+		AMB_RS00470	0.36	+0.3
104,248	+		AMB_RS00470	0.36	-2.3
104,248	+		AMB_RS00470	0.36	-1.3
104,249	-		AMB_RS00470	0.36	-1.3
104,249	-		AMB_RS00470	0.36	+0.3
104,249	-		AMB_RS00470	0.36	-1.7
104,249	-		AMB_RS00470	0.36	-0.7
104,249	-		AMB_RS00470	0.36	+0.3
104,249	-		AMB_RS00470	0.36	+0.3
104,249	-		AMB_RS00470	0.36	-0.7
104,265	+		AMB_RS00470	0.38	-0.9
104,265	+		AMB_RS00470	0.38	-0.7
104,265	+		AMB_RS00470	0.38	-0.5
104,265	+		AMB_RS00470	0.38	-2.3
104,265	+		AMB_RS00470	0.38	+0.3
104,266	-		AMB_RS00470	0.38	+1.3
104,266	-		AMB_RS00470	0.38	-2.0
104,296	+		AMB_RS00470	0.41	-0.7
104,296	+		AMB_RS00470	0.41	-0.7
104,296	+		AMB_RS00470	0.41	+0.3
104,296	+		AMB_RS00470	0.41	-0.7
104,297	-		AMB_RS00470	0.41	+0.3
104,297	-		AMB_RS00470	0.41	+0.2
104,297	-		AMB_RS00470	0.41	-0.1
104,297	-		AMB_RS00470	0.41	-1.3
104,297	-		AMB_RS00470	0.41	-0.7
104,297	-		AMB_RS00470	0.41	+0.3
104,297	-		AMB_RS00470	0.41	-2.0
104,297	-		AMB_RS00470	0.41	+0.3
104,297	-		AMB_RS00470	0.41	-2.5
104,353	+		AMB_RS00470	0.47	-0.7
104,353	+		AMB_RS00470	0.47	-1.3
104,353	+		AMB_RS00470	0.47	-0.7
104,353	+		AMB_RS00470	0.47	-1.3
104,353	+		AMB_RS00470	0.47	-0.7
104,353	+		AMB_RS00470	0.47	-3.7
104,353	+		AMB_RS00470	0.47	-2.0
104,353	+		AMB_RS00470	0.47	-1.3
104,353	+		AMB_RS00470	0.47	-0.7
104,354	-		AMB_RS00470	0.47	-0.2
104,354	-		AMB_RS00470	0.47	-2.3
104,354	-		AMB_RS00470	0.47	-2.0
104,354	-		AMB_RS00470	0.47	-3.0
104,354	-		AMB_RS00470	0.47	-0.7
104,355	+		AMB_RS00470	0.47	+0.3
104,355	+		AMB_RS00470	0.47	-2.0
104,355	+		AMB_RS00470	0.47	+1.3
104,355	+		AMB_RS00470	0.47	-1.7
104,355	+		AMB_RS00470	0.47	-2.5
104,356	-		AMB_RS00470	0.47	-0.7
104,356	-		AMB_RS00470	0.47	-0.4
104,500	-		AMB_RS00470	0.63	-0.7
104,574	+		AMB_RS00470	0.71	+0.3
104,574	+		AMB_RS00470	0.71	-0.1
104,575	-		AMB_RS00470	0.71	-2.0
104,575	-		AMB_RS00470	0.71	+0.2
104,671	+		AMB_RS00470	0.81	-0.7
104,671	+		AMB_RS00470	0.81	-1.3
104,671	+		AMB_RS00470	0.81	-0.4
104,671	+		AMB_RS00470	0.81	-2.7
104,672	-		AMB_RS00470	0.81	-0.7
104,672	-		AMB_RS00470	0.81	+1.3
104,672	-		AMB_RS00470	0.81	-0.4
104,672	-		AMB_RS00470	0.81	-0.7
104,682	-		AMB_RS00470	0.82	-2.0
104,689	-		AMB_RS00470	0.83	+0.3
104,808	+				+0.3
104,809	-				-1.3
104,870	+				-2.0
104,870	+				-0.6
104,870	+				-0.7
104,870	+				-1.7
104,871	-				+0.2
104,871	-				-0.3
104,871	-				-2.0
104,912	+				-2.0
104,913	-				-1.3
104,913	-				-1.3
104,913	-				+0.3
104,913	-				-2.9
104,913	-				+0.3
104,913	-				+0.3
104,916	-				-2.0
104,982	-				-3.0
104,982	-				+0.3
105,057	+		AMB_RS00475	0.14	+0.3
105,057	+		AMB_RS00475	0.14	-1.7
105,058	-		AMB_RS00475	0.14	+0.3
105,058	-		AMB_RS00475	0.14	-1.7
105,085	-		AMB_RS00475	0.15	-2.0
105,085	-		AMB_RS00475	0.15	-1.3
105,085	-		AMB_RS00475	0.15	-2.0
105,146	+		AMB_RS00475	0.20	-1.7
105,147	-		AMB_RS00475	0.20	-0.5
105,147	-		AMB_RS00475	0.20	-2.0
105,147	-		AMB_RS00475	0.20	-2.3
105,147	-		AMB_RS00475	0.20	-0.9
105,147	-		AMB_RS00475	0.20	-0.5
105,172	-		AMB_RS00475	0.21	-2.3
105,172	-		AMB_RS00475	0.21	-0.7
105,193	+		AMB_RS00475	0.23	+0.9
105,194	-		AMB_RS00475	0.23	-0.7
105,220	+		AMB_RS00475	0.25	-0.3
105,220	+		AMB_RS00475	0.25	-1.7
105,220	+		AMB_RS00475	0.25	-2.7
105,221	-		AMB_RS00475	0.25	-1.7
105,302	+		AMB_RS00475	0.30	+0.3
105,302	+		AMB_RS00475	0.30	-1.7
105,302	+		AMB_RS00475	0.30	-1.7
105,302	+		AMB_RS00475	0.30	+0.3
105,302	+		AMB_RS00475	0.30	-1.3
105,303	-		AMB_RS00475	0.30	-2.3
105,395	+		AMB_RS00475	0.36	-2.8
105,396	-		AMB_RS00475	0.36	+0.3
105,407	-		AMB_RS00475	0.37	+0.3
105,429	+		AMB_RS00475	0.39	-0.7
105,430	-		AMB_RS00475	0.39	-0.7
105,430	-		AMB_RS00475	0.39	-0.4
105,554	+		AMB_RS00475	0.47	+0.3
105,554	+		AMB_RS00475	0.47	+0.3
105,554	+		AMB_RS00475	0.47	-1.3
105,555	-		AMB_RS00475	0.47	-3.8
105,555	-		AMB_RS00475	0.47	-2.0
105,555	-		AMB_RS00475	0.47	-0.5
105,556	+		AMB_RS00475	0.47	-1.3
105,556	+		AMB_RS00475	0.47	+0.3
105,556	+		AMB_RS00475	0.47	+0.3
105,556	+		AMB_RS00475	0.47	-0.3
105,556	+		AMB_RS00475	0.47	-0.3
105,556	+		AMB_RS00475	0.47	-0.7
105,556	+		AMB_RS00475	0.47	-2.0
105,557	-		AMB_RS00475	0.47	-1.3
105,557	-		AMB_RS00475	0.47	+0.3
105,557	-		AMB_RS00475	0.47	+0.3
105,569	+		AMB_RS00475	0.48	+0.3
105,572	+		AMB_RS00475	0.48	+0.3
105,573	-		AMB_RS00475	0.48	+0.3
105,573	-		AMB_RS00475	0.48	+0.3
105,725	+		AMB_RS00475	0.58	-0.2
105,726	-		AMB_RS00475	0.59	-1.7
105,726	-		AMB_RS00475	0.59	-0.7
105,726	-		AMB_RS00475	0.59	-1.3
105,726	-		AMB_RS00475	0.59	-3.0
105,729	+		AMB_RS00475	0.59	+0.3
105,729	+		AMB_RS00475	0.59	-3.1
105,729	+		AMB_RS00475	0.59	+0.3
105,729	+		AMB_RS00475	0.59	-0.7
105,730	-		AMB_RS00475	0.59	-0.7
105,730	-		AMB_RS00475	0.59	-0.7
105,731	+		AMB_RS00475	0.59	-2.0
105,731	+		AMB_RS00475	0.59	-1.3
105,731	+		AMB_RS00475	0.59	+0.3
105,731	+		AMB_RS00475	0.59	-0.5
105,731	+		AMB_RS00475	0.59	-1.3
105,731	+		AMB_RS00475	0.59	-1.3
105,731	+		AMB_RS00475	0.59	-1.3
105,731	+		AMB_RS00475	0.59	-0.7
105,731	+		AMB_RS00475	0.59	-0.7
105,731	+		AMB_RS00475	0.59	-2.3
105,731	+		AMB_RS00475	0.59	-0.7
105,731	+		AMB_RS00475	0.59	+0.3
105,731	+		AMB_RS00475	0.59	+0.3
105,731	+		AMB_RS00475	0.59	-0.7
105,731	+		AMB_RS00475	0.59	+0.3
105,731	+		AMB_RS00475	0.59	+1.9
105,731	+		AMB_RS00475	0.59	-0.7
105,732	-		AMB_RS00475	0.59	+0.3
105,732	-		AMB_RS00475	0.59	-0.7
105,732	-		AMB_RS00475	0.59	-1.7
105,732	-		AMB_RS00475	0.59	-0.7
105,732	-		AMB_RS00475	0.59	-1.7
105,732	-		AMB_RS00475	0.59	-0.3
105,732	-		AMB_RS00475	0.59	-1.3
105,732	-		AMB_RS00475	0.59	-0.7
105,732	-		AMB_RS00475	0.59	-0.4
105,732	-		AMB_RS00475	0.59	+0.3
105,732	-		AMB_RS00475	0.59	-1.3
105,732	-		AMB_RS00475	0.59	+0.3
105,732	-		AMB_RS00475	0.59	-3.1
105,732	-		AMB_RS00475	0.59	-1.7
105,732	-		AMB_RS00475	0.59	-2.5
105,732	-		AMB_RS00475	0.59	-0.4
105,790	+		AMB_RS00475	0.63	-1.3
105,790	+		AMB_RS00475	0.63	-2.3
105,790	+		AMB_RS00475	0.63	-2.0
105,791	-		AMB_RS00475	0.63	-1.7
105,830	-		AMB_RS00475	0.66	-1.7
106,064	+		AMB_RS00475	0.81	-1.7
106,064	+		AMB_RS00475	0.81	+0.3
106,118	+		AMB_RS00475	0.85	-0.1
106,118	+		AMB_RS00475	0.85	-1.3
106,119	-		AMB_RS00475	0.85	-0.4
106,303	+				+0.0
106,303	+				-0.7
106,326	+				-1.3
106,346	+				-2.3
106,404	+				-0.3
106,405	-				+0.3
106,405	-				-0.6
106,405	-				-1.3
106,421	+				+0.3
106,422	-				-2.3
106,422	-				+0.3
106,422	-				-0.7
106,422	-				+0.3
106,422	-				-0.4
106,422	-				-1.7
106,430	+				+0.3
106,430	+				+0.3
106,431	-				-1.3
106,431	-				+0.3
106,510	+				-1.7
106,510	+				+0.3
106,511	-				+0.3
106,602	+		AMB_RS00480	0.22	-1.7
106,602	+		AMB_RS00480	0.22	+0.2
106,660	-		AMB_RS00480	0.30	-2.0
106,660	-		AMB_RS00480	0.30	-0.7
106,731	+		AMB_RS00480	0.39	-1.3
106,732	-		AMB_RS00480	0.39	-0.6
106,732	-		AMB_RS00480	0.39	+0.3
106,732	-		AMB_RS00480	0.39	+0.3
106,891	-		AMB_RS00480	0.61	-0.4
106,902	-		AMB_RS00480	0.62	-1.0
106,902	-		AMB_RS00480	0.62	-3.0
106,954	-		AMB_RS00480	0.69	-2.3
106,983	-		AMB_RS00480	0.73	-0.7
107,017	+		AMB_RS00480	0.77	+0.3
107,086	+		AMB_RS00480	0.87	-0.7
107,086	+		AMB_RS00480	0.87	-2.5
107,087	-		AMB_RS00480	0.87	-0.7
107,143	-				-1.2
107,165	-				+0.3
107,304	+				-1.3
107,304	+				-0.1
107,304	+				-0.4
107,305	-				-1.7
107,305	-				+0.3
107,305	-				-3.3
107,305	-				+0.3
107,309	+				-2.0
107,309	+				-3.7
107,309	+				-2.5
107,309	+				-0.7
107,309	+				-0.1
107,309	+				-2.3
107,309	+				+0.3
107,310	-				-1.7
107,310	-				+0.3